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Human Microbiome Project (HMP)

HMP is an NIH initiative aimed at identifying and characterizing the microbial flora of healthy and diseased individuals.

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Items: 1 to 20 of 45081

1.

Introducing insoluble wheat bran as a gut microbiota niche in an in vitro dynamic gut model stimulates propionate and butyrate production and induces colon region specific shifts in the luminal and mucosal microbial community.

De Paepe K, Verspreet J, Verbeke K, Raes J, Courtin CM, Van de Wiele T.

Environ Microbiol. 2018 Aug 20. doi: 10.1111/1462-2920.14381. [Epub ahead of print]

PMID:
30126070
2.

Association of nasal microbiome and asthma control in patients with chronic rhinosinusitis.

Yang HJ, LoSavio PS, Engen PA, Naqib A, Mehta A, Kota R, Khan RJ, Tobin MC, Green SJ, Schleimer RP, Keshavarzian A, Batra PS, Mahdavinia M.

Clin Exp Allergy. 2018 Aug 20. doi: 10.1111/cea.13255. [Epub ahead of print]

PMID:
30126004
3.

Quorum sensing can be repurposed to promote information transfer between bacteria in the mammalian gut.

Kim S, Kerns SJ, Ziesack M, Bry L, Gerber GK, Way JC, Silver PA.

ACS Synth Biol. 2018 Aug 20. doi: 10.1021/acssynbio.8b00271. [Epub ahead of print]

PMID:
30125499
4.

Insights into Pathogenic Interactions Among Environment, Host, and Tumor at the Crossroads of Molecular Pathology and Epidemiology.

Ogino S, Nowak JA, Hamada T, Milner DA, Nishihara R Jr.

Annu Rev Pathol. 2018 Aug 20. doi: 10.1146/annurev-pathmechdis-012418-012818. [Epub ahead of print]

PMID:
30125150
5.

Effects of dietary supplementation of the lignocelluloses FibreCell and OptiCell on performance, expression of inflammation-related genes and the gut microbiome of broilers.

Zeitz JO, Neufeld K, Potthast C, Kroismayr A, Most E, Eder K.

Poult Sci. 2018 Aug 14. doi: 10.3382/ps/pey345. [Epub ahead of print]

PMID:
30124970
6.

Variation in animal performance explained by the rumen microbiome or by diet composition.

Gleason CB, White RR.

J Anim Sci. 2018 Aug 16. doi: 10.1093/jas/sky332. [Epub ahead of print]

PMID:
30124869
7.

A meta-analysis reveals universal gut bacterial signatures for diagnosing the incidence of shrimp disease.

Yu W, Wu JH, Zhang J, Yang W, Chen J, Xiong J.

FEMS Microbiol Ecol. 2018 Oct 1;94(10). doi: 10.1093/femsec/fiy147.

PMID:
30124839
8.

The Microbial Composition of Bacteroidetes Species in Ulcerative Colitis Is Effectively Improved by Combination Therapy With Fecal Microbiota Transplantation and Antibiotics.

Ishikawa D, Sasaki T, Takahashi M, Kuwahara-Arai K, Haga K, Ito S, Okahara K, Nakajima A, Shibuya T, Osada T, Hiramatsu K, Watanabe S, Nagahara A.

Inflamm Bowel Dis. 2018 Aug 14. doi: 10.1093/ibd/izy266. [Epub ahead of print]

PMID:
30124831
9.

Detrimental effect of broad-spectrum antibiotics on intestinal microbiome diversity in patients after allogeneic stem cell transplantation: Lack of commensal sparing antibiotics.

Weber D, Hiergeist A, Weber M, Dettmer K, Wolff D, Hahn J, Herr W, Gessner A, Holler E.

Clin Infect Dis. 2018 Aug 17. doi: 10.1093/cid/ciy711. [Epub ahead of print]

PMID:
30124813
10.

From Culturomics to Clinical Microbiology and Forward.

Dubourg G, Baron S, Cadoret F, Couderc C, Fournier PE, Lagier JC, Raoult D.

Emerg Infect Dis. 2018 Sep;24(9):1683-1690. doi: 10.3201/eid2409.170995.

PMID:
30124405
11.

The use of biomarkers as a tool for novel psoriatic disease drug discovery.

Aggarwal D, Arumalla N, Jethwa H, Abraham S.

Expert Opin Drug Discov. 2018 Aug 20:1-13. doi: 10.1080/17460441.2018.1508206. [Epub ahead of print]

PMID:
30124339
12.

Identification of Novel Cryptic Multifunctional Antimicrobial Peptides from the Human Stomach Enabled by a Computational-Experimental Platform.

Pane K, Cafaro V, Avitabile A, Torres MT, Vollaro A, De Gregorio E, Catania MR, Di Maro A, Bosso A, Gallo G, Zanfardino A, Varcamonti M, Pizzo E, Di Donato A, Lu TK, de la Fuente-Nunez C, Notomista E.

ACS Synth Biol. 2018 Aug 20. doi: 10.1021/acssynbio.8b00084. [Epub ahead of print]

PMID:
30124040
13.

A High-Throughput Organoid Microinjection Platform to Study Gastrointestinal Microbiota and Luminal Physiology.

Williamson IA, Arnold JW, Samsa LA, Gaynor L, DiSalvo M, Cocchiaro JL, Carroll I, Azcarate-Peril MA, Rawls JF, Allbritton NL, Magness ST.

Cell Mol Gastroenterol Hepatol. 2018 May 22;6(3):301-319. doi: 10.1016/j.jcmgh.2018.05.004. eCollection 2018.

PMID:
30123820
14.
15.

The Performance of an Oral Microbiome Biomarker Panel in Predicting Oral Cavity and Oropharyngeal Cancers.

Lim Y, Fukuma N, Totsika M, Kenny L, Morrison M, Punyadeera C.

Front Cell Infect Microbiol. 2018 Aug 3;8:267. doi: 10.3389/fcimb.2018.00267. eCollection 2018.

PMID:
30123780
16.

Denoising the Denoisers: an independent evaluation of microbiome sequence error-correction approaches.

Nearing JT, Douglas GM, Comeau AM, Langille MGI.

PeerJ. 2018 Aug 8;6:e5364. doi: 10.7717/peerj.5364. eCollection 2018.

PMID:
30123705
17.

Endolichenic fungi: the lesser known fungal associates of lichens.

Suryanarayanan TS, Thirunavukkarasu N.

Mycology. 2017 Jul 17;8(3):189-196. doi: 10.1080/21501203.2017.1352048. eCollection 2017.

PMID:
30123639
18.

The Sycamore Maple Bacterial Culture Collection From a TNT Polluted Site Shows Novel Plant-Growth Promoting and Explosives Degrading Bacteria.

Thijs S, Sillen W, Truyens S, Beckers B, van Hamme J, van Dillewijn P, Samyn P, Carleer R, Weyens N, Vangronsveld J.

Front Plant Sci. 2018 Aug 3;9:1134. doi: 10.3389/fpls.2018.01134. eCollection 2018.

PMID:
30123233
19.

Current landscape and future directions of biomarkers for predicting responses to immune checkpoint inhibitors.

Zhu Y, Zhao F, Li Z, Yu J.

Cancer Manag Res. 2018 Aug 7;10:2475-2488. doi: 10.2147/CMAR.S167400. eCollection 2018. Review.

PMID:
30122997
20.

Altered oral microbiota in chronic hepatitis B patients with different tongue coatings.

Zhao Y, Mao YF, Tang YS, Ni MZ, Liu QH, Wang Y, Feng Q, Peng JH, Hu YY.

World J Gastroenterol. 2018 Aug 14;24(30):3448-3461. doi: 10.3748/wjg.v24.i30.3448.

PMID:
30122883

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