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Items: 1 to 20 of 605

1.

Plant host habitat and root exudates shape fungal diversity.

Hugoni M, Luis P, Guyonnet J, Haichar FEZ.

Mycorrhiza. 2018 Aug 15. doi: 10.1007/s00572-018-0857-5. [Epub ahead of print]

PMID:
30109473
2.

Multi-marker metabarcoding approach to study mesozooplankton at basin scale.

Stefanni S, Stanković D, Borme D, de Olazabal A, Juretić T, Pallavicini A, Tirelli V.

Sci Rep. 2018 Aug 14;8(1):12085. doi: 10.1038/s41598-018-30157-7.

3.

A pipeline for metabarcoding and diet analysis from fecal samples developed for a small semi-aquatic mammal.

Hawlitschek O, Fernández-González A, Balmori-de la Puente A, Castresana J.

PLoS One. 2018 Aug 14;13(8):e0201763. doi: 10.1371/journal.pone.0201763. eCollection 2018.

4.

Long-read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments.

Heeger F, Bourne EC, Baschien C, Yurkov A, Bunk B, Spröer C, Overmann J, Mazzoni CJ, Monaghan MT.

Mol Ecol Resour. 2018 Aug 14. doi: 10.1111/1755-0998.12937. [Epub ahead of print]

PMID:
30106226
5.

DNA metabarcoding reveals changes in the contents of carnivorous plants along an elevation gradient.

Littlefair JE, Zander A, de Sena Costa C, Clare EL.

Mol Ecol. 2018 Aug 14. doi: 10.1111/mec.14832. [Epub ahead of print]

PMID:
30106192
6.

Evaluating freshwater macroinvertebrates from eDNA metabarcoding: A river Nalón case study.

Fernández S, Rodríguez S, Martínez JL, Borrell YJ, Ardura A, García-Vázquez E.

PLoS One. 2018 Aug 8;13(8):e0201741. doi: 10.1371/journal.pone.0201741. eCollection 2018.

7.

Seasonally varying marine influences on the coastal ecosystem detected through molecular gut analysis.

Verschut V, Strandmark A, Esparza Salas R, Hambäck PA.

Mol Ecol. 2018 Aug 7. doi: 10.1111/mec.14830. [Epub ahead of print]

PMID:
30084518
8.

A four year survey reveals a coherent pattern between occurrence of fruit bodies and soil amoebae populations for nivicolous myxomycetes.

Dahl MB, Shchepin O, Schunk C, Menzel A, Novozhilov YK, Schnittler M.

Sci Rep. 2018 Aug 3;8(1):11662. doi: 10.1038/s41598-018-30131-3.

9.

Contrasting distribution patterns between aquatic and terrestrial Phytophthora species along a climatic gradient are linked to functional traits.

Redondo MA, Boberg J, Stenlid J, Oliva J.

ISME J. 2018 Aug 2. doi: 10.1038/s41396-018-0229-3. [Epub ahead of print]

PMID:
30072746
10.

Does pollution influence small mammal diet in the field? A metabarcoding approach in a generalist consumer.

Ozaki S, Fritsch C, Valot B, Mora F, Cornier T, Scheifler R, Raoul F.

Mol Ecol. 2018 Aug 2. doi: 10.1111/mec.14823. [Epub ahead of print]

PMID:
30069953
11.

Wild Bee Pollen Usage and Microbial Communities Co-vary Across Landscapes.

McFrederick QS, Rehan SM.

Microb Ecol. 2018 Aug 1. doi: 10.1007/s00248-018-1232-y. [Epub ahead of print]

PMID:
30069710
12.

Structure and function of the global topsoil microbiome.

Bahram M, Hildebrand F, Forslund SK, Anderson JL, Soudzilovskaia NA, Bodegom PM, Bengtsson-Palme J, Anslan S, Coelho LP, Harend H, Huerta-Cepas J, Medema MH, Maltz MR, Mundra S, Olsson PA, Pent M, Põlme S, Sunagawa S, Ryberg M, Tedersoo L, Bork P.

Nature. 2018 Aug;560(7717):233-237. doi: 10.1038/s41586-018-0386-6. Epub 2018 Aug 1.

PMID:
30069051
13.

Ballast water exchange and invasion risk posed by intra-coastal vessel traffic: An evaluation using high throughput sequencing.

Darling J, Martinson J, Gong Y, Okum S, Pilgrim E, Lohan K, Carney KJ, Ruiz G.

Environ Sci Technol. 2018 Jul 30. doi: 10.1021/acs.est.8b02108. [Epub ahead of print]

PMID:
30059206
14.

Newly designed 16S rRNA metabarcoding primers amplify diverse and novel archaeal taxa from the environment.

Bahram M, Anslan S, Hildebrand F, Bork P, Tedersoo L.

Environ Microbiol Rep. 2018 Jul 30. doi: 10.1111/1758-2229.12684. [Epub ahead of print]

PMID:
30058291
15.

A Comparative Study on the Faecal Bacterial Community and Potential Zoonotic Bacteria of Muskoxen (Ovibos moschatus) in Northeast Greenland, Northwest Greenland and Norway.

Andersen-Ranberg EU, Barnes CJ, Rasmussen L, Salgado-Flores A, Grøndahl C, Mosbacher JB, Hansen AJ, Sundset MA, Schmidt NM, Sonne C.

Microorganisms. 2018 Jul 25;6(3). pii: E76. doi: 10.3390/microorganisms6030076.

16.

Finding flies in the mushroom soup: host specificity of fungus-associated communities revisited with a novel molecular method.

Koskinen J, Roslin T, Nyman T, Abrego N, Michell C, Vesterinen EJ.

Mol Ecol. 2018 Jul 24. doi: 10.1111/mec.14810. [Epub ahead of print]

PMID:
30040155
17.

Dynamics of Gut Microbiota Diversity During the Early Development of an Avian Host: Evidence From a Cross-Foster Experiment.

Teyssier A, Lens L, Matthysen E, White J.

Front Microbiol. 2018 Jul 9;9:1524. doi: 10.3389/fmicb.2018.01524. eCollection 2018.

18.

Updating Plakobranchus cf. ianthobapsus (Gastropoda, Sacoglossa) host use: Diverse algal-animal interactions revealed by NGS with implications for invasive species management.

Wade RM, Sherwood AR.

Mol Phylogenet Evol. 2018 Jul 19. pii: S1055-7903(18)30054-X. doi: 10.1016/j.ympev.2018.07.010. [Epub ahead of print]

PMID:
30031771
19.

Slippage of degenerate primers can cause variation in amplicon length.

Elbrecht V, Hebert PDN, Steinke D.

Sci Rep. 2018 Jul 20;8(1):10999. doi: 10.1038/s41598-018-29364-z.

20.

A Comparison of Different Ciliate Metabarcode Genes as Bioindicators for Environmental Impact Assessments of Salmon Aquaculture.

Forster D, Filker S, Kochems R, Breiner HW, Cordier T, Pawlowski J, Stoeck T.

J Eukaryot Microbiol. 2018 Jul 20. doi: 10.1111/jeu.12670. [Epub ahead of print]

PMID:
30028566

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