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A pipeline of programs for collecting and analyzing group II intron retroelement sequences from GenBank.

Abebe M, Candales MA, Duong A, Hood KS, Li T, Neufeld RAE, Shakenov A, Sun R, Wu L, Jarding AM, Semper C, Zimmerly S.

Mob DNA. 2013 Dec 20;4(1):28. doi: 10.1186/1759-8753-4-28.


Analysis of western lowland gorilla (Gorilla gorilla gorilla) specific Alu repeats.

McLain AT, Carman GW, Fullerton ML, Beckstrom TO, Gensler W, Meyer TJ, Faulk C, Batzer MA.

Mob DNA. 2013 Nov 22;4(1):26. doi: 10.1186/1759-8753-4-26.


Identification of three new Alu Yb subfamilies by source tracking of recently integrated Alu Yb elements.

Ahmed M, Li W, Liang P.

Mob DNA. 2013 Nov 12;4(1):25. doi: 10.1186/1759-8753-4-25.


A proposed mechanism for IS607-family serine transposases.

Boocock MR, Rice PA.

Mob DNA. 2013 Nov 6;4(1):24. doi: 10.1186/1759-8753-4-24.


PGBD5: a neural-specific intron-containing piggyBac transposase domesticated over 500 million years ago and conserved from cephalochordates to humans.

Pavelitz T, Gray LT, Padilla SL, Bailey AD, Weiner AM.

Mob DNA. 2013 Nov 1;4(1):23. doi: 10.1186/1759-8753-4-23.


Translocation junctions in TCF3-PBX1 acute lymphoblastic leukemia/lymphoma cluster near transposable elements.

Rodić N, Zampella JG, Cornish TC, Wheelan SJ, Burns KH.

Mob DNA. 2013 Oct 17;4(1):22. doi: 10.1186/1759-8753-4-22.


Transposable element evolution in Heliconius suggests genome diversity within Lepidoptera.

Lavoie CA, Platt RN 2nd, Novick PA, Counterman BA, Ray DA.

Mob DNA. 2013 Oct 2;4(1):21. doi: 10.1186/1759-8753-4-21.


In and out of the rRNA genes: characterization of Pokey elements in the sequenced Daphnia genome.

Elliott TA, Stage DE, Crease TJ, Eickbush TH.

Mob DNA. 2013 Sep 23;4(1):20. doi: 10.1186/1759-8753-4-20.


The Putzig partners DREF, TRF2 and KEN are involved in the regulation of the Drosophila telomere retrotransposons, HeT-A and TART.

Silva-Sousa R, Varela MD, Casacuberta E.

Mob DNA. 2013 Jul 3;4(1):18. doi: 10.1186/1759-8753-4-18.


Nuclear group I introns in self-splicing and beyond.

Hedberg A, Johansen SD.

Mob DNA. 2013 Jun 5;4(1):17. doi: 10.1186/1759-8753-4-17.


LINE-1 and Alu retrotransposition exhibit clonal variation.

Streva VA, Faber ZJ, Deininger PL.

Mob DNA. 2013 Jun 3;4(1):16. doi: 10.1186/1759-8753-4-16.


Regulation of DNA transposition by CpG methylation and chromatin structure in human cells.

Jursch T, Miskey C, Izsvák Z, Ivics Z.

Mob DNA. 2013 May 15;4(1):15. doi: 10.1186/1759-8753-4-15.


Now on display: a gallery of group II intron structures at different stages of catalysis.

Marcia M, Somarowthu S, Pyle AM.

Mob DNA. 2013 May 1;4(1):14. doi: 10.1186/1759-8753-4-14.


Diversity of transposable elements and repeats in a 600 kb region of the fly Calliphora vicina.

Negre B, Simpson P.

Mob DNA. 2013 Apr 3;4(1):13. doi: 10.1186/1759-8753-4-13.


Homologues of bacterial TnpB_IS605 are widespread in diverse eukaryotic transposable elements.

Bao W, Jurka J.

Mob DNA. 2013 Apr 1;4(1):12. doi: 10.1186/1759-8753-4-12.


Correction: Reliable transgene-independent method for determining sleeping beauty transposon copy numbers.

Kolacsek O, Krízsik V, Schamberger A, Erdei Z, Apáti A, Várady G, Mátés L, Izsvák Z, Ivics Z, Sarkadi B, Orbán TI.

Mob DNA. 2013 Mar 15;4(1):11. doi: 10.1186/1759-8753-4-11. No abstract available.


Cell division promotes efficient retrotransposition in a stable L1 reporter cell line.

Xie Y, Mates L, Ivics Z, Izsvák Z, Martin SL, An W.

Mob DNA. 2013 Mar 6;4(1):10. doi: 10.1186/1759-8753-4-10.


Sirevirus LTR retrotransposons: phylogenetic misconceptions in the plant world.

Bousios A, Darzentas N.

Mob DNA. 2013 Mar 4;4(1):9. doi: 10.1186/1759-8753-4-9.

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