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Items: 1 to 20 of 129

1.

DMSO cryopreservation is the method of choice to preserve cells for droplet-based single-cell RNA sequencing.

Wohnhaas CT, Leparc GG, Fernandez-Albert F, Kind D, Gantner F, Viollet C, Hildebrandt T, Baum P.

Sci Rep. 2019 Jul 23;9(1):10699. doi: 10.1038/s41598-019-46932-z.

2.

QuaPra: Efficient transcript assembly and quantification using quadratic programming with Apriori algorithm.

Ji X, Tong W, Ning B, Mason CE, Kreil DP, Labaj PP, Chen G, Shi T.

Sci China Life Sci. 2019 Jul;62(7):937-946. doi: 10.1007/s11427-018-9433-3. Epub 2019 May 22.

PMID:
31124003
3.

Peroral cholangioscopy with cholangioscopy-directed biopsies in the diagnosis of biliary malignancies: a systemic review and meta-analysis.

Badshah MB, Vanar V, Kandula M, Kalva N, Badshah MB, Revenur V, Bechtold ML, Forcione DG, Donthireddy K, Puli SR.

Eur J Gastroenterol Hepatol. 2019 Aug;31(8):935-940. doi: 10.1097/MEG.0000000000001402.

PMID:
30896553
4.

BATLAS: Deconvoluting Brown Adipose Tissue.

Perdikari A, Leparc GG, Balaz M, Pires ND, Lidell ME, Sun W, Fernandez-Albert F, Müller S, Akchiche N, Dong H, Balazova L, Opitz L, Röder E, Klein H, Stefanicka P, Varga L, Nuutila P, Virtanen KA, Niemi T, Taittonen M, Rudofsky G, Ukropec J, Enerbäck S, Stupka E, Neubauer H, Wolfrum C.

Cell Rep. 2018 Oct 16;25(3):784-797.e4. doi: 10.1016/j.celrep.2018.09.044.

5.

The Gpr1-regulated Sur7 family protein Sfp2 is required for hyphal growth and cell wall stability in the mycoparasite Trichoderma atroviride.

Atanasova L, Gruber S, Lichius A, Radebner T, Abendstein L, Münsterkötter M, Stralis-Pavese N, Łabaj PP, Kreil DP, Zeilinger S.

Sci Rep. 2018 Aug 13;8(1):12064. doi: 10.1038/s41598-018-30500-y.

6.

Fetal articular cartilage regeneration versus adult fibrocartilaginous repair: secretome proteomics unravels molecular mechanisms in an ovine model.

Ribitsch I, Mayer RL, Egerbacher M, Gabner S, Kańduła MM, Rosser J, Haltmayer E, Auer U, Gültekin S, Huber J, Bileck A, Kreil DP, Gerner C, Jenner F.

Dis Model Mech. 2018 Jul 6;11(7). pii: dmm033092. doi: 10.1242/dmm.033092.

7.

Peripersonal space boundaries around the lower limbs.

Stone KD, Kandula M, Keizer A, Dijkerman HC.

Exp Brain Res. 2018 Jan;236(1):161-173. doi: 10.1007/s00221-017-5115-0. Epub 2017 Nov 2.

PMID:
29098315
8.

Root traits of European Vicia faba cultivars-Using machine learning to explore adaptations to agroclimatic conditions.

Zhao J, Sykacek P, Bodner G, Rewald B.

Plant Cell Environ. 2018 Sep;41(9):1984-1996. doi: 10.1111/pce.13062. Epub 2017 Oct 16.

PMID:
28857245
9.

On the contribution of overt tactile expectations to visuo-tactile interactions within the peripersonal space.

Kandula M, Van der Stoep N, Hofman D, Dijkerman HC.

Exp Brain Res. 2017 Aug;235(8):2511-2522. doi: 10.1007/s00221-017-4965-9. Epub 2017 May 20.

10.

Transcriptomic changes in CHO cells after adaptation to suspension growth in protein-free medium analysed by a species-specific microarray.

Shridhar S, Klanert G, Auer N, Hernandez-Lopez I, Kańduła MM, Hackl M, Grillari J, Stralis-Pavese N, Kreil DP, Borth N.

J Biotechnol. 2017 Sep 10;257:13-21. doi: 10.1016/j.jbiotec.2017.03.012. Epub 2017 Mar 14.

11.

Thyroid Progenitors Are Robustly Derived from Embryonic Stem Cells through Transient, Developmental Stage-Specific Overexpression of Nkx2-1.

Dame K, Cincotta S, Lang AH, Sanghrajka RM, Zhang L, Choi J, Kwok L, Wilson T, Kańduła MM, Monti S, Hollenberg AN, Mehta P, Kotton DN, Ikonomou L.

Stem Cell Reports. 2017 Feb 14;8(2):216-225. doi: 10.1016/j.stemcr.2016.12.024. Epub 2017 Feb 2.

12.
13.

Cryptococcemia in an HIV-negative patient with decompensated liver cirrhosis.

Kandula M, Kelkar AH, Liberio N, Aiyer MK.

J Community Hosp Intern Med Perspect. 2016 Dec 15;6(6):33383. doi: 10.3402/jchimp.v6.33383. eCollection 2016.

14.

Discovery and preclinical development of a novel prodrug conjugate of mesalamine with eicosapentaenoic acid and caprylic acid for the treatment of inflammatory bowel diseases.

Kandula M, Sunil Kumar KB, Palanichamy S, Rampal A.

Int Immunopharmacol. 2016 Nov;40:443-451. doi: 10.1016/j.intimp.2016.09.013. Epub 2016 Oct 4.

PMID:
27716592
15.

Location estimation of approaching objects is modulated by the observer's inherent and momentary action capabilities.

Kandula M, Hofman D, Dijkerman HC.

Exp Brain Res. 2016 Aug;234(8):2315-22. doi: 10.1007/s00221-016-4637-1. Epub 2016 Apr 27.

16.

MALDI TOF/TOF-Based Approach for the Identification of d- Amino Acids in Biologically Active Peptides and Proteins.

Koehbach J, Gruber CW, Becker C, Kreil DP, Jilek A.

J Proteome Res. 2016 May 6;15(5):1487-96. doi: 10.1021/acs.jproteome.5b01067. Epub 2016 Mar 25.

17.

Association of clinical signs and symptoms of Ebola viral disease with case fatality: a systematic review and meta-analysis.

Moole H, Chitta S, Victor D, Kandula M, Moole V, Ghadiam H, Akepati A, Yerasi C, Uppu A, Dharmapuri S, Boddireddy R, Fischer J, Lynch T.

J Community Hosp Intern Med Perspect. 2015 Sep 1;5(4):28406. doi: 10.3402/jchimp.v5.28406. eCollection 2015.

18.

Microarray profiling of preselected CHO host cell subclones identifies gene expression patterns associated with increased production capacity.

Harreither E, Hackl M, Pichler J, Shridhar S, Auer N, Łabaj PP, Scheideler M, Karbiener M, Grillari J, Kreil DP, Borth N.

Biotechnol J. 2015 Oct;10(10):1625-38. doi: 10.1002/biot.201400857. Epub 2015 Sep 23.

PMID:
26315449
19.

Experiences with workflows for automating data-intensive bioinformatics.

Spjuth O, Bongcam-Rudloff E, Hernández GC, Forer L, Giovacchini M, Guimera RV, Kallio A, Korpelainen E, Kańduła MM, Krachunov M, Kreil DP, Kulev O, Łabaj PP, Lampa S, Pireddu L, Schönherr S, Siretskiy A, Vassilev D.

Biol Direct. 2015 Aug 19;10:43. doi: 10.1186/s13062-015-0071-8.

20.

Polarization-Sensitive Optical Coherence Tomography and Conventional Retinal Imaging Strategies in Assessing Foveal Integrity in Geographic Atrophy.

Sayegh RG, Zotter S, Roberts PK, Kandula MM, Sacu S, Kreil DP, Baumann B, Pircher M, Hitzenberger CK, Schmidt-Erfurth U.

Invest Ophthalmol Vis Sci. 2015 Aug;56(9):5246-55. doi: 10.1167/iovs.14-15114.

PMID:
26244300

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