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Items: 1 to 20 of 113

1.

Transcriptome-Wide Mapping of m6 A and m6 Am at Single-Nucleotide Resolution Using miCLIP.

Hawley BR, Jaffrey SR.

Curr Protoc Mol Biol. 2019 Mar 15:e88. doi: 10.1002/cpmb.88. [Epub ahead of print]

PMID:
30874375
2.

Spectral Tuning by a Single Nucleotide Controls the Fluorescence Properties of a Fluorogenic Aptamer.

Filonov GS, Song W, Jaffrey SR.

Biochemistry. 2019 Mar 11. doi: 10.1021/acs.biochem.9b00048. [Epub ahead of print]

PMID:
30838859
3.

FTO controls reversible m6Am RNA methylation during snRNA biogenesis.

Mauer J, Sindelar M, Despic V, Guez T, Hawley BR, Vasseur JJ, Rentmeister A, Gross SS, Pellizzoni L, Debart F, Goodarzi H, Jaffrey SR.

Nat Chem Biol. 2019 Feb 18. doi: 10.1038/s41589-019-0231-8. [Epub ahead of print]

PMID:
30778204
4.

Detection of Low-Abundance Metabolites in Live Cells Using an RNA Integrator.

You M, Litke JL, Wu R, Jaffrey SR.

Cell Chem Biol. 2019 Jan 25. pii: S2451-9456(19)30027-3. doi: 10.1016/j.chembiol.2019.01.005. [Epub ahead of print]

PMID:
30773480
5.

Combining chemical synthesis and enzymatic methylation to access short RNAs with various 5' caps.

Muthmann N, Guez T, Vasseur JJ, Jaffrey SR, Debart F, Rentmeister A.

Chembiochem. 2019 Feb 15. doi: 10.1002/cbic.201900037. [Epub ahead of print]

PMID:
30768827
6.

Nonsense-mediated RNA decay in the brain: emerging modulator of neural development and disease.

Jaffrey SR, Wilkinson MF.

Nat Rev Neurosci. 2018 Dec;19(12):715-728. doi: 10.1038/s41583-018-0079-z. Review.

PMID:
30410025
7.

FTO, m6 Am , and the hypothesis of reversible epitranscriptomic mRNA modifications.

Mauer J, Jaffrey SR.

FEBS Lett. 2018 Jun;592(12):2012-2022. doi: 10.1002/1873-3468.13092. Epub 2018 May 24. Review.

PMID:
29754392
8.

Distinguishing RNA modifications from noise in epitranscriptome maps.

Grozhik AV, Jaffrey SR.

Nat Chem Biol. 2018 Feb 14;14(3):215-225. doi: 10.1038/nchembio.2546.

PMID:
29443978
9.

A Staufen1-mediated decay pathway influences the local transcriptome in axons.

Kim JY, Deglincerti A, Jaffrey SR.

Translation (Austin). 2017 Dec 12;5(2):e1414016. doi: 10.1080/21690731.2017.1414016. eCollection 2017.

10.

RNA-Based Fluorescent Biosensors for Detecting Metabolites in vitro and in Living Cells.

Jaffrey SR.

Adv Pharmacol. 2018;82:187-203. doi: 10.1016/bs.apha.2017.09.005. Epub 2017 Oct 25.

PMID:
29413520
11.

Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1.

Wu B, Su S, Patil DP, Liu H, Gan J, Jaffrey SR, Ma J.

Nat Commun. 2018 Jan 29;9(1):420. doi: 10.1038/s41467-017-02770-z.

12.

Reading m6A in the Transcriptome: m6A-Binding Proteins.

Patil DP, Pickering BF, Jaffrey SR.

Trends Cell Biol. 2018 Feb;28(2):113-127. doi: 10.1016/j.tcb.2017.10.001. Epub 2017 Nov 2. Review.

13.

Epitranscriptomics: Shrinking maps of RNA modifications.

Grozhik AV, Jaffrey SR.

Nature. 2017 Nov 9;551(7679):174-176. doi: 10.1038/nature24156. Epub 2017 Oct 25. No abstract available.

PMID:
29072301
14.

Defining the location of promoter-associated R-loops at near-nucleotide resolution using bisDRIP-seq.

Dumelie JG, Jaffrey SR.

Elife. 2017 Oct 26;6. pii: e28306. doi: 10.7554/eLife.28306.

15.

A homodimer interface without base pairs in an RNA mimic of red fluorescent protein.

Warner KD, Sjekloća L, Song W, Filonov GS, Jaffrey SR, Ferré-D'Amaré AR.

Nat Chem Biol. 2017 Nov;13(11):1195-1201. doi: 10.1038/nchembio.2475. Epub 2017 Sep 25.

16.

Imaging RNA polymerase III transcription using a photostable RNA-fluorophore complex.

Song W, Filonov GS, Kim H, Hirsch M, Li X, Moon JD, Jaffrey SR.

Nat Chem Biol. 2017 Nov;13(11):1187-1194. doi: 10.1038/nchembio.2477. Epub 2017 Sep 25.

17.

The N6-methyladenosine (m6A)-forming enzyme METTL3 controls myeloid differentiation of normal hematopoietic and leukemia cells.

Vu LP, Pickering BF, Cheng Y, Zaccara S, Nguyen D, Minuesa G, Chou T, Chow A, Saletore Y, MacKay M, Schulman J, Famulare C, Patel M, Klimek VM, Garrett-Bakelman FE, Melnick A, Carroll M, Mason CE, Jaffrey SR, Kharas MG.

Nat Med. 2017 Nov;23(11):1369-1376. doi: 10.1038/nm.4416. Epub 2017 Sep 18.

18.

Rethinking m6A Readers, Writers, and Erasers.

Meyer KD, Jaffrey SR.

Annu Rev Cell Dev Biol. 2017 Oct 6;33:319-342. doi: 10.1146/annurev-cellbio-100616-060758. Epub 2017 Jul 31. Review.

19.

The m6A pathway facilitates sex determination in Drosophila.

Kan L, Grozhik AV, Vedanayagam J, Patil DP, Pang N, Lim KS, Huang YC, Joseph B, Lin CJ, Despic V, Guo J, Yan D, Kondo S, Deng WM, Dedon PC, Jaffrey SR, Lai EC.

Nat Commun. 2017 Jul 4;8:15737. doi: 10.1038/ncomms15737.

20.

Mapping m6A at Individual-Nucleotide Resolution Using Crosslinking and Immunoprecipitation (miCLIP).

Grozhik AV, Linder B, Olarerin-George AO, Jaffrey SR.

Methods Mol Biol. 2017;1562:55-78. doi: 10.1007/978-1-4939-6807-7_5.

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