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Items: 14

1.

Common variants in MMP20 at 11q22.2 predispose to 11q deletion and neuroblastoma risk.

Chang X, Zhao Y, Hou C, Glessner J, McDaniel L, Diamond MA, Thomas K, Li J, Wei Z, Liu Y, Guo Y, Mentch FD, Qiu H, Kim C, Evans P, Vaksman Z, Diskin SJ, Attiyeh EF, Sleiman P, Maris JM, Hakonarson H.

Nat Commun. 2017 Sep 18;8(1):569. doi: 10.1038/s41467-017-00408-8.

2.

A hyperactive transcriptional state marks genome reactivation at the mitosis-G1 transition.

Hsiung CC, Bartman CR, Huang P, Ginart P, Stonestrom AJ, Keller CA, Face C, Jahn KS, Evans P, Sankaranarayanan L, Giardine B, Hardison RC, Raj A, Blobel GA.

Genes Dev. 2016 Jun 15;30(12):1423-39. doi: 10.1101/gad.280859.116.

3.

Exome sequencing identifies recurrent mutations in NF1 and RASopathy genes in sun-exposed melanomas.

Krauthammer M, Kong Y, Bacchiocchi A, Evans P, Pornputtapong N, Wu C, McCusker JP, Ma S, Cheng E, Straub R, Serin M, Bosenberg M, Ariyan S, Narayan D, Sznol M, Kluger HM, Mane S, Schlessinger J, Lifton RP, Halaban R.

Nat Genet. 2015 Sep;47(9):996-1002. doi: 10.1038/ng.3361. Epub 2015 Jul 27.

4.

Site-Specific Proteomic Mapping Identifies Selectively Modified Regulatory Cysteine Residues in Functionally Distinct Protein Networks.

Gould NS, Evans P, Martínez-Acedo P, Marino SM, Gladyshev VN, Carroll KS, Ischiropoulos H.

Chem Biol. 2015 Jul 23;22(7):965-75. doi: 10.1016/j.chembiol.2015.06.010. Epub 2015 Jul 9.

5.

Regulation of brain glutamate metabolism by nitric oxide and S-nitrosylation.

Raju K, Doulias PT, Evans P, Krizman EN, Jackson JG, Horyn O, Daikhin Y, Nissim I, Yudkoff M, Nissim I, Sharp KA, Robinson MB, Ischiropoulos H.

Sci Signal. 2015 Jul 7;8(384):ra68. doi: 10.1126/scisignal.aaa4312.

6.

Functions of BET proteins in erythroid gene expression.

Stonestrom AJ, Hsu SC, Jahn KS, Huang P, Keller CA, Giardine BM, Kadauke S, Campbell AE, Evans P, Hardison RC, Blobel GA.

Blood. 2015 Apr 30;125(18):2825-34. doi: 10.1182/blood-2014-10-607309. Epub 2015 Feb 18.

7.

Identification of PLX4032-resistance mechanisms and implications for novel RAF inhibitors.

Choi J, Landrette SF, Wang T, Evans P, Bacchiocchi A, Bjornson R, Cheng E, Stiegler AL, Gathiaka S, Acevedo O, Boggon TJ, Krauthammer M, Halaban R, Xu T.

Pigment Cell Melanoma Res. 2014 Mar;27(2):253-62. doi: 10.1111/pcmr.12197. Epub 2014 Jan 6.

8.

Adjusting for background mutation frequency biases improves the identification of cancer driver genes.

Evans P, Avey S, Kong Y, Krauthammer M.

IEEE Trans Nanobioscience. 2013 Sep;12(3):150-7. doi: 10.1109/TNB.2013.2263391. Epub 2013 May 16.

9.

Correlated evolution of positions within mammalian cis elements.

Mukherjee R, Evans P, Singh LN, Hannenhalli S.

PLoS One. 2013;8(2):e55521. doi: 10.1371/journal.pone.0055521. Epub 2013 Feb 8.

10.

Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma.

Krauthammer M, Kong Y, Ha BH, Evans P, Bacchiocchi A, McCusker JP, Cheng E, Davis MJ, Goh G, Choi M, Ariyan S, Narayan D, Dutton-Regester K, Capatana A, Holman EC, Bosenberg M, Sznol M, Kluger HM, Brash DE, Stern DF, Materin MA, Lo RS, Mane S, Ma S, Kidd KK, Hayward NK, Lifton RP, Schlessinger J, Boggon TJ, Halaban R.

Nat Genet. 2012 Sep;44(9):1006-14. doi: 10.1038/ng.2359. Epub 2012 Jul 29.

11.

Exploring the use of social media to measure journal article impact.

Evans P, Krauthammer M.

AMIA Annu Symp Proc. 2011;2011:374-81. Epub 2011 Oct 22.

12.

Sequence alignment reveals possible MAPK docking motifs on HIV proteins.

Evans P, Sacan A, Ungar L, Tozeren A.

PLoS One. 2010 Jan 28;5(1):e8942. doi: 10.1371/journal.pone.0008942.

13.

Host sequence motifs shared by HIV predict response to antiretroviral therapy.

Dampier W, Evans P, Ungar L, Tozeren A.

BMC Med Genomics. 2009 Jul 23;2:47. doi: 10.1186/1755-8794-2-47.

14.

Prediction of HIV-1 virus-host protein interactions using virus and host sequence motifs.

Evans P, Dampier W, Ungar L, Tozeren A.

BMC Med Genomics. 2009 May 18;2:27. doi: 10.1186/1755-8794-2-27.

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