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Items: 12

1.

LifeStyle-Specific-Islands (LiSSI): Integrated Bioinformatics Platform for Genomic Island Analysis.

Barbosa E, Röttger R, Hauschild AC, de Castro Soares S, Böcker S, Azevedo V, Baumbach J.

J Integr Bioinform. 2017 Jul 5;14(2). pii: /j/jib.2017.14.issue-2/jib-2017-0010/jib-2017-0010.xml. doi: 10.1515/jib-2017-0010.

2.

Whole-Genome Sequence of Corynebacterium auriscanis Strain CIP 106629 Isolated from a Dog with Bilateral Otitis from the United Kingdom.

Tiwari S, Jamal SB, Oliveira LC, Clermont D, Bizet C, Mariano D, de Carvalho PV, Souza F, Pereira FL, de Castro Soares S, Guimarães LC, Dorella F, Carvalho A, Leal C, Barh D, Figueiredo H, Hassan SS, Azevedo V, Silva A.

Genome Announc. 2016 Aug 11;4(4). pii: e00683-16. doi: 10.1128/genomeA.00683-16.

3.

Complete genome sequence of Streptococcus agalactiae strain GBS85147 serotype of type Ia isolated from human oropharynx.

de Aguiar EL, Mariano DC, Viana MV, Benevides Lde J, de Souza Rocha F, de Castro Oliveira L, Pereira FL, Dorella FA, Leal CA, de Carvalho AF, Santos GS, Mattos-Guaraldi AL, Nagao PE, de Castro Soares S, Hassan SS, Pinto AC, Figueiredo HC, Azevedo V.

Stand Genomic Sci. 2016 Jun 3;11:39. doi: 10.1186/s40793-016-0158-6. eCollection 2016.

4.

Complete genome sequences of Francisella noatunensis subsp. orientalis strains FNO12, FNO24 and FNO190: a fish pathogen with genomic clonal behavior.

Gonçalves LA, de Castro Soares S, Pereira FL, Dorella FA, de Carvalho AF, de Freitas Almeida GM, Leal CA, Azevedo V, Figueiredo HC.

Stand Genomic Sci. 2016 Apr 12;11:30. doi: 10.1186/s40793-016-0151-0. eCollection 2016.

5.

Proteome scale comparative modeling for conserved drug and vaccine targets identification in Corynebacterium pseudotuberculosis.

Hassan SS, Tiwari S, Guimarães LC, Jamal SB, Folador E, Sharma NB, de Castro Soares S, Almeida S, Ali A, Islam A, Póvoa FD, de Abreu VA, Jain N, Bhattacharya A, Juneja L, Miyoshi A, Silva A, Barh D, Turjanski A, Azevedo V, Ferreira RS.

BMC Genomics. 2014;15 Suppl 7:S3. doi: 10.1186/1471-2164-15-S7-S3. Epub 2014 Oct 27.

6.

Genome Sequence of Corynebacterium ulcerans Strain 210932.

Viana MV, de Jesus Benevides L, Batista Mariano DC, de Souza Rocha F, Bagano Vilas Boas PC, Folador EL, Pereira FL, Alves Dorella F, Gomes Leal CA, Fiorini de Carvalho A, Silva A, de Castro Soares S, Pereira Figueiredo HC, Azevedo V, Guimarães LC.

Genome Announc. 2014 Nov 26;2(6). pii: e01233-14. doi: 10.1128/genomeA.01233-14.

7.

High efficiency application of a mate-paired library from next-generation sequencing to postlight sequencing: Corynebacterium pseudotuberculosis as a case study for microbial de novo genome assembly.

Ramos RT, Carneiro AR, de Castro Soares S, Barbosa S, Varuzza L, Orabona G, Tauch A, Azevedo V, Schneider MP, Silva A.

J Microbiol Methods. 2013 Dec;95(3):441-7. doi: 10.1016/j.mimet.2013.06.006. Epub 2013 Jun 21.

PMID:
23792707
8.

Genome sequence of Exiguobacterium antarcticum B7, isolated from a biofilm in Ginger Lake, King George Island, Antarctica.

Carneiro AR, Ramos RT, Dall'Agnol H, Pinto AC, de Castro Soares S, Santos AR, Guimarães LC, Almeida SS, Baraúna RA, das Graças DA, Franco LC, Ali A, Hassan SS, Nunes CI, Barbosa MS, Fiaux KK, Aburjaile FF, Barbosa EG, Bakhtiar SM, Vilela D, Nóbrega F, dos Santos AL, Carepo MS, Azevedo V, Schneider MP, Pellizari VH, Silva A.

J Bacteriol. 2012 Dec;194(23):6689-90. doi: 10.1128/JB.01791-12.

9.

Complete genome sequence of Corynebacterium pseudotuberculosis Cp31, isolated from an Egyptian buffalo.

Silva A, Ramos RT, Ribeiro Carneiro A, Cybelle Pinto A, de Castro Soares S, Rodrigues Santos A, Silva Almeida S, Guimarães LC, Figueira Aburjaile F, Vieira Barbosa EG, Alves Dorella F, Souza Rocha F, Souza Lopes T, Kawasaki R, Gomes Sá P, da Rocha Coimbra NA, Teixeira Cerdeira L, Silvanira Barbosa M, Cruz Schneider MP, Miyoshi A, Selim SA, Moawad MS, Azevedo V.

J Bacteriol. 2012 Dec;194(23):6663-4. doi: 10.1128/JB.01782-12.

10.

Whole-genome sequence of Corynebacterium pseudotuberculosis PAT10 strain isolated from sheep in Patagonia, Argentina.

Cerdeira LT, Pinto AC, Schneider MP, de Almeida SS, dos Santos AR, Barbosa EG, Ali A, Barbosa MS, Carneiro AR, Ramos RT, de Oliveira RS, Barh D, Barve N, Zambare V, Belchior SE, Guimarães LC, de Castro Soares S, Dorella FA, Rocha FS, de Abreu VA, Tauch A, Trost E, Miyoshi A, Azevedo V, Silva A.

J Bacteriol. 2011 Nov;193(22):6420-1. doi: 10.1128/JB.06044-11.

11.

The phage display technique: advantages and recent patents.

de Almeida SS, Magalhães AA, de Castro Soares S, Zurita-Turk M, Goulart LR, Miyoshi A, Azevedo V.

Recent Pat DNA Gene Seq. 2011 Aug;5(2):136-48.

PMID:
21663585
12.

A novel comparative genomics analysis for common drug and vaccine targets in Corynebacterium pseudotuberculosis and other CMN group of human pathogens.

Barh D, Jain N, Tiwari S, Parida BP, D'Afonseca V, Li L, Ali A, Santos AR, Guimarães LC, de Castro Soares S, Miyoshi A, Bhattacharjee A, Misra AN, Silva A, Kumar A, Azevedo V.

Chem Biol Drug Des. 2011 Jul;78(1):73-84. doi: 10.1111/j.1747-0285.2011.01118.x. Epub 2011 May 25.

PMID:
21443692

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