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Items: 1 to 20 of 23


PIBAS FedSPARQL: a web-based platform for integration and exploration of bioinformatics datasets.

Djokic-Petrovic M, Cvjetkovic V, Yang J, Zivanovic M, Wild DJ.

J Biomed Semantics. 2017 Sep 20;8(1):42. doi: 10.1186/s13326-017-0151-z.


An activity canyon characterization of the pharmacological topography.

Kulkarni VS, Wild DJ.

J Cheminform. 2016 Aug 19;8:41. doi: 10.1186/s13321-016-0153-3. eCollection 2016.


Equivalence of electronic and paper administration of patient-reported outcome measures: a systematic review and meta-analysis of studies conducted between 2007 and 2013.

Muehlhausen W, Doll H, Quadri N, Fordham B, O'Donohoe P, Dogar N, Wild DJ.

Health Qual Life Outcomes. 2015 Oct 7;13:167. doi: 10.1186/s12955-015-0362-x. Review.


Optimizing drug-target interaction prediction based on random walk on heterogeneous networks.

Seal A, Ahn YY, Wild DJ.

J Cheminform. 2015 Aug 19;7:40. doi: 10.1186/s13321-015-0089-z. eCollection 2015.


Novel Phenotypic Outcomes Identified for a Public Collection of Approved Drugs from a Publicly Accessible Panel of Assays.

Lee JA, Shinn P, Jaken S, Oliver S, Willard FS, Heidler S, Peery RB, Oler J, Chu S, Southall N, Dexheimer TS, Smallwood J, Huang R, Guha R, Jadhav A, Cox K, Austin CP, Simeonov A, Sittampalam GS, Husain S, Franklin N, Wild DJ, Yang JJ, Sutherland JJ, Thomas CJ.

PLoS One. 2015 Jul 15;10(7):e0130796. doi: 10.1371/journal.pone.0130796. eCollection 2015.


Cheminformatics for the masses: a chance to increase educational opportunities for the next generation of cheminformaticians.

Wild DJ.

J Cheminform. 2013 Jul 5;5(1):32. doi: 10.1186/1758-2946-5-32. No abstract available.


The ChEMBL database as linked open data.

Willighagen EL, Waagmeester A, Spjuth O, Ansell P, Williams AJ, Tkachenko V, Hastings J, Chen B, Wild DJ.

J Cheminform. 2013 May 8;5(1):23. doi: 10.1186/1758-2946-5-23.


Enhanced ranking of PknB Inhibitors using data fusion methods.

Seal A, Yogeeswari P, Sriram D; OSDD Consortium, Wild DJ.

J Cheminform. 2013 Jan 14;5(1):2. doi: 10.1186/1758-2946-5-2.


Discovering associations in biomedical datasets by link-based associative classifier (LAC).

Yu P, Wild DJ.

PLoS One. 2012;7(12):e51018. doi: 10.1371/journal.pone.0051018. Epub 2012 Dec 5.


Fast rule-based bioactivity prediction using associative classification mining.

Yu P, Wild DJ.

J Cheminform. 2012 Nov 23;4(1):29. doi: 10.1186/1758-2946-4-29.


Assessing drug target association using semantic linked data.

Chen B, Ding Y, Wild DJ.

PLoS Comput Biol. 2012;8(7):e1002574. doi: 10.1371/journal.pcbi.1002574. Epub 2012 Jul 5.


In-silico predictive mutagenicity model generation using supervised learning approaches.

Seal A, Passi A, Jaleel UA; Open Source Drug Discovery Consortium, Wild DJ.

J Cheminform. 2012 May 15;4(1):10. doi: 10.1186/1758-2946-4-10.


Improving integrative searching of systems chemical biology data using semantic annotation.

Chen B, Ding Y, Wild DJ.

J Cheminform. 2012 Mar 8;4(1):6. doi: 10.1186/1758-2946-4-6.


Mining relational paths in integrated biomedical data.

He B, Tang J, Ding Y, Wang H, Sun Y, Shin JH, Chen B, Moorthy G, Qiu J, Desai P, Wild DJ.

PLoS One. 2011;6(12):e27506. doi: 10.1371/journal.pone.0027506. Epub 2011 Dec 6.


Semantic inference using chemogenomics data for drug discovery.

Zhu Q, Sun Y, Challa S, Ding Y, Lajiness MS, Wild DJ.

BMC Bioinformatics. 2011 Jun 23;12:256. doi: 10.1186/1471-2105-12-256.


Finding complex biological relationships in recent PubMed articles using Bio-LDA.

Wang H, Ding Y, Tang J, Dong X, He B, Qiu J, Wild DJ.

PLoS One. 2011 Mar 23;6(3):e17243. doi: 10.1371/journal.pone.0017243.


Chem2Bio2RDF: a semantic framework for linking and data mining chemogenomic and systems chemical biology data.

Chen B, Dong X, Jiao D, Wang H, Zhu Q, Ding Y, Wild DJ.

BMC Bioinformatics. 2010 May 17;11:255. doi: 10.1186/1471-2105-11-255.


Grand challenges for cheminformatics.

Wild DJ.

J Cheminform. 2009 Mar 17;1:1. doi: 10.1186/1758-2946-1-1. No abstract available.


PubChemSR: a search and retrieval tool for PubChem.

Hur J, Wild DJ.

Chem Cent J. 2008 May 15;2:11. doi: 10.1186/1752-153X-2-11.

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