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Items: 1 to 20 of 83

1.

Compendium of TCDD-mediated transcriptomic response datasets in mammalian model systems.

Prokopec SD, Houlahan KE, Sun RX, Watson JD, Yao CQ, Lee J, P'ng C, Pang R, Wu AH, Chong LC, Smith AB, Harding NJ, Moffat ID, Lindén J, Lensu S, Okey AB, Pohjanvirta R, Boutros PC.

BMC Genomics. 2017 Jan 13;18(1):78. doi: 10.1186/s12864-016-3446-z.

2.

2,3,7,8 Tetrachlorodibenzo-p-dioxin-induced RNA abundance changes identify Ackr3, Col18a1, Cyb5a and Glud1 as candidate mediators of toxicity.

Watson JD, Prokopec SD, Smith AB, Okey AB, Pohjanvirta R, Boutros PC.

Arch Toxicol. 2017 Jan;91(1):325-338. doi: 10.1007/s00204-016-1720-0. Epub 2016 Apr 30.

3.

Human Genome Project: Twenty-five years of big biology.

Green ED, Watson JD, Collins FS.

Nature. 2015 Oct 1;526(7571):29-31. doi: 10.1038/526029a. No abstract available.

4.

Male and female mice show significant differences in hepatic transcriptomic response to 2,3,7,8-tetrachlorodibenzo-p-dioxin.

Lee J, Prokopec SD, Watson JD, Sun RX, Pohjanvirta R, Boutros PC.

BMC Genomics. 2015 Aug 20;16:625. doi: 10.1186/s12864-015-1840-6.

5.

Cross-species transcriptomic analysis elucidates constitutive aryl hydrocarbon receptor activity.

Sun RX, Chong LC, Simmons TT, Houlahan KE, Prokopec SD, Watson JD, Moffat ID, Lensu S, Lindén J, P'ng C, Okey AB, Pohjanvirta R, Boutros PC.

BMC Genomics. 2014 Dec 3;15:1053. doi: 10.1186/1471-2164-15-1053.

6.

Identification of reference proteins for Western blot analyses in mouse model systems of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) toxicity.

Prokopec SD, Watson JD, Pohjanvirta R, Boutros PC.

PLoS One. 2014 Oct 17;9(10):e110730. doi: 10.1371/journal.pone.0110730. eCollection 2014.

7.

A functional anatomic defect of the cystic fibrosis airway.

Birket SE, Chu KK, Liu L, Houser GH, Diephuis BJ, Wilsterman EJ, Dierksen G, Mazur M, Shastry S, Li Y, Watson JD, Smith AT, Schuster BS, Hanes J, Grizzle WE, Sorscher EJ, Tearney GJ, Rowe SM.

Am J Respir Crit Care Med. 2014 Aug 15;190(4):421-32. doi: 10.1164/rccm.201404-0670OC.

8.

ShatterProof: operational detection and quantification of chromothripsis.

Govind SK, Zia A, Hennings-Yeomans PH, Watson JD, Fraser M, Anghel C, Wyatt AW, van der Kwast T, Collins CC, McPherson JD, Bristow RG, Boutros PC.

BMC Bioinformatics. 2014 Mar 19;15:78. doi: 10.1186/1471-2105-15-78.

9.

708 Common and 2010 rare DISC1 locus variants identified in 1542 subjects: analysis for association with psychiatric disorder and cognitive traits.

Thomson PA, Parla JS, McRae AF, Kramer M, Ramakrishnan K, Yao J, Soares DC, McCarthy S, Morris SW, Cardone L, Cass S, Ghiban E, Hennah W, Evans KL, Rebolini D, Millar JK, Harris SE, Starr JM, MacIntyre DJ; Generation Scotland, McIntosh AM, Watson JD, Deary IJ, Visscher PM, Blackwood DH, McCombie WR, Porteous DJ.

Mol Psychiatry. 2014 Jun;19(6):668-75. doi: 10.1038/mp.2013.68. Epub 2013 Jun 4.

10.

Systematic evaluation of medium-throughput mRNA abundance platforms.

Prokopec SD, Watson JD, Waggott DM, Smith AB, Wu AH, Okey AB, Pohjanvirta R, Boutros PC.

RNA. 2013 Jan;19(1):51-62. doi: 10.1261/rna.034710.112. Epub 2012 Nov 20.

11.

Formation and specification of a Drosophila dopaminergic precursor cell.

Watson JD, Crews ST.

Development. 2012 Sep;139(18):3316-25. doi: 10.1242/dev.079525. Epub 2012 Aug 8.

12.

Drosophila melanogaster Zelda and Single-minded collaborate to regulate an evolutionarily dynamic CNS midline cell enhancer.

Pearson JC, Watson JD, Crews ST.

Dev Biol. 2012 Jun 15;366(2):420-32. doi: 10.1016/j.ydbio.2012.04.001. Epub 2012 Apr 17.

13.

Optogenetic analysis of a nociceptor neuron and network reveals ion channels acting downstream of primary sensors.

Husson SJ, Costa WS, Wabnig S, Stirman JN, Watson JD, Spencer WC, Akerboom J, Looger LL, Treinin M, Miller DM 3rd, Lu H, Gottschalk A.

Curr Biol. 2012 May 8;22(9):743-52. doi: 10.1016/j.cub.2012.02.066. Epub 2012 Apr 5.

14.

Netrin (UNC-6) mediates dendritic self-avoidance.

Smith CJ, Watson JD, VanHoven MK, Colón-Ramos DA, Miller DM 3rd.

Nat Neurosci. 2012 Mar 18;15(5):731-7. doi: 10.1038/nn.3065.

15.

Tackling antibiotic resistance.

Bush K, Courvalin P, Dantas G, Davies J, Eisenstein B, Huovinen P, Jacoby GA, Kishony R, Kreiswirth BN, Kutter E, Lerner SA, Levy S, Lewis K, Lomovskaya O, Miller JH, Mobashery S, Piddock LJ, Projan S, Thomas CM, Tomasz A, Tulkens PM, Walsh TR, Watson JD, Witkowski J, Witte W, Wright G, Yeh P, Zgurskaya HI.

Nat Rev Microbiol. 2011 Nov 2;9(12):894-6. doi: 10.1038/nrmicro2693. Review.

16.

A transcriptional program promotes remodeling of GABAergic synapses in Caenorhabditis elegans.

Petersen SC, Watson JD, Richmond JE, Sarov M, Walthall WW, Miller DM 3rd.

J Neurosci. 2011 Oct 26;31(43):15362-75. doi: 10.1523/JNEUROSCI.3181-11.2011.

17.

Conserved features of cancer cells define their sensitivity to HAMLET-induced death; c-Myc and glycolysis.

Storm P, Aits S, Puthia MK, Urbano A, Northen T, Powers S, Bowen B, Chao Y, Reindl W, Lee DY, Sullivan NL, Zhang J, Trulsson M, Yang H, Watson JD, Svanborg C.

Oncogene. 2011 Dec 1;30(48):4765-79. doi: 10.1038/onc.2011.196. Epub 2011 Jun 6.

18.

Drosophila hedgehog signaling and engrailed-runt mutual repression direct midline glia to alternative ensheathing and non-ensheathing fates.

Watson JD, Wheeler SR, Stagg SB, Crews ST.

Development. 2011 Apr;138(7):1285-95. doi: 10.1242/dev.056895. Epub 2011 Feb 24.

19.

A spatial and temporal map of C. elegans gene expression.

Spencer WC, Zeller G, Watson JD, Henz SR, Watkins KL, McWhirter RD, Petersen S, Sreedharan VT, Widmer C, Jo J, Reinke V, Petrella L, Strome S, Von Stetina SE, Katz M, Shaham S, Rätsch G, Miller DM 3rd.

Genome Res. 2011 Feb;21(2):325-41. doi: 10.1101/gr.114595.110. Epub 2010 Dec 22.

20.

Coenzyme Q protects Caenorhabditis elegans GABA neurons from calcium-dependent degeneration.

Earls LR, Hacker ML, Watson JD, Miller DM 3rd.

Proc Natl Acad Sci U S A. 2010 Aug 10;107(32):14460-5. doi: 10.1073/pnas.0910630107. Epub 2010 Jul 27.

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