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Items: 1 to 20 of 97

1.

GO-Elite: a flexible solution for pathway and ontology over-representation.

Zambon AC, Gaj S, Ho I, Hanspers K, Vranizan K, Evelo CT, Conklin BR, Pico AR, Salomonis N.

Bioinformatics. 2012 Aug 15;28(16):2209-10. doi: 10.1093/bioinformatics/bts366. Epub 2012 Jun 27.

2.

p63 regulates olfactory stem cell self-renewal and differentiation.

Fletcher RB, Prasol MS, Estrada J, Baudhuin A, Vranizan K, Choi YG, Ngai J.

Neuron. 2011 Dec 8;72(5):748-59. doi: 10.1016/j.neuron.2011.09.009.

3.

Early postmyocardial infarction survival in Murphy Roths Large mice is mediated by attenuated apoptosis and inflammation but depends on genetic background.

Hunt DL, Campbell PH, Zambon AC, Vranizan K, Evans SM, Kuo HC, Yamaguchi KD, Omens JH, McCulloch AD.

Exp Physiol. 2012 Jan;97(1):102-14. doi: 10.1113/expphysiol.2011.060269. Epub 2011 Oct 3.

4.

An evolutionary conserved role for anaplastic lymphoma kinase in behavioral responses to ethanol.

Lasek AW, Lim J, Kliethermes CL, Berger KH, Joslyn G, Brush G, Xue L, Robertson M, Moore MS, Vranizan K, Morris SW, Schuckit MA, White RL, Heberlein U.

PLoS One. 2011;6(7):e22636. doi: 10.1371/journal.pone.0022636. Epub 2011 Jul 22.

5.

Transcription factors expressed in olfactory bulb local progenitor cells revealed by genome-wide transcriptome profiling.

Campbell GR, Baudhuin A, Vranizan K, Ngai J.

Mol Cell Neurosci. 2011 Feb;46(2):548-61. doi: 10.1016/j.mcn.2010.12.012. Epub 2010 Dec 29.

6.

Temporal gene expression profiling during rat femoral marrow ablation-induced intramembranous bone regeneration.

Wise JK, Sena K, Vranizan K, Pollock JF, Healy KE, Hughes WF, Sumner DR, Virdi AS.

PLoS One. 2010 Oct 1;5(10). pii: e12987. doi: 10.1371/journal.pone.0012987.

7.

Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation.

Salomonis N, Schlieve CR, Pereira L, Wahlquist C, Colas A, Zambon AC, Vranizan K, Spindler MJ, Pico AR, Cline MS, Clark TA, Williams A, Blume JE, Samal E, Mercola M, Merrill BJ, Conklin BR.

Proc Natl Acad Sci U S A. 2010 Jun 8;107(23):10514-9. doi: 10.1073/pnas.0912260107. Epub 2010 May 24.

8.

Ethanol-regulated genes that contribute to ethanol sensitivity and rapid tolerance in Drosophila.

Kong EC, Allouche L, Chapot PA, Vranizan K, Moore MS, Heberlein U, Wolf FW.

Alcohol Clin Exp Res. 2010 Feb;34(2):302-16. doi: 10.1111/j.1530-0277.2009.01093.x. Epub 2009 Nov 24.

9.

Alternative splicing in the differentiation of human embryonic stem cells into cardiac precursors.

Salomonis N, Nelson B, Vranizan K, Pico AR, Hanspers K, Kuchinsky A, Ta L, Mercola M, Conklin BR.

PLoS Comput Biol. 2009 Nov;5(11):e1000553. doi: 10.1371/journal.pcbi.1000553. Epub 2009 Nov 6.

10.

Developmental and evolutionary basis for drought tolerance of the Anopheles gambiae embryo.

Goltsev Y, Rezende GL, Vranizan K, Lanzaro G, Valle D, Levine M.

Dev Biol. 2009 Jun 15;330(2):462-70. doi: 10.1016/j.ydbio.2009.02.038. Epub 2009 Mar 17.

11.

The transcription/migration interface in heart precursors of Ciona intestinalis.

Christiaen L, Davidson B, Kawashima T, Powell W, Nolla H, Vranizan K, Levine M.

Science. 2008 Jun 6;320(5881):1349-52. doi: 10.1126/science.1158170.

12.

Early anti-oxidative and anti-proliferative curcumin effects on neuroglioma cells suggest therapeutic targets.

Panchal HD, Vranizan K, Lee CY, Ho J, Ngai J, Timiras PS.

Neurochem Res. 2008 Sep;33(9):1701-10. doi: 10.1007/s11064-008-9608-x. Epub 2008 Feb 26.

PMID:
18299980
13.

Gene expression signatures of cAMP/protein kinase A (PKA)-promoted, mitochondrial-dependent apoptosis. Comparative analysis of wild-type and cAMP-deathless S49 lymphoma cells.

Zhang L, Zambon AC, Vranizan K, Pothula K, Conklin BR, Insel PA.

J Biol Chem. 2008 Feb 15;283(7):4304-13. Epub 2007 Nov 29.

14.

Analysis of gene expression during neurite outgrowth and regeneration.

Szpara ML, Vranizan K, Tai YC, Goodman CS, Speed TP, Ngai J.

BMC Neurosci. 2007 Nov 23;8:100.

15.

Modeling insertional mutagenesis using gene length and expression in murine embryonic stem cells.

Nord AS, Vranizan K, Tingley W, Zambon AC, Hanspers K, Fong LG, Hu Y, Bacchetti P, Ferrin TE, Babbitt PC, Doniger SW, Skarnes WC, Young SG, Conklin BR.

PLoS One. 2007 Jul 18;2(7):e617.

16.

GenMAPP 2: new features and resources for pathway analysis.

Salomonis N, Hanspers K, Zambon AC, Vranizan K, Lawlor SC, Dahlquist KD, Doniger SW, Stuart J, Conklin BR, Pico AR.

BMC Bioinformatics. 2007 Jun 24;8:217.

17.

Gene-trapped mouse embryonic stem cell-derived cardiac myocytes and human genetics implicate AKAP10 in heart rhythm regulation.

Tingley WG, Pawlikowska L, Zaroff JG, Kim T, Nguyen T, Young SG, Vranizan K, Kwok PY, Whooley MA, Conklin BR.

Proc Natl Acad Sci U S A. 2007 May 15;104(20):8461-6. Epub 2007 May 7.

18.

Gene expression patterns define key transcriptional events in cell-cycle regulation by cAMP and protein kinase A.

Zambon AC, Zhang L, Minovitsky S, Kanter JR, Prabhakar S, Salomonis N, Vranizan K, Dubchak I, Conklin BR, Insel PA.

Proc Natl Acad Sci U S A. 2005 Jun 14;102(24):8561-6. Epub 2005 Jun 6.

19.

Identifying genetic networks underlying myometrial transition to labor.

Salomonis N, Cotte N, Zambon AC, Pollard KS, Vranizan K, Doniger SW, Dolganov G, Conklin BR.

Genome Biol. 2005;6(2):R12. Epub 2005 Jan 28.

20.

Time- and exercise-dependent gene regulation in human skeletal muscle.

Zambon AC, McDearmon EL, Salomonis N, Vranizan KM, Johansen KL, Adey D, Takahashi JS, Schambelan M, Conklin BR.

Genome Biol. 2003;4(10):R61. Epub 2003 Sep 25.

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