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Items: 13

1.

Same-Day Diagnostic and Surveillance Data for Tuberculosis via Whole-Genome Sequencing of Direct Respiratory Samples.

Votintseva AA, Bradley P, Pankhurst L, Del Ojo Elias C, Loose M, Nilgiriwala K, Chatterjee A, Smith EG, Sanderson N, Walker TM, Morgan MR, Wyllie DH, Walker AS, Peto TEA, Crook DW, Iqbal Z.

J Clin Microbiol. 2017 May;55(5):1285-1298. doi: 10.1128/JCM.02483-16. Epub 2017 Mar 8.

2.

Multi-site and nasal swabbing for carriage of Staphylococcus aureus: what does a single nose swab predict?

Young BC, Votintseva AA, Foster D, Godwin H, Miller RR, Anson LW, Walker AS, Peto TE, Crook DW, Knox K.

J Hosp Infect. 2017 Jan 30. pii: S0195-6701(17)30059-2. doi: 10.1016/j.jhin.2017.01.015. [Epub ahead of print]

3.

Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis.

Bradley P, Gordon NC, Walker TM, Dunn L, Heys S, Huang B, Earle S, Pankhurst LJ, Anson L, de Cesare M, Piazza P, Votintseva AA, Golubchik T, Wilson DJ, Wyllie DH, Diel R, Niemann S, Feuerriegel S, Kohl TA, Ismail N, Omar SV, Smith EG, Buck D, McVean G, Walker AS, Peto TE, Crook DW, Iqbal Z.

Nat Commun. 2016 Apr 20;7:11465. doi: 10.1038/ncomms11465. No abstract available.

4.

Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis.

Bradley P, Gordon NC, Walker TM, Dunn L, Heys S, Huang B, Earle S, Pankhurst LJ, Anson L, de Cesare M, Piazza P, Votintseva AA, Golubchik T, Wilson DJ, Wyllie DH, Diel R, Niemann S, Feuerriegel S, Kohl TA, Ismail N, Omar SV, Smith EG, Buck D, McVean G, Walker AS, Peto TE, Crook DW, Iqbal Z.

Nat Commun. 2015 Dec 21;6:10063. doi: 10.1038/ncomms10063. Erratum in: Nat Commun. 2016;7:11465.

5.

Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study.

Pankhurst LJ, Del Ojo Elias C, Votintseva AA, Walker TM, Cole K, Davies J, Fermont JM, Gascoyne-Binzi DM, Kohl TA, Kong C, Lemaitre N, Niemann S, Paul J, Rogers TR, Roycroft E, Smith EG, Supply P, Tang P, Wilcox MH, Wordsworth S, Wyllie D, Xu L, Crook DW; COMPASS-TB Study Group..

Lancet Respir Med. 2016 Jan;4(1):49-58. doi: 10.1016/S2213-2600(15)00466-X. Epub 2015 Dec 4.

6.

Evolutionary Trade-Offs Underlie the Multi-faceted Virulence of Staphylococcus aureus.

Laabei M, Uhlemann AC, Lowy FD, Austin ED, Yokoyama M, Ouadi K, Feil E, Thorpe HA, Williams B, Perkins M, Peacock SJ, Clarke SR, Dordel J, Holden M, Votintseva AA, Bowden R, Crook DW, Young BC, Wilson DJ, Recker M, Massey RC.

PLoS Biol. 2015 Sep 2;13(9):e1002229. doi: 10.1371/journal.pbio.1002229. eCollection 2015.

7.

Mycobacterial DNA extraction for whole-genome sequencing from early positive liquid (MGIT) cultures.

Votintseva AA, Pankhurst LJ, Anson LW, Morgan MR, Gascoyne-Binzi D, Walker TM, Quan TP, Wyllie DH, Del Ojo Elias C, Wilcox M, Walker AS, Peto TE, Crook DW.

J Clin Microbiol. 2015 Apr;53(4):1137-43. doi: 10.1128/JCM.03073-14. Epub 2015 Jan 28.

8.

Prevalence of Staphylococcus aureus protein A (spa) mutants in the community and hospitals in Oxfordshire.

Votintseva AA, Fung R, Miller RR, Knox K, Godwin H, Wyllie DH, Bowden R, Crook DW, Walker AS.

BMC Microbiol. 2014 Mar 12;14:63. doi: 10.1186/1471-2180-14-63.

9.

Multiple-strain colonization in nasal carriers of Staphylococcus aureus.

Votintseva AA, Miller RR, Fung R, Knox K, Godwin H, Peto TE, Crook DW, Bowden R, Walker AS.

J Clin Microbiol. 2014 Apr;52(4):1192-200. doi: 10.1128/JCM.03254-13. Epub 2014 Feb 5.

10.

Molecular adaptation during a rapid adaptive radiation.

Kapralov MV, Votintseva AA, Filatov DA.

Mol Biol Evol. 2013 May;30(5):1051-9. doi: 10.1093/molbev/mst013. Epub 2013 Jan 25.

11.

Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease.

Young BC, Golubchik T, Batty EM, Fung R, Larner-Svensson H, Votintseva AA, Miller RR, Godwin H, Knox K, Everitt RG, Iqbal Z, Rimmer AJ, Cule M, Ip CL, Didelot X, Harding RM, Donnelly P, Peto TE, Crook DW, Bowden R, Wilson DJ.

Proc Natl Acad Sci U S A. 2012 Mar 20;109(12):4550-5. doi: 10.1073/pnas.1113219109. Epub 2012 Mar 5.

12.

DNA polymorphism in recombining and non-recombining mating-type-specific loci of the smut fungus Microbotryum.

Votintseva AA, Filatov DA.

Heredity (Edinb). 2011 Jun;106(6):936-44. doi: 10.1038/hdy.2010.140. Epub 2010 Nov 17.

13.

Evolutionary strata in a small mating-type-specific region of the smut fungus Microbotryum violaceum.

Votintseva AA, Filatov DA.

Genetics. 2009 Aug;182(4):1391-6. doi: 10.1534/genetics.109.103192. Epub 2009 May 17.

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