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Items: 1 to 20 of 41


Revealing calcium fluxes by analyzing inhibition dynamics in action potential clamp.

Laasmaa M, Birkedal R, Vendelin M.

J Mol Cell Cardiol. 2016 Oct 1;100:93-108. doi: 10.1016/j.yjmcc.2016.08.015.


Metabolic compartmentation in rainbow trout cardiomyocytes: coupling of hexokinase but not creatine kinase to mitochondrial respiration.

Karro N, Sepp M, Jugai S, Laasmaa M, Vendelin M, Birkedal R.

J Comp Physiol B. 2016 Aug 13.


Restricted ADP movement in cardiomyocytes: Cytosolic diffusion obstacles are complemented with a small number of open mitochondrial voltage-dependent anion channels.

Simson P, Jepihhina N, Laasmaa M, Peterson P, Birkedal R, Vendelin M.

J Mol Cell Cardiol. 2016 Aug;97:197-203. doi: 10.1016/j.yjmcc.2016.04.012.


Cross-Bridge Group Ensembles Describing Cooperativity in Thermodynamically Consistent Way.

Kalda M, Peterson P, Vendelin M.

PLoS One. 2015 Sep 11;10(9):e0137438. doi: 10.1371/journal.pone.0137438.


The location of energetic compartments affects energetic communication in cardiomyocytes.

Birkedal R, Laasmaa M, Vendelin M.

Front Physiol. 2014 Sep 29;5:376. doi: 10.3389/fphys.2014.00376.


Tight coupling of Na+/K+-ATPase with glycolysis demonstrated in permeabilized rat cardiomyocytes.

Sepp M, Sokolova N, Jugai S, Mandel M, Peterson P, Vendelin M.

PLoS One. 2014 Jun 16;9(6):e99413. doi: 10.1371/journal.pone.0099413.


ADP protects cardiac mitochondria under severe oxidative stress.

Sokolova N, Pan S, Provazza S, Beutner G, Vendelin M, Birkedal R, Sheu SS.

PLoS One. 2013 Dec 13;8(12):e83214. doi: 10.1371/journal.pone.0083214.


Unchanged mitochondrial organization and compartmentation of high-energy phosphates in creatine-deficient GAMT-/- mouse hearts.

Branovets J, Sepp M, Kotlyarova S, Jepihhina N, Sokolova N, Aksentijevic D, Lygate CA, Neubauer S, Vendelin M, Birkedal R.

Am J Physiol Heart Circ Physiol. 2013 Aug 15;305(4):H506-20. doi: 10.1152/ajpheart.00919.2012.


Real-time determination of sarcomere length of a single cardiomyocyte during contraction.

Peterson P, Kalda M, Vendelin M.

Am J Physiol Cell Physiol. 2013 Mar;304(6):C519-31. doi: 10.1152/ajpcell.00032.2012.


Sensitivity analysis of flux determination in heart by H₂ ¹⁸O -provided labeling using a dynamic Isotopologue model of energy transfer pathways.

Schryer DW, Peterson P, Illaste A, Vendelin M.

PLoS Comput Biol. 2012;8(12):e1002795. doi: 10.1371/journal.pcbi.1002795.


Analysis of molecular movement reveals latticelike obstructions to diffusion in heart muscle cells.

Illaste A, Laasmaa M, Peterson P, Vendelin M.

Biophys J. 2012 Feb 22;102(4):739-48. doi: 10.1016/j.bpj.2012.01.012.


Molecular dynamics simulations of creatine kinase and adenine nucleotide translocase in mitochondrial membrane patch.

Karo J, Peterson P, Vendelin M.

J Biol Chem. 2012 Mar 2;287(10):7467-76. doi: 10.1074/jbc.M111.332320.


Permeabilized rat cardiomyocyte response demonstrates intracellular origin of diffusion obstacles.

Jepihhina N, Beraud N, Sepp M, Birkedal R, Vendelin M.

Biophys J. 2011 Nov 2;101(9):2112-21. doi: 10.1016/j.bpj.2011.09.025.


Symbolic flux analysis for genome-scale metabolic networks.

Schryer DW, Vendelin M, Peterson P.

BMC Syst Biol. 2011 May 23;5:81. doi: 10.1186/1752-0509-5-81.


Application of regularized Richardson-Lucy algorithm for deconvolution of confocal microscopy images.

Laasmaa M, Vendelin M, Peterson P.

J Microsc. 2011 Aug;243(2):124-40. doi: 10.1111/j.1365-2818.2011.03486.x.


Modulation of energy transfer pathways between mitochondria and myofibrils by changes in performance of perfused heart.

Vendelin M, Hoerter JA, Mateo P, Soboll S, Gillet B, Mazet JL.

J Biol Chem. 2010 Nov 26;285(48):37240-50. doi: 10.1074/jbc.M110.147116.


ADP compartmentation analysis reveals coupling between pyruvate kinase and ATPases in heart muscle.

Sepp M, Vendelin M, Vija H, Birkedal R.

Biophys J. 2010 Jun 16;98(12):2785-93. doi: 10.1016/j.bpj.2010.03.025.


Intracellular diffusion restrictions in isolated cardiomyocytes from rainbow trout.

Sokolova N, Vendelin M, Birkedal R.

BMC Cell Biol. 2009 Dec 17;10:90. doi: 10.1186/1471-2121-10-90.


Diffusion restrictions surrounding mitochondria: a mathematical model of heart muscle fibers.

Ramay HR, Vendelin M.

Biophys J. 2009 Jul 22;97(2):443-52. doi: 10.1016/j.bpj.2009.04.062.


Bidirectionality and compartmentation of metabolic fluxes are revealed in the dynamics of isotopomer networks.

Schryer DW, Peterson P, Paalme T, Vendelin M.

Int J Mol Sci. 2009 Apr 17;10(4):1697-718. doi: 10.3390/ijms10041697. Review.

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