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Items: 1 to 20 of 70

1.

High-resolution magnetic resonance imaging reveals nuclei of the human amygdala: manual segmentation to automatic atlas.

Saygin ZM, Kliemann D, Iglesias JE, van der Kouwe AJW, Boyd E, Reuter M, Stevens A, Van Leemput K, McKee A, Frosch MP, Fischl B, Augustinack JC; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage. 2017 Jul 15;155:370-382. doi: 10.1016/j.neuroimage.2017.04.046. Epub 2017 May 4.

PMID:
28479476
2.

A machine learning method for fast and accurate characterization of depth-of-interaction gamma cameras.

Pedemonte S, Pierce L, Van Leemput K.

Phys Med Biol. 2017 Apr 24. doi: 10.1088/1361-6560/aa6ee5. [Epub ahead of print]

PMID:
28436919
3.

PET/MRI in the Presence of Metal Implants: Completion of the Attenuation Map from PET Emission Data.

Fuin N, Pedemonte S, Catalano OA, Izquierdo-Garcia D, Soricelli A, Salvatore M, Heberlein K, Hooker JM, Van Leemput K, Catana C.

J Nucl Med. 2017 May;58(5):840-845. doi: 10.2967/jnumed.116.183343. Epub 2017 Jan 26.

PMID:
28126884
4.

Fast and sequence-adaptive whole-brain segmentation using parametric Bayesian modeling.

Puonti O, Iglesias JE, Van Leemput K.

Neuroimage. 2016 Dec;143:235-249. doi: 10.1016/j.neuroimage.2016.09.011. Epub 2016 Sep 7.

5.

A patch-based pseudo-CT approach for MRI-only radiotherapy in the pelvis.

Andreasen D, Van Leemput K, Edmund JM.

Med Phys. 2016 Aug;43(8):4742. doi: 10.1118/1.4958676.

PMID:
27487892
6.

Bayesian longitudinal segmentation of hippocampal substructures in brain MRI using subject-specific atlases.

Iglesias JE, Van Leemput K, Augustinack J, Insausti R, Fischl B, Reuter M; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage. 2016 Nov 1;141:542-555. doi: 10.1016/j.neuroimage.2016.07.020. Epub 2016 Jul 15.

7.

Regional Hippocampal Atrophy and Higher Levels of Plasma Amyloid-Beta Are Associated With Subjective Memory Complaints in Nondemented Elderly Subjects.

Cantero JL, Iglesias JE, Van Leemput K, Atienza M.

J Gerontol A Biol Sci Med Sci. 2016 Sep;71(9):1210-5. doi: 10.1093/gerona/glw022. Epub 2016 Mar 4.

PMID:
26946100
8.

A Generative Probabilistic Model and Discriminative Extensions for Brain Lesion Segmentation--With Application to Tumor and Stroke.

Menze BH, Van Leemput K, Lashkari D, Riklin-Raviv T, Geremia E, Alberts E, Gruber P, Wegener S, Weber MA, Szekely G, Ayache N, Golland P.

IEEE Trans Med Imaging. 2016 Apr;35(4):933-46. doi: 10.1109/TMI.2015.2502596. Epub 2015 Nov 20.

9.

Cone beam computed tomography guided treatment delivery and planning verification for magnetic resonance imaging only radiotherapy of the brain.

Edmund JM, Andreasen D, Mahmood F, Van Leemput K.

Acta Oncol. 2015;54(9):1496-500. doi: 10.3109/0284186X.2015.1062546. Epub 2015 Jul 22.

PMID:
26198652
10.

A computational atlas of the hippocampal formation using ex vivo, ultra-high resolution MRI: Application to adaptive segmentation of in vivo MRI.

Iglesias JE, Augustinack JC, Nguyen K, Player CM, Player A, Wright M, Roy N, Frosch MP, McKee AC, Wald LL, Fischl B, Van Leemput K; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage. 2015 Jul 15;115:117-37. doi: 10.1016/j.neuroimage.2015.04.042. Epub 2015 Apr 29.

11.

Patch-based generation of a pseudo CT from conventional MRI sequences for MRI-only radiotherapy of the brain.

Andreasen D, Van Leemput K, Hansen RH, Andersen JA, Edmund JM.

Med Phys. 2015 Apr;42(4):1596-605. doi: 10.1118/1.4914158.

PMID:
25832050
12.

Bayesian segmentation of brainstem structures in MRI.

Iglesias JE, Van Leemput K, Bhatt P, Casillas C, Dutt S, Schuff N, Truran-Sacrey D, Boxer A, Fischl B; Alzheimer's Disease Neuroimaging Initiative.

Neuroimage. 2015 Jun;113:184-95. doi: 10.1016/j.neuroimage.2015.02.065. Epub 2015 Mar 14.

13.

Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: towards a harmonized segmentation protocol.

Yushkevich PA, Amaral RS, Augustinack JC, Bender AR, Bernstein JD, Boccardi M, Bocchetta M, Burggren AC, Carr VA, Chakravarty MM, Chételat G, Daugherty AM, Davachi L, Ding SL, Ekstrom A, Geerlings MI, Hassan A, Huang Y, Iglesias JE, La Joie R, Kerchner GA, LaRocque KF, Libby LA, Malykhin N, Mueller SG, Olsen RK, Palombo DJ, Parekh MB, Pluta JB, Preston AR, Pruessner JC, Ranganath C, Raz N, Schlichting ML, Schoemaker D, Singh S, Stark CE, Suthana N, Tompary A, Turowski MM, Van Leemput K, Wagner AD, Wang L, Winterburn JL, Wisse LE, Yassa MA, Zeineh MM; Hippocampal Subfields Group (HSG).

Neuroimage. 2015 May 1;111:526-41. doi: 10.1016/j.neuroimage.2015.01.004. Epub 2015 Jan 14.

14.

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Menze BH, Jakab A, Bauer S, Kalpathy-Cramer J, Farahani K, Kirby J, Burren Y, Porz N, Slotboom J, Wiest R, Lanczi L, Gerstner E, Weber MA, Arbel T, Avants BB, Ayache N, Buendia P, Collins DL, Cordier N, Corso JJ, Criminisi A, Das T, Delingette H, Demiralp Ç, Durst CR, Dojat M, Doyle S, Festa J, Forbes F, Geremia E, Glocker B, Golland P, Guo X, Hamamci A, Iftekharuddin KM, Jena R, John NM, Konukoglu E, Lashkari D, Mariz JA, Meier R, Pereira S, Precup D, Price SJ, Raviv TR, Reza SM, Ryan M, Sarikaya D, Schwartz L, Shin HC, Shotton J, Silva CA, Sousa N, Subbanna NK, Szekely G, Taylor TJ, Thomas OM, Tustison NJ, Unal G, Vasseur F, Wintermark M, Ye DH, Zhao L, Zhao B, Zikic D, Prastawa M, Reyes M, Van Leemput K.

IEEE Trans Med Imaging. 2015 Oct;34(10):1993-2024. doi: 10.1109/TMI.2014.2377694. Epub 2014 Dec 4. Review.

15.

An algorithm for optimal fusion of atlases with different labeling protocols.

Iglesias JE, Sabuncu MR, Aganj I, Bhatt P, Casillas C, Salat D, Boxer A, Fischl B, Van Leemput K.

Neuroimage. 2015 Feb 1;106:451-63. doi: 10.1016/j.neuroimage.2014.11.031. Epub 2014 Nov 22.

16.

A voxel-based investigation for MRI-only radiotherapy of the brain using ultra short echo times.

Edmund JM, Kjer HM, Van Leemput K, Hansen RH, Andersen JA, Andreasen D.

Phys Med Biol. 2014 Dec 7;59(23):7501-19. doi: 10.1088/0031-9155/59/23/7501. Epub 2014 Nov 13.

PMID:
25393873
17.

A cautionary analysis of STAPLE using direct inference of segmentation truth.

Van Leemput K, Sabuncu MR.

Med Image Comput Comput Assist Interv. 2014;17(Pt 1):398-406.

PMID:
25333143
18.

A probabilistic, non-parametric framework for inter-modality label fusion.

Iglesias JE, Sabuncu MR, Van Leemput K.

Med Image Comput Comput Assist Interv. 2013;16(Pt 3):576-83.

19.

Fast, sequence adaptive parcellation of brain MR using parametric models.

Puonti O, Iglesias JE, Van Leemput K.

Med Image Comput Comput Assist Interv. 2013;16(Pt 1):727-34.

20.

Is synthesizing MRI contrast useful for inter-modality analysis?

Iglesias JE, Konukoglu E, Zikic D, Glocker B, Van Leemput K, Fischl B.

Med Image Comput Comput Assist Interv. 2013;16(Pt 1):631-8.

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