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Items: 1 to 20 of 37

1.

Comparative Genomics Reveals Accelerated Evolution in Conserved Pathways during the Diversification of Anole Lizards.

Tollis M, Hutchins ED, Stapley J, Rupp SM, Eckalbar WL, Maayan I, Lasku E, Infante CR, Dennis SR, Robertson JA, May CM, Crusoe MR, Bermingham E, DeNardo DF, Hsieh ST, Kulathinal RJ, McMillan WO, Menke DB, Pratt SC, Rawls JA, Sanjur O, Wilson-Rawls J, Wilson Sayres MA, Fisher RE, Kusumi K.

Genome Biol Evol. 2018 Feb 1;10(2):489-506. doi: 10.1093/gbe/evy013.

2.

Correction to 'Variation in recombination frequency and distribution across eukaryotes: patterns and processes'.

Stapley J, Feulner PGD, Johnston SE, Santure AW, Smadja CM.

Philos Trans R Soc Lond B Biol Sci. 2018 Feb 5;373(1739). pii: 20170360. doi: 10.1098/rstb.2017.0360. No abstract available.

3.

Recombination: the good, the bad and the variable.

Stapley J, Feulner PGD, Johnston SE, Santure AW, Smadja CM.

Philos Trans R Soc Lond B Biol Sci. 2017 Dec 19;372(1736). pii: 20170279. doi: 10.1098/rstb.2017.0279.

4.

Variation in recombination frequency and distribution across eukaryotes: patterns and processes.

Stapley J, Feulner PGD, Johnston SE, Santure AW, Smadja CM.

Philos Trans R Soc Lond B Biol Sci. 2017 Dec 19;372(1736). pii: 20160455. doi: 10.1098/rstb.2016.0455. Review. Erratum in: Philos Trans R Soc Lond B Biol Sci. 2018 Feb 5;373(1739):null.

5.

The genomic basis of eco-evolutionary dynamics.

Rodríguez-Verdugo A, Buckley J, Stapley J.

Mol Ecol. 2017 Mar;26(6):1456-1464. doi: 10.1111/mec.14045. Epub 2017 Mar 8. Review.

PMID:
28160333
6.

Can Evolution Supply What Ecology Demands?

Kokko H, Chaturvedi A, Croll D, Fischer MC, Guillaume F, Karrenberg S, Kerr B, Rolshausen G, Stapley J.

Trends Ecol Evol. 2017 Mar;32(3):187-197. doi: 10.1016/j.tree.2016.12.005. Epub 2017 Jan 11. Review.

PMID:
28087070
7.

Red Carotenoid Coloration in the Zebra Finch Is Controlled by a Cytochrome P450 Gene Cluster.

Mundy NI, Stapley J, Bennison C, Tucker R, Twyman H, Kim KW, Burke T, Birkhead TR, Andersson S, Slate J.

Curr Biol. 2016 Jun 6;26(11):1435-40. doi: 10.1016/j.cub.2016.04.047. Epub 2016 May 19.

8.

Long-term data reveal a population decline of the tropical lizard Anolis apletophallus, and a negative affect of el nino years on population growth rate.

Stapley J, Garcia M, Andrews RM.

PLoS One. 2015 Feb 11;10(2):e0115450. doi: 10.1371/journal.pone.0115450. eCollection 2015.

9.

Transposable elements as agents of rapid adaptation may explain the genetic paradox of invasive species.

Stapley J, Santure AW, Dennis SR.

Mol Ecol. 2015 May;24(9):2241-52. doi: 10.1111/mec.13089. Epub 2015 Feb 16. Review.

PMID:
25611725
10.

Developing a community-based genetic nomenclature for anole lizards.

Kusumi K, Kulathinal RJ, Abzhanov A, Boissinot S, Crawford NG, Faircloth BC, Glenn TC, Janes DE, Losos JB, Menke DB, Poe S, Sanger TJ, Schneider CJ, Stapley J, Wade J, Wilson-Rawls J.

BMC Genomics. 2011 Nov 11;12:554. doi: 10.1186/1471-2164-12-554.

11.

Genetic mapping of the major histocompatibility complex in the zebra finch (Taeniopygia guttata).

Ekblom R, Stapley J, Ball AD, Birkhead T, Burke T, Slate J.

Immunogenetics. 2011 Aug;63(8):523-30. doi: 10.1007/s00251-011-0528-6. Epub 2011 Apr 15.

PMID:
21494955
12.

Mining online genomic resources in Anolis carolinensis facilitates rapid and inexpensive development of cross-species microsatellite markers for the Anolis lizard genus.

Wordley C, Slate J, Stapley J.

Mol Ecol Resour. 2011 Jan;11(1):126-33. doi: 10.1111/j.1755-0998.2010.02863.x.

PMID:
21429109
13.

Stock structure of blue threadfin Eleutheronema tetradactylum across northern Australia, as indicated by parasites.

Moore BR, Stapley J, Allsop Q, Newman SJ, Ballagh A, Welch DJ, Lester RJ.

J Fish Biol. 2011 Mar;78(3):923-36. doi: 10.1111/j.1095-8649.2011.02917.x.

PMID:
21366582
14.

Adaptation genomics: the next generation.

Stapley J, Reger J, Feulner PG, Smadja C, Galindo J, Ekblom R, Bennison C, Ball AD, Beckerman AP, Slate J.

Trends Ecol Evol. 2010 Dec;25(12):705-12. doi: 10.1016/j.tree.2010.09.002. Epub 2010 Oct 16. Review.

PMID:
20952088
15.

No evidence of genetic differentiation between anoles with different dewlap color patterns.

Stapley J, Wordley C, Slate J.

J Hered. 2011 Jan-Feb;102(1):118-24. doi: 10.1093/jhered/esq104. Epub 2010 Sep 22.

PMID:
20861275
16.

The genome of a songbird.

Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Künstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Lin YC, George J, Sweedler J, Southey B, Gunaratne P, Watson M, Nam K, Backström N, Smeds L, Nabholz B, Itoh Y, Whitney O, Pfenning AR, Howard J, Völker M, Skinner BM, Griffin DK, Ye L, McLaren WM, Flicek P, Quesada V, Velasco G, Lopez-Otin C, Puente XS, Olender T, Lancet D, Smit AF, Hubley R, Konkel MK, Walker JA, Batzer MA, Gu W, Pollock DD, Chen L, Cheng Z, Eichler EE, Stapley J, Slate J, Ekblom R, Birkhead T, Burke T, Burt D, Scharff C, Adam I, Richard H, Sultan M, Soldatov A, Lehrach H, Edwards SV, Yang SP, Li X, Graves T, Fulton L, Nelson J, Chinwalla A, Hou S, Mardis ER, Wilson RK.

Nature. 2010 Apr 1;464(7289):757-62. doi: 10.1038/nature08819.

17.

A comparison of SNPs and microsatellites as linkage mapping markers: lessons from the zebra finch (Taeniopygia guttata).

Ball AD, Stapley J, Dawson DA, Birkhead TR, Burke T, Slate J.

BMC Genomics. 2010 Apr 1;11:218. doi: 10.1186/1471-2164-11-218.

18.

Pronounced inter- and intrachromosomal variation in linkage disequilibrium across the zebra finch genome.

Stapley J, Birkhead TR, Burke T, Slate J.

Genome Res. 2010 Apr;20(4):496-502. doi: 10.1101/gr.102095.109. Epub 2010 Mar 31.

19.

On the use of large marker panels to estimate inbreeding and relatedness: empirical and simulation studies of a pedigreed zebra finch population typed at 771 SNPs.

Santure AW, Stapley J, Ball AD, Birkhead TR, Burke T, Slate J.

Mol Ecol. 2010 Apr;19(7):1439-51. doi: 10.1111/j.1365-294X.2010.04554.x. Epub 2010 Feb 10.

PMID:
20149098
20.

Training parents of children with life-long and life-limiting conditions in the art of massage.

Powell L, Stapley J.

Complement Ther Clin Pract. 2008 Nov;14(4):237-43. doi: 10.1016/j.ctcp.2008.03.002. Epub 2008 May 15.

PMID:
18940710

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