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Items: 8


The E. coli molecular phenotype under different growth conditions.

Caglar MU, Houser JR, Barnhart CS, Boutz DR, Carroll SM, Dasgupta A, Lenoir WF, Smith BL, Sridhara V, Sydykova DK, Vander Wood D, Marx CJ, Marcotte EM, Barrick JE, Wilke CO.

Sci Rep. 2017 Apr 18;7:45303. doi: 10.1038/srep45303.


Large-scale analysis of post-translational modifications in E. coli under glucose-limiting conditions.

Brown CW, Sridhara V, Boutz DR, Person MD, Marcotte EM, Barrick JE, Wilke CO.

BMC Genomics. 2017 Apr 17;18(1):301. doi: 10.1186/s12864-017-3676-8.


Stable association of RNAi machinery is conserved between the cytoplasm and nucleus of human cells.

Kalantari R, Hicks JA, Li L, Gagnon KT, Sridhara V, Lemoff A, Mirzaei H, Corey DR.

RNA. 2016 Jul;22(7):1085-98. doi: 10.1261/rna.056499.116. Epub 2016 May 19.


Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation.

Houser JR, Barnhart C, Boutz DR, Carroll SM, Dasgupta A, Michener JK, Needham BD, Papoulas O, Sridhara V, Sydykova DK, Marx CJ, Trent MS, Barrick JE, Marcotte EM, Wilke CO.

PLoS Comput Biol. 2015 Aug 14;11(8):e1004400. doi: 10.1371/journal.pcbi.1004400. eCollection 2015 Aug.


Predicting growth conditions from internal metabolic fluxes in an in-silico model of E. coli.

Sridhara V, Meyer AG, Rai P, Barrick JE, Ravikumar P, Segrè D, Wilke CO.

PLoS One. 2014 Dec 12;9(12):e114608. doi: 10.1371/journal.pone.0114608. eCollection 2014.


Increasing peptide identifications and decreasing search times for ETD spectra by pre-processing and calculation of parent precursor charge.

Sridhara V, Bai DL, Chi A, Shabanowitz J, Hunt DF, Bryant SH, Geer LY.

Proteome Sci. 2012 Feb 9;10(1):8. doi: 10.1186/1477-5956-10-8.


Al2O3-based nanofluids: a review.

Sridhara V, Satapathy LN.

Nanoscale Res Lett. 2011 Jul 16;6:456. doi: 10.1186/1556-276X-6-456.


Automatic annotation of experimentally derived, evolutionarily conserved post-translational modifications onto multiple genomes.

Sridhara V, Marchler-Bauer A, Bryant SH, Geer LY.

Database (Oxford). 2011 May 13;2011:bar019. doi: 10.1093/database/bar019. Print 2011.

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