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Items: 1 to 20 of 24

1.

Getting to the heart of influenza.

Yewdell JW, Spiro DJ, Golding H, Quill H, Mittelman A, Nabel GJ.

Sci Transl Med. 2013 Jun 26;5(191):191ed8. doi: 10.1126/scitranslmed.3006735. No abstract available.

2.

Molecular signature of high yield (growth) influenza a virus reassortants prepared as candidate vaccine seeds.

Ramanunninair M, Le J, Onodera S, Fulvini AA, Pokorny BA, Silverman J, Devis R, Arroyo JM, He Y, Boyne A, Bera J, Halpin R, Hine E, Spiro DJ, Bucher D.

PLoS One. 2013 Jun 11;8(6):e65955. doi: 10.1371/journal.pone.0065955. Print 2013.

3.

Spike protein fusion peptide and feline coronavirus virulence.

Chang HW, Egberink HF, Halpin R, Spiro DJ, Rottier PJ.

Emerg Infect Dis. 2012 Jul;18(7):1089-95. doi: 10.3201/eid1807.120143.

4.

Dual infection of novel influenza viruses A/H1N1 and A/H3N2 in a cluster of Cambodian patients.

Myers CA, Kasper MR, Yasuda CY, Savuth C, Spiro DJ, Halpin R, Faix DJ, Coon R, Putnam SD, Wierzba TF, Blair PJ.

Am J Trop Med Hyg. 2011 Nov;85(5):961-3. doi: 10.4269/ajtmh.2011.11-0098.

5.

Migratory flyway and geographical distance are barriers to the gene flow of influenza virus among North American birds.

Lam TT, Ip HS, Ghedin E, Wentworth DE, Halpin RA, Stockwell TB, Spiro DJ, Dusek RJ, Bortner JB, Hoskins J, Bales BD, Yparraguirre DR, Holmes EC.

Ecol Lett. 2012 Jan;15(1):24-33. doi: 10.1111/j.1461-0248.2011.01703.x. Epub 2011 Oct 18.

6.

Genomic and protein structural maps of adaptive evolution of human influenza A virus to increased virulence in the mouse.

Ping J, Keleta L, Forbes NE, Dankar S, Stecho W, Tyler S, Zhou Y, Babiuk L, Weingartl H, Halpin RA, Boyne A, Bera J, Hostetler J, Fedorova NB, Proudfoot K, Katzel DA, Stockwell TB, Ghedin E, Spiro DJ, Brown EG.

PLoS One. 2011;6(6):e21740. doi: 10.1371/journal.pone.0021740. Epub 2011 Jun 30.

7.

Intra-genotypic diversity of archival G4P[8] human rotaviruses from Washington, DC.

McDonald SM, Davis K, McAllen JK, Spiro DJ, Patton JT.

Infect Genet Evol. 2011 Oct;11(7):1586-94. doi: 10.1016/j.meegid.2011.05.023. Epub 2011 Jun 25.

8.

Molecular characterization of a new species in the genus Alphacoronavirus associated with mink epizootic catarrhal gastroenteritis.

Vlasova AN, Halpin R, Wang S, Ghedin E, Spiro DJ, Saif LJ.

J Gen Virol. 2011 Jun;92(Pt 6):1369-79. doi: 10.1099/vir.0.025353-0. Epub 2011 Feb 23.

9.

Deep sequencing reveals mixed infection with 2009 pandemic influenza A (H1N1) virus strains and the emergence of oseltamivir resistance.

Ghedin E, Laplante J, DePasse J, Wentworth DE, Santos RP, Lepow ML, Porter J, Stellrecht K, Lin X, Operario D, Griesemer S, Fitch A, Halpin RA, Stockwell TB, Spiro DJ, Holmes EC, St George K.

J Infect Dis. 2011 Jan 15;203(2):168-74. doi: 10.1093/infdis/jiq040.

10.

Phylogeography of the spring and fall waves of the H1N1/09 pandemic influenza virus in the United States.

Nelson MI, Tan Y, Ghedin E, Wentworth DE, St George K, Edelman L, Beck ET, Fan J, Lam TT, Kumar S, Spiro DJ, Simonsen L, Viboud C, Holmes EC, Henrickson KJ, Musser JM.

J Virol. 2011 Jan;85(2):828-34. doi: 10.1128/JVI.01762-10. Epub 2010 Nov 10.

11.

PB2 residue 158 is a pathogenic determinant of pandemic H1N1 and H5 influenza a viruses in mice.

Zhou B, Li Y, Halpin R, Hine E, Spiro DJ, Wentworth DE.

J Virol. 2011 Jan;85(1):357-65. doi: 10.1128/JVI.01694-10. Epub 2010 Oct 20.

12.

ANDES: Statistical tools for the ANalyses of DEep Sequencing.

Li K, Venter E, Yooseph S, Stockwell TB, Eckerle LD, Denison MR, Spiro DJ, Methé BA.

BMC Res Notes. 2010 Jul 15;3:199. doi: 10.1186/1756-0500-3-199.

13.

Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing.

Eckerle LD, Becker MM, Halpin RA, Li K, Venter E, Lu X, Scherbakova S, Graham RL, Baric RS, Stockwell TB, Spiro DJ, Denison MR.

PLoS Pathog. 2010 May 6;6(5):e1000896. doi: 10.1371/journal.ppat.1000896.

14.

Unseasonal transmission of H3N2 influenza A virus during the swine-origin H1N1 pandemic.

Ghedin E, Wentworth DE, Halpin RA, Lin X, Bera J, DePasse J, Fitch A, Griesemer S, Hine E, Katzel DA, Overton L, Proudfoot K, Sitz J, Szczypinski B, StGeorge K, Spiro DJ, Holmes EC.

J Virol. 2010 Jun;84(11):5715-8. doi: 10.1128/JVI.00018-10. Epub 2010 Mar 17.

15.

Evolutionary dynamics of human rotaviruses: balancing reassortment with preferred genome constellations.

McDonald SM, Matthijnssens J, McAllen JK, Hine E, Overton L, Wang S, Lemey P, Zeller M, Van Ranst M, Spiro DJ, Patton JT.

PLoS Pathog. 2009 Oct;5(10):e1000634. doi: 10.1371/journal.ppat.1000634. Epub 2009 Oct 23.

16.

Metagenomic analysis of RNA viruses in a fresh water lake.

Djikeng A, Kuzmickas R, Anderson NG, Spiro DJ.

PLoS One. 2009 Sep 29;4(9):e7264. doi: 10.1371/journal.pone.0007264.

17.

Mixed infection and the genesis of influenza virus diversity.

Ghedin E, Fitch A, Boyne A, Griesemer S, DePasse J, Bera J, Zhang X, Halpin RA, Smit M, Jennings L, St George K, Holmes EC, Spiro DJ.

J Virol. 2009 Sep;83(17):8832-41. doi: 10.1128/JVI.00773-09. Epub 2009 Jun 24.

18.

Molecular epidemiology of A/H3N2 and A/H1N1 influenza virus during a single epidemic season in the United States.

Nelson MI, Edelman L, Spiro DJ, Boyne AR, Bera J, Halpin R, Sengamalay N, Ghedin E, Miller MA, Simonsen L, Viboud C, Holmes EC.

PLoS Pathog. 2008 Aug 22;4(8):e1000133. doi: 10.1371/journal.ppat.1000133. Erratum in: PLoS Pathog. 2008 Dec;4(12). doi.org//10.1371/annotation/1391941e-93d3-48d3-8c9a-b7c6d98f9527.. Sengamalay, Naomi [added].

19.

The evolutionary genetics and emergence of avian influenza viruses in wild birds.

Dugan VG, Chen R, Spiro DJ, Sengamalay N, Zaborsky J, Ghedin E, Nolting J, Swayne DE, Runstadler JA, Happ GM, Senne DA, Wang R, Slemons RD, Holmes EC, Taubenberger JK.

PLoS Pathog. 2008 May 30;4(5):e1000076. doi: 10.1371/journal.ppat.1000076.

20.

Multiple reassortment events in the evolutionary history of H1N1 influenza A virus since 1918.

Nelson MI, Viboud C, Simonsen L, Bennett RT, Griesemer SB, St George K, Taylor J, Spiro DJ, Sengamalay NA, Ghedin E, Taubenberger JK, Holmes EC.

PLoS Pathog. 2008 Feb 29;4(2):e1000012. doi: 10.1371/journal.ppat.1000012.

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