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Items: 9

1.

Simul-seq: combined DNA and RNA sequencing for whole-genome and transcriptome profiling.

Reuter JA, Spacek DV, Pai RK, Snyder MP.

Nat Methods. 2016 Nov;13(11):953-958. doi: 10.1038/nmeth.4028. Epub 2016 Oct 10.

PMID:
27723755
2.

Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions.

Grubert F, Zaugg JB, Kasowski M, Ursu O, Spacek DV, Martin AR, Greenside P, Srivas R, Phanstiel DH, Pekowska A, Heidari N, Euskirchen G, Huber W, Pritchard JK, Bustamante CD, Steinmetz LM, Kundaje A, Snyder M.

Cell. 2015 Aug 27;162(5):1051-65. doi: 10.1016/j.cell.2015.07.048. Epub 2015 Aug 20.

3.

Recurrent somatic mutations in regulatory regions of human cancer genomes.

Melton C, Reuter JA, Spacek DV, Snyder M.

Nat Genet. 2015 Jul;47(7):710-6. doi: 10.1038/ng.3332. Epub 2015 Jun 8.

4.

High-throughput sequencing technologies.

Reuter JA, Spacek DV, Snyder MP.

Mol Cell. 2015 May 21;58(4):586-97. doi: 10.1016/j.molcel.2015.05.004. Review.

5.

Extensive variation in chromatin states across humans.

Kasowski M, Kyriazopoulou-Panagiotopoulou S, Grubert F, Zaugg JB, Kundaje A, Liu Y, Boyle AP, Zhang QC, Zakharia F, Spacek DV, Li J, Xie D, Olarerin-George A, Steinmetz LM, Hogenesch JB, Kellis M, Batzoglou S, Snyder M.

Science. 2013 Nov 8;342(6159):750-2. doi: 10.1126/science.1242510. Epub 2013 Oct 17.

6.

The juvenile alopecia mutation (jal) maps to mouse Chromosome 2, and is an allele of GATA binding protein 3 (Gata3).

Ramirez F, Feliciano AM, Adkins EB, Child KM, Radden LA 2nd, Salas A, Vila-Santana N, HorĂ¡k JM, Hughes SR, Spacek DV, King TR.

BMC Genet. 2013 May 9;14:40. doi: 10.1186/1471-2156-14-40.

7.

The wooly mutation (wly) on mouse chromosome 11 is associated with a genetic defect in Fam83g.

Radden LA 2nd, Child KM, Adkins EB, Spacek DV, Feliciano AM, King TR.

BMC Res Notes. 2013 May 9;6:189. doi: 10.1186/1756-0500-6-189.

8.

The mouse frizzy (fr) and rat 'hairless' (frCR) mutations are natural variants of protease serine S1 family member 8 (Prss8).

Spacek DV, Perez AF, Ferranti KM, Wu LK, Moy DM, Magnan DR, King TR.

Exp Dermatol. 2010 Jun;19(6):527-32. doi: 10.1111/j.1600-0625.2009.01054.x. Epub 2010 Feb 25.

PMID:
20201958
9.

The male sterility and histoincompatibility (mshi) mutation in mice is a natural variant of microtubule-associated protein 7 (Mtap7).

Magnan DR, Spacek DV, Ye N, Lu YC, King TR.

Mol Genet Metab. 2009 Jun;97(2):155-62. doi: 10.1016/j.ymgme.2009.02.010. Epub 2009 Mar 5.

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