Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 20 of 171

1.

Convergent Evolution of Slick Coat in Cattle through Truncation Mutations in the Prolactin Receptor.

Porto-Neto LR, Bickhart DM, Landaeta-Hernandez AJ, Utsunomiya YT, Pagan M, Jimenez E, Hansen PJ, Dikmen S, Schroeder SG, Kim ES, Sun J, Crespo E, Amati N, Cole JB, Null DJ, Garcia JF, Reverter A, Barendse W, Sonstegard TS.

Front Genet. 2018 Feb 23;9:57. doi: 10.3389/fgene.2018.00057. eCollection 2018.

2.

A PLAG1 mutation contributed to stature recovery in modern cattle.

Utsunomiya YT, Milanesi M, Utsunomiya ATH, Torrecilha RBP, Kim ES, Costa MS, Aguiar TS, Schroeder S, do Carmo AS, Carvalheiro R, Neves HHR, Padula RCM, Sussai TS, Zavarez LB, Cipriano RS, Caminhas MMT, Hambrecht G, Colli L, Eufemi E, Ajmone-Marsan P, Cesana D, Sannazaro M, Buora M, Morgante M, Liu G, Bickhart D, Van Tassell CP, Sölkner J, Sonstegard TS, Garcia JF.

Sci Rep. 2017 Dec 7;7(1):17140. doi: 10.1038/s41598-017-17127-1.

3.

Design and validation of a 90K SNP genotyping assay for the water buffalo (Bubalus bubalis).

Iamartino D, Nicolazzi EL, Van Tassell CP, Reecy JM, Fritz-Waters ER, Koltes JE, Biffani S, Sonstegard TS, Schroeder SG, Ajmone-Marsan P, Negrini R, Pasquariello R, Ramelli P, Coletta A, Garcia JF, Ali A, Ramunno L, Cosenza G, de Oliveira DAA, Drummond MG, Bastianetto E, Davassi A, Pirani A, Brew F, Williams JL.

PLoS One. 2017 Oct 5;12(10):e0185220. doi: 10.1371/journal.pone.0185220. eCollection 2017.

4.

Whole genome structural analysis of Caribbean hair sheep reveals quantitative link to West African ancestry.

Spangler GL, Rosen BD, Ilori MB, Hanotte O, Kim ES, Sonstegard TS, Burke JM, Morgan JLM, Notter DR, Van Tassell CP.

PLoS One. 2017 Jun 29;12(6):e0179021. doi: 10.1371/journal.pone.0179021. eCollection 2017.

5.

Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.

Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, Zhou Y, Sun J, Crisà A, Ponce de León FA, Schwartz JC, Hammond JA, Waldbieser GC, Schroeder SG, Liu GE, Dunham MJ, Shendure J, Sonstegard TS, Phillippy AM, Van Tassell CP, Smith TP.

Nat Genet. 2017 Apr;49(4):643-650. doi: 10.1038/ng.3802. Epub 2017 Mar 6.

6.

Genome-Wide microRNA Binding Site Variation between Extinct Wild Aurochs and Modern Cattle Identifies Candidate microRNA-Regulated Domestication Genes.

Braud M, Magee DA, Park SD, Sonstegard TS, Waters SM, MacHugh DE, Spillane C.

Front Genet. 2017 Jan 31;8:3. doi: 10.3389/fgene.2017.00003. eCollection 2017.

7.

Systematic Profiling of Short Tandem Repeats in the Cattle Genome.

Xu L, Haasl RJ, Sun J, Zhou Y, Bickhart DM, Li J, Song J, Sonstegard TS, Van Tassell CP, Lewin HA, Liu GE.

Genome Biol Evol. 2017 Jan 1;9(1):20-31. doi: 10.1093/gbe/evw256.

8.

Elucidating the genetic basis of an oligogenic birth defect using whole genome sequence data in a non-model organism, Bubalus bubalis.

Whitacre LK, Hoff JL, Schnabel RD, Albarella S, Ciotola F, Peretti V, Strozzi F, Ferrandi C, Ramunno L, Sonstegard TS, Williams JL, Taylor JF, Decker JE.

Sci Rep. 2017 Jan 3;7:39719. doi: 10.1038/srep39719.

9.

Genomic Selection in Dairy Cattle: The USDA Experience.

Wiggans GR, Cole JB, Hubbard SM, Sonstegard TS.

Annu Rev Anim Biosci. 2017 Feb 8;5:309-327. doi: 10.1146/annurev-animal-021815-111422. Epub 2016 Nov 16. Review.

PMID:
27860491
10.

Reduced representation bisulphite sequencing of ten bovine somatic tissues reveals DNA methylation patterns and their impacts on gene expression.

Zhou Y, Xu L, Bickhart DM, Abdel Hay EH, Schroeder SG, Connor EE, Alexander LJ, Sonstegard TS, Van Tassell CP, Chen H, Liu GE.

BMC Genomics. 2016 Oct 6;17(1):779.

11.

Pleiotropic Genes Affecting Carcass Traits in Bos indicus (Nellore) Cattle Are Modulators of Growth.

G T Pereira A, Utsunomiya YT, Milanesi M, Torrecilha RB, Carmo AS, Neves HH, Carvalheiro R, Ajmone-Marsan P, Sonstegard TS, Sölkner J, Contreras-Castillo CJ, Garcia JF.

PLoS One. 2016 Jul 13;11(7):e0158165. doi: 10.1371/journal.pone.0158165. eCollection 2016.

12.

Comparative analyses across cattle genders and breeds reveal the pitfalls caused by false positive and lineage-differential copy number variations.

Zhou Y, Utsunomiya YT, Xu L, Hay el HA, Bickhart DM, Sonstegard TS, Van Tassell CP, Garcia JF, Liu GE.

Sci Rep. 2016 Jul 6;6:29219. doi: 10.1038/srep29219.

13.

Identification of a nonsense mutation in APAF1 that is likely causal for a decrease in reproductive efficiency in Holstein dairy cattle.

Adams HA, Sonstegard TS, VanRaden PM, Null DJ, Van Tassell CP, Larkin DM, Lewin HA.

J Dairy Sci. 2016 Aug;99(8):6693-6701. doi: 10.3168/jds.2015-10517. Epub 2016 Jun 8.

PMID:
27289157
14.

Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus.

Zhou Y, Utsunomiya YT, Xu L, Hay el HA, Bickhart DM, Alexandre PA, Rosen BD, Schroeder SG, Carvalheiro R, de Rezende Neves HH, Sonstegard TS, Van Tassell CP, Ferraz JB, Fukumasu H, Garcia JF, Liu GE.

BMC Genomics. 2016 Jun 1;17:419. doi: 10.1186/s12864-016-2461-4.

15.

Integrated metabolomic and transcriptome analyses reveal finishing forage affects metabolic pathways related to beef quality and animal welfare.

Carrillo JA, He Y, Li Y, Liu J, Erdman RA, Sonstegard TS, Song J.

Sci Rep. 2016 May 17;6:25948. doi: 10.1038/srep25948.

16.

Genomic Regions Associated with Sheep Resistance to Gastrointestinal Nematodes.

Benavides MV, Sonstegard TS, Van Tassell C.

Trends Parasitol. 2016 Jun;32(6):470-480. doi: 10.1016/j.pt.2016.03.007. Epub 2016 May 13. Review.

PMID:
27183838
17.

Production of hornless dairy cattle from genome-edited cell lines.

Carlson DF, Lancto CA, Zang B, Kim ES, Walton M, Oldeschulte D, Seabury C, Sonstegard TS, Fahrenkrug SC.

Nat Biotechnol. 2016 May 6;34(5):479-81. doi: 10.1038/nbt.3560. No abstract available.

PMID:
27153274
18.

Diversity and population-genetic properties of copy number variations and multicopy genes in cattle.

Bickhart DM, Xu L, Hutchison JL, Cole JB, Null DJ, Schroeder SG, Song J, Garcia JF, Sonstegard TS, Van Tassell CP, Schnabel RD, Taylor JF, Lewin HA, Liu GE.

DNA Res. 2016 Jun;23(3):253-62. doi: 10.1093/dnares/dsw013. Epub 2016 Apr 15.

19.

Increasing the number of single nucleotide polymorphisms used in genomic evaluation of dairy cattle.

Wiggans GR, Cooper TA, VanRaden PM, Van Tassell CP, Bickhart DM, Sonstegard TS.

J Dairy Sci. 2016 Jun;99(6):4504-4511. doi: 10.3168/jds.2015-10456. Epub 2016 Mar 31.

PMID:
27040793
20.

Population-genetic properties of differentiated copy number variations in cattle.

Xu L, Hou Y, Bickhart DM, Zhou Y, Hay el HA, Song J, Sonstegard TS, Van Tassell CP, Liu GE.

Sci Rep. 2016 Mar 23;6:23161. doi: 10.1038/srep23161.

Supplemental Content

Loading ...
Support Center