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Items: 1 to 20 of 34


Parallel Selection Revealed by Population Sequencing in Chicken.

Qanbari S, Seidel M, Strom TM, Mayer KF, Preisinger R, Simianer H.

Genome Biol Evol. 2015 Nov 13;7(12):3299-306. doi: 10.1093/gbe/evv222.


A Scale-Corrected Comparison of Linkage Disequilibrium Levels between Genic and Non-Genic Regions.

Berger S, Schlather M, de los Campos G, Weigend S, Preisinger R, Erbe M, Simianer H.

PLoS One. 2015 Oct 30;10(10):e0141216. doi: 10.1371/journal.pone.0141216. eCollection 2015.


Comparison among three variant callers and assessment of the accuracy of imputation from SNP array data to whole-genome sequence level in chicken.

Ni G, Strom TM, Pausch H, Reimer C, Preisinger R, Simianer H, Erbe M.

BMC Genomics. 2015 Oct 21;16:824. doi: 10.1186/s12864-015-2059-2.


Correction: Accounting for Genetic Architecture Improves Sequence Based Genomic Prediction for a Drosophila Fitness Trait.

Ober U, Huang W, Magwire M, Schlather M, Simianer H, Mackay TF.

PLoS One. 2015 Jul 13;10(7):e0132980. doi: 10.1371/journal.pone.0132980. eCollection 2015.


Genome Scan for Selection in Structured Layer Chicken Populations Exploiting Linkage Disequilibrium Information.

Gholami M, Reimer C, Erbe M, Preisinger R, Weigend A, Weigend S, Servin B, Simianer H.

PLoS One. 2015 Jul 7;10(7):e0130497. doi: 10.1371/journal.pone.0130497. eCollection 2015.


Properties of different selection signature statistics and a new strategy for combining them.

Ma Y, Ding X, Qanbari S, Weigend S, Zhang Q, Simianer H.

Heredity (Edinb). 2015 Nov;115(5):426-36. doi: 10.1038/hdy.2015.42. Epub 2015 May 20.


Accounting for genetic architecture improves sequence based genomic prediction for a Drosophila fitness trait.

Ober U, Huang W, Magwire M, Schlather M, Simianer H, Mackay TF.

PLoS One. 2015 May 7;10(5):e0126880. doi: 10.1371/journal.pone.0126880. eCollection 2015. Erratum in: PLoS One. 2015;10(7):e0132980.


Gene-based mapping and pathway analysis of metabolic traits in dairy cows.

Ha NT, Gross JJ, van Dorland A, Tetens J, Thaller G, Schlather M, Bruckmaier R, Simianer H.

PLoS One. 2015 Mar 19;10(3):e0122325. doi: 10.1371/journal.pone.0122325. eCollection 2015.


A genome-wide association study in large white and landrace pig populations for number piglets born alive.

Bergfelder-Drüing S, Grosse-Brinkhaus C, Lind B, Erbe M, Schellander K, Simianer H, Tholen E.

PLoS One. 2015 Mar 17;10(3):e0117468. doi: 10.1371/journal.pone.0117468. eCollection 2015.


Accuracy of whole-genome prediction using a genetic architecture-enhanced variance-covariance matrix.

Zhang Z, Erbe M, He J, Ober U, Gao N, Zhang H, Simianer H, Li J.

G3 (Bethesda). 2015 Feb 9;5(4):615-27. doi: 10.1534/g3.114.016261.


Effectiveness of shrinkage and variable selection methods for the prediction of complex human traits using data from distantly related individuals.

Berger S, Pérez-Rodríguez P, Veturi Y, Simianer H, de los Campos G.

Ann Hum Genet. 2015 Mar;79(2):122-35. doi: 10.1111/ahg.12099. Epub 2015 Jan 20.


Genome properties and prospects of genomic prediction of hybrid performance in a breeding program of maize.

Technow F, Schrag TA, Schipprack W, Bauer E, Simianer H, Melchinger AE.

Genetics. 2014 Aug;197(4):1343-55. doi: 10.1534/genetics.114.165860. Epub 2014 May 21.


Population genomic analyses based on 1 million SNPs in commercial egg layers.

Gholami M, Erbe M, Gärke C, Preisinger R, Weigend A, Weigend S, Simianer H.

PLoS One. 2014 Apr 16;9(4):e94509. doi: 10.1371/journal.pone.0094509. eCollection 2014.


Improving the accuracy of whole genome prediction for complex traits using the results of genome wide association studies.

Zhang Z, Ober U, Erbe M, Zhang H, Gao N, He J, Li J, Simianer H.

PLoS One. 2014 Mar 24;9(3):e93017. doi: 10.1371/journal.pone.0093017. eCollection 2014.


Classic selective sweeps revealed by massive sequencing in cattle.

Qanbari S, Pausch H, Jansen S, Somel M, Strom TM, Fries R, Nielsen R, Simianer H.

PLoS Genet. 2014 Feb 27;10(2):e1004148. doi: 10.1371/journal.pgen.1004148. eCollection 2014 Feb.


A function accounting for training set size and marker density to model the average accuracy of genomic prediction.

Erbe M, Gredler B, Seefried FR, Bapst B, Simianer H.

PLoS One. 2013 Dec 5;8(12):e81046. doi: 10.1371/journal.pone.0081046. eCollection 2013.


An evaluation of a novel estimator of linkage disequilibrium.

Gianola D, Qanbari S, Simianer H.

Heredity (Edinb). 2013 Oct;111(4):275-85. doi: 10.1038/hdy.2013.46. Epub 2013 Aug 7.


Efficiency of genomic selection in an established commercial layer breeding program.

Sitzenstock F, Ytournel F, Sharifi AR, Cavero D, Täubert H, Preisinger R, Simianer H.

Genet Sel Evol. 2013 Jul 31;45:29. doi: 10.1186/1297-9686-45-29.


Development of a high density 600K SNP genotyping array for chicken.

Kranis A, Gheyas AA, Boschiero C, Turner F, Yu L, Smith S, Talbot R, Pirani A, Brew F, Kaiser P, Hocking PM, Fife M, Salmon N, Fulton J, Strom TM, Haberer G, Weigend S, Preisinger R, Gholami M, Qanbari S, Simianer H, Watson KA, Woolliams JA, Burt DW.

BMC Genomics. 2013 Jan 28;14:59. doi: 10.1186/1471-2164-14-59.


A high resolution genome-wide scan for significant selective sweeps: an application to pooled sequence data in laying chickens.

Qanbari S, Strom TM, Haberer G, Weigend S, Gheyas AA, Turner F, Burt DW, Preisinger R, Gianola D, Simianer H.

PLoS One. 2012;7(11):e49525. doi: 10.1371/journal.pone.0049525. Epub 2012 Nov 29.

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