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Items: 1 to 20 of 69

1.

Tissue-specific features of the X chromosome and nucleolus spatial dynamics in a malaria mosquito, Anopheles atroparvus.

Bondarenko SM, Artemov GN, Sharakhov IV, Stegniy VN.

PLoS One. 2017 Feb 3;12(2):e0171290. doi: 10.1371/journal.pone.0171290. eCollection 2017.

2.

Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes.

Prasad TS, Mohanty AK, Kumar M, Sreenivasamurthy SK, Dey G, Nirujogi RS, Pinto SM, Madugundu AK, Patil AH, Advani J, Manda SS, Gupta MK, Dwivedi SB, Kelkar DS, Hall B, Jiang X, Peery A, Rajagopalan P, Yelamanchi SD, Solanki HS, Raja R, Sathe GJ, Chavan S, Verma R, Patel KM, Jain AP, Syed N, Datta KK, Khan AA, Dammalli M, Jayaram S, Radhakrishnan A, Mitchell CJ, Na CH, Kumar N, Sinnis P, Sharakhov IV, Wang C, Gowda H, Tu Z, Kumar A, Pandey A.

Genome Res. 2017 Jan;27(1):133-144. doi: 10.1101/gr.201368.115. Epub 2016 Nov 15.

PMID:
28003436
3.

Structural divergence of chromosomes between malaria vectors Anopheles lesteri and Anopheles sinensis.

Liang J, Cheng B, Zhu G, Wei Y, Tang J, Cao J, Ma Y, Sharakhova MV, Xia A, Sharakhov IV.

Parasit Vectors. 2016 Nov 25;9(1):608.

4.

The Physical Genome Mapping of Anopheles albimanus Corrected Scaffold Misassemblies and Identified Interarm Rearrangements in Genus Anopheles.

Artemov GN, Peery AN, Jiang X, Tu Z, Stegniy VN, Sharakhova MV, Sharakhov IV.

G3 (Bethesda). 2017 Jan 5;7(1):155-164. doi: 10.1534/g3.116.034959.

5.

Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes.

Hall AB, Papathanos PA, Sharma A, Cheng C, Akbari OS, Assour L, Bergman NH, Cagnetti A, Crisanti A, Dottorini T, Fiorentini E, Galizi R, Hnath J, Jiang X, Koren S, Nolan T, Radune D, Sharakhova MV, Steele A, Timoshevskiy VA, Windbichler N, Zhang S, Hahn MW, Phillippy AM, Emrich SJ, Sharakhov IV, Tu ZJ, Besansky NJ.

Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):E2114-23. doi: 10.1073/pnas.1525164113. Epub 2016 Mar 29.

6.

Chromosome evolution in malaria mosquitoes inferred from physically mapped genome assemblies.

Sharakhov IV, Artemov GN, Sharakhova MV.

J Bioinform Comput Biol. 2016 Apr;14(2):1630003. doi: 10.1142/S0219720016300033. Epub 2016 Jan 28.

PMID:
27021248
7.

Increased production of piRNAs from euchromatic clusters and genes in Anopheles gambiae compared with Drosophila melanogaster.

George P, Jensen S, Pogorelcnik R, Lee J, Xing Y, Brasset E, Vaury C, Sharakhov IV.

Epigenetics Chromatin. 2015 Nov 27;8:50. doi: 10.1186/s13072-015-0041-5. eCollection 2015.

8.

Heterochromatin, histone modifications, and nuclear architecture in disease vectors.

Sharakhov IV, Sharakhova MV.

Curr Opin Insect Sci. 2015 Aug 1;10:110-117.

9.

Quantified effects of chromosome-nuclear envelope attachments on 3D organization of chromosomes.

Kinney NA, Onufriev AV, Sharakhov IV.

Nucleus. 2015;6(3):212-24. doi: 10.1080/19491034.2015.1056441.

10.

SEX DETERMINATION. A male-determining factor in the mosquito Aedes aegypti.

Hall AB, Basu S, Jiang X, Qi Y, Timoshevskiy VA, Biedler JK, Sharakhova MV, Elahi R, Anderson MA, Chen XG, Sharakhov IV, Adelman ZN, Tu Z.

Science. 2015 Jun 12;348(6240):1268-70. doi: 10.1126/science.aaa2850. Epub 2015 May 21.

11.

Correction: Mitotic-Chromosome-Based Physical Mapping of the Culex quinquefasciatus Genome.

Naumenko AN, Timoshevskiy VA, Kinney NA, Kokhanenko AA, deBruyn BS, Lovin DD, Stegniy VN, Severson DW, Sharakhov IV, Sharakhova MV.

PLoS One. 2015 May 8;10(5):e0127565. doi: 10.1371/journal.pone.0127565. eCollection 2015. No abstract available.

12.

A standard photomap of ovarian nurse cell chromosomes in the European malaria vector Anopheles atroparvus.

Artemov GN, Sharakhova MV, Naumenko AN, Karagodin DA, Baricheva EM, Stegniy VN, Sharakhov IV.

Med Vet Entomol. 2015 Sep;29(3):230-7. doi: 10.1111/mve.12113. Epub 2015 Mar 17.

13.

Mitotic-chromosome-based physical mapping of the Culex quinquefasciatus genome.

Naumenko AN, Timoshevskiy VA, Kinney NA, Kokhanenko AA, deBruyn BS, Lovin DD, Stegniy VN, Severson DW, Sharakhov IV, Sharakhova MV.

PLoS One. 2015 Mar 13;10(3):e0115737. doi: 10.1371/journal.pone.0115737. eCollection 2015. Erratum in: PLoS One. 2015;10(6):e0130108. PLoS One. 2015;10(5):e0127565.

14.
15.

Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.

Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ.

Science. 2015 Jan 2;347(6217):1258522. doi: 10.1126/science.1258522. Epub 2014 Nov 27.

16.

Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics.

Fontaine MC, Pease JB, Steele A, Waterhouse RM, Neafsey DE, Sharakhov IV, Jiang X, Hall AB, Catteruccia F, Kakani E, Mitchell SN, Wu YC, Smith HA, Love RR, Lawniczak MK, Slotman MA, Emrich SJ, Hahn MW, Besansky NJ.

Science. 2015 Jan 2;347(6217):1258524. doi: 10.1126/science.1258524. Epub 2014 Nov 27.

17.

Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi.

Jiang X, Peery A, Hall AB, Sharma A, Chen XG, Waterhouse RM, Komissarov A, Riehle MM, Shouche Y, Sharakhova MV, Lawson D, Pakpour N, Arensburger P, Davidson VL, Eiglmeier K, Emrich S, George P, Kennedy RC, Mane SP, Maslen G, Oringanje C, Qi Y, Settlage R, Tojo M, Tubio JM, Unger MF, Wang B, Vernick KD, Ribeiro JM, James AA, Michel K, Riehle MA, Luckhart S, Sharakhov IV, Tu Z.

Genome Biol. 2014 Sep 23;15(9):459. doi: 10.1186/s13059-014-0459-2.

18.

A standard cytogenetic map for Anopheles sinensis and chromosome arm homology between the subgenera Anopheles and Cellia.

Liang J, Sharakhova MV, Lan Q, Zhu H, Sharakhov IV, Xia A.

Med Vet Entomol. 2014 Aug;28 Suppl 1:26-32. doi: 10.1111/mve.12048.

19.

Genomic composition and evolution of Aedes aegypti chromosomes revealed by the analysis of physically mapped supercontigs.

Timoshevskiy VA, Kinney NA, deBruyn BS, Mao C, Tu Z, Severson DW, Sharakhov IV, Sharakhova MV.

BMC Biol. 2014 Apr 14;12:27. doi: 10.1186/1741-7007-12-27.

20.

Multigene phylogenetics reveals temporal diversification of major African malaria vectors.

Kamali M, Marek PE, Peery A, Antonio-Nkondjio C, Ndo C, Tu Z, Simard F, Sharakhov IV.

PLoS One. 2014 Apr 4;9(4):e93580. doi: 10.1371/journal.pone.0093580. eCollection 2014.

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