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Items: 1 to 20 of 22


ImmunoNodes - graphical development of complex immunoinformatics workflows.

Schubert B, de la Garza L, Mohr C, Walzer M, Kohlbacher O.

BMC Bioinformatics. 2017 May 8;18(1):242. doi: 10.1186/s12859-017-1667-z.


The genomic architecture of NLRP7 is Alu rich and predisposes to disease-associated large deletions.

Reddy R, Nguyen NM, Sarrabay G, Rezaei M, Rivas MC, Kavasoglu A, Berkil H, Elshafey A, Abdalla E, Nunez KP, Dreyfus H, Philippe M, Hadipour Z, Durmaz A, Eaton EE, Schubert B, Ulker V, Hadipour F, Touitou I, Fardaei M, Slim R.

Eur J Hum Genet. 2016 Oct;24(10):1516. doi: 10.1038/ejhg.2016.96. No abstract available.


FRED 2: an immunoinformatics framework for Python.

Schubert B, Walzer M, Brachvogel HP, Szolek A, Mohr C, Kohlbacher O.

Bioinformatics. 2016 Jul 1;32(13):2044-6. doi: 10.1093/bioinformatics/btw113. Epub 2016 Feb 26.


Ancient mitochondrial DNA reveals convergent evolution of giant short-faced bears (Tremarctinae) in North and South America.

Mitchell KJ, Bray SC, Bover P, Soibelzon L, Schubert BW, Prevosti F, Prieto A, Martin F, Austin JJ, Cooper A.

Biol Lett. 2016 Apr;12(4). pii: 20160062. doi: 10.1098/rsbl.2016.0062.


Designing string-of-beads vaccines with optimal spacers.

Schubert B, Kohlbacher O.

Genome Med. 2016 Jan 26;8(1):9. doi: 10.1186/s13073-016-0263-6.


EpiToolKit--a web-based workbench for vaccine design.

Schubert B, Brachvogel HP, Jürges C, Kohlbacher O.

Bioinformatics. 2015 Jul 1;31(13):2211-3. doi: 10.1093/bioinformatics/btv116. Epub 2015 Feb 20.


Chronic vagal stimulation for the treatment of low ejection fraction heart failure: results of the NEural Cardiac TherApy foR Heart Failure (NECTAR-HF) randomized controlled trial.

Zannad F, De Ferrari GM, Tuinenburg AE, Wright D, Brugada J, Butter C, Klein H, Stolen C, Meyer S, Stein KM, Ramuzat A, Schubert B, Daum D, Neuzil P, Botman C, Castel MA, D'Onofrio A, Solomon SD, Wold N, Ruble SB.

Eur Heart J. 2015 Feb 14;36(7):425-33. doi: 10.1093/eurheartj/ehu345. Epub 2014 Aug 31.


OptiType: precision HLA typing from next-generation sequencing data.

Szolek A, Schubert B, Mohr C, Sturm M, Feldhahn M, Kohlbacher O.

Bioinformatics. 2014 Dec 1;30(23):3310-6. doi: 10.1093/bioinformatics/btu548. Epub 2014 Aug 20.


Characterization of ancient DNA supports long-term survival of Haloarchaea.

Sankaranarayanan K, Lowenstein TK, Timofeeff MN, Schubert BA, Lum JK.

Astrobiology. 2014 Jul;14(7):553-60. doi: 10.1089/ast.2014.1173. Epub 2014 Jun 30.


Rationale and study design of the NEuroCardiac TherApy foR Heart Failure Study: NECTAR-HF.

De Ferrari GM, Tuinenburg AE, Ruble S, Brugada J, Klein H, Butter C, Wright DJ, Schubert B, Solomon S, Meyer S, Stein K, Ramuzat A, Zannad F.

Eur J Heart Fail. 2014 Jun;16(6):692-9. doi: 10.1002/ejhf.80. Epub 2014 May 20.


Was the giant short-faced bear a hyper-scavenger? A new approach to the dietary study of ursids using dental microwear textures.

Donohue SL, DeSantis LR, Schubert BW, Ungar PS.

PLoS One. 2013 Oct 30;8(10):e77531. doi: 10.1371/journal.pone.0077531. eCollection 2013.


Direct comparisons of 2D and 3D dental microwear proxies in extant herbivorous and carnivorous mammals.

DeSantis LR, Scott JR, Schubert BW, Donohue SL, McCray BM, Van Stolk CA, Winburn AA, Greshko MA, O'Hara MC.

PLoS One. 2013 Aug 6;8(8):e71428. doi: 10.1371/journal.pone.0071428. Print 2013.


Implications of diet for the extinction of saber-toothed cats and American lions.

Desantis LR, Schubert BW, Scott JR, Ungar PS.

PLoS One. 2012;7(12):e52453. doi: 10.1371/journal.pone.0052453. Epub 2012 Dec 26.


Adherence evaluation of endocrine treatment in breast cancer: methodological aspects.

Oberguggenberger AS, Sztankay M, Beer B, Schubert B, Meraner V, Oberacher H, Kemmler G, Giesinger J, Gamper E, Sperner-Unterweger B, Marth C, Holzner B, Hubalek M.

BMC Cancer. 2012 Oct 15;12:474. doi: 10.1186/1471-2407-12-474.


Corn content of French fry oil from national chain vs. small business restaurants.

Jahren AH, Schubert BA.

Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):2099-101. doi: 10.1073/pnas.0914437107. Epub 2010 Jan 19.


Extinction implications of a chenopod browse diet for a giant Pleistocene kangaroo.

Prideaux GJ, Ayliffe LK, DeSantis LR, Schubert BW, Murray PF, Gagan MK, Cerling TE.

Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11646-50. doi: 10.1073/pnas.0900956106. Epub 2009 Jun 25.


Sliding-induced adhesion of stiff polymer microfibre arrays. II. Microscale behaviour.

Schubert B, Lee J, Majidi C, Fearing RS.

J R Soc Interface. 2008 Aug 6;5(25):845-53. doi: 10.1098/rsif.2007.1309.


Sliding-induced adhesion of stiff polymer microfibre arrays. I. Macroscale behaviour.

Lee J, Majidi C, Schubert B, Fearing RS.

J R Soc Interface. 2008 Aug 6;5(25):835-44. doi: 10.1098/rsif.2007.1308.


The GntR-like regulator TauR activates expression of taurine utilization genes in Rhodobacter capsulatus.

Wiethaus J, Schubert B, Pfänder Y, Narberhaus F, Masepohl B.

J Bacteriol. 2008 Jan;190(2):487-93. Epub 2007 Nov 2.


Identification of two new genes involved in diazotrophic growth via the alternative Fe-only nitrogenase in the phototrophic purple bacterium Rhodobacter capsulatus.

Sicking C, Brusch M, Lindackers A, Riedel KU, Schubert B, Isakovic N, Krall C, Klipp W, Drepper T, Schneider K, Masepohl B.

J Bacteriol. 2005 Jan;187(1):92-8.

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