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Items: 1 to 20 of 27

1.

Co-registered Geochemistry and Metatranscriptomics Reveal Unexpected Distributions of Microbial Activity within a Hydrothermal Vent Field.

Olins HC, Rogers DR, Preston C, Ussler W 3rd, Pargett D, Jensen S, Roman B, Birch JM, Scholin CA, Haroon MF, Girguis PR.

Front Microbiol. 2017 Jun 13;8:1042. doi: 10.3389/fmicb.2017.01042. eCollection 2017.

2.

Recovery and identification of Pseudo-nitzschia (Bacillariophyceae) frustules from natural samples acquired using the environmental sample processor.

Bowers HA, Marin R 3rd, Birch JM, Scholin CA, Doucette GJ.

J Phycol. 2016 Feb;52(1):135-40. doi: 10.1111/jpy.12369. Epub 2016 Jan 4.

PMID:
26987095
3.

Single-taxon field measurements of bacterial gene regulation controlling DMSP fate.

Varaljay VA, Robidart J, Preston CM, Gifford SM, Durham BP, Burns AS, Ryan JP, Marin R 3rd, Kiene RP, Zehr JP, Scholin CA, Ann Moran M.

ISME J. 2015 Jul;9(7):1692. doi: 10.1038/ismej.2015.94. No abstract available.

4.

Simultaneous monitoring of faecal indicators and harmful algae using an in-situ autonomous sensor.

Yamahara KM, Demir-Hilton E, Preston CM, Marin R 3rd, Pargett D, Roman B, Jensen S, Birch JM, Boehm AB, Scholin CA.

Lett Appl Microbiol. 2015 Aug;61(2):130-8. doi: 10.1111/lam.12432. Epub 2015 May 29.

PMID:
25900660
5.

Microbial community transcriptional networks are conserved in three domains at ocean basin scales.

Aylward FO, Eppley JM, Smith JM, Chavez FP, Scholin CA, DeLong EF.

Proc Natl Acad Sci U S A. 2015 Apr 28;112(17):5443-8. doi: 10.1073/pnas.1502883112. Epub 2015 Mar 9.

6.

Single-taxon field measurements of bacterial gene regulation controlling DMSP fate.

Varaljay VA, Robidart J, Preston CM, Gifford SM, Durham BP, Burns AS, Ryan JP, Marin R 3rd, Kiene RP, Zehr JP, Scholin CA, Moran MA.

ISME J. 2015 Jul;9(7):1677-86. doi: 10.1038/ismej.2015.23. Epub 2015 Feb 20. Erratum in: ISME J. 2015 Jul;9(7):1692.

7.

Ocean microbes. Multispecies diel transcriptional oscillations in open ocean heterotrophic bacterial assemblages.

Ottesen EA, Young CR, Gifford SM, Eppley JM, Marin R 3rd, Schuster SC, Scholin CA, DeLong EF.

Science. 2014 Jul 11;345(6193):207-12. doi: 10.1126/science.1252476.

8.

The founding charter of the Genomic Observatories Network.

Davies N, Field D, Amaral-Zettler L, Clark MS, Deck J, Drummond A, Faith DP, Geller J, Gilbert J, Glöckner FO, Hirsch PR, Leong JA, Meyer C, Obst M, Planes S, Scholin C, Vogler AP, Gates RD, Toonen R, Berteaux-Lecellier V, Barbier M, Barker K, Bertilsson S, Bicak M, Bietz MJ, Bobe J, Bodrossy L, Borja A, Coddington J, Fuhrman J, Gerdts G, Gillespie R, Goodwin K, Hanson PC, Hero JM, Hoekman D, Jansson J, Jeanthon C, Kao R, Klindworth A, Knight R, Kottmann R, Koo MS, Kotoulas G, Lowe AJ, Marteinsson VT, Meyer F, Morrison N, Myrold DD, Pafilis E, Parker S, Parnell JJ, Polymenakou PN, Ratnasingham S, Roderick GK, Rodriguez-Ezpeleta N, Schonrogge K, Simon N, Valette-Silver NJ, Springer YP, Stone GN, Stones-Havas S, Sansone SA, Thibault KM, Wecker P, Wichels A, Wooley JC, Yahara T, Zingone A; GOs-COS.

Gigascience. 2014 Mar 7;3(1):2. doi: 10.1186/2047-217X-3-2.

9.

Ecogenomic sensor reveals controls on N2-fixing microorganisms in the North Pacific Ocean.

Robidart JC, Church MJ, Ryan JP, Ascani F, Wilson ST, Bombar D, Marin R 3rd, Richards KJ, Karl DM, Scholin CA, Zehr JP.

ISME J. 2014 Jun;8(6):1175-85. doi: 10.1038/ismej.2013.244. Epub 2014 Jan 30.

10.

Autonomous application of quantitative PCR in the deep sea: in situ surveys of aerobic methanotrophs using the deep-sea environmental sample processor.

Ussler W 3rd, Preston C, Tavormina P, Pargett D, Jensen S, Roman B, Marin R 3rd, Shah SR, Girguis PR, Birch JM, Orphan V, Scholin C.

Environ Sci Technol. 2013 Aug 20;47(16):9339-46. doi: 10.1021/es4023199. Epub 2013 Aug 8.

PMID:
23883184
11.

Pattern and synchrony of gene expression among sympatric marine microbial populations.

Ottesen EA, Young CR, Eppley JM, Ryan JP, Chavez FP, Scholin CA, DeLong EF.

Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E488-97. doi: 10.1073/pnas.1222099110. Epub 2013 Jan 23.

12.

Examination of microbial proteome preservation techniques applicable to autonomous environmental sample collection.

Saito MA, Bulygin VV, Moran DM, Taylor C, Scholin C.

Front Microbiol. 2011 Nov 7;2:215. doi: 10.3389/fmicb.2011.00215. eCollection 2011.

13.

Seasonal Synechococcus and Thaumarchaeal population dynamics examined with high resolution with remote in situ instrumentation.

Robidart JC, Preston CM, Paerl RW, Turk KA, Mosier AC, Francis CA, Scholin CA, Zehr JP.

ISME J. 2012 Mar;6(3):513-23. doi: 10.1038/ismej.2011.127. Epub 2011 Oct 6.

14.

Underwater application of quantitative PCR on an ocean mooring.

Preston CM, Harris A, Ryan JP, Roman B, Marin R 3rd, Jensen S, Everlove C, Birch J, Dzenitis JM, Pargett D, Adachi M, Turk K, Zehr JP, Scholin CA.

PLoS One. 2011;6(8):e22522. doi: 10.1371/journal.pone.0022522. Epub 2011 Aug 1.

15.

Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton.

Ottesen EA, Marin R 3rd, Preston CM, Young CR, Ryan JP, Scholin CA, DeLong EF.

ISME J. 2011 Dec;5(12):1881-95. doi: 10.1038/ismej.2011.70. Epub 2011 Jun 30.

16.

Near real-time, autonomous detection of marine bacterioplankton on a coastal mooring in Monterey Bay, California, using rRNA-targeted DNA probes.

Preston CM, Marin R 3rd, Jensen SD, Feldman J, Birch JM, Massion EI, Delong EF, Suzuki M, Wheeler K, Scholin CA.

Environ Microbiol. 2009 May;11(5):1168-80. doi: 10.1111/j.1462-2920.2009.01848.x. Epub 2009 Feb 5.

PMID:
19210704
17.

A robotic molecular method for in situ detection of marine invertebrate larvae.

Jones WJ, Preston CM, Marin Iii R, Scholin CA, Vrijenhoek RC.

Mol Ecol Resour. 2008 May;8(3):540-50. doi: 10.1111/j.1471-8286.2007.02021.x.

PMID:
21585831
18.

Molecular detection of marine invertebrate larvae.

Goffredi SK, Jones WJ, Scholin CA, Marin R 3rd, Vrijenhoek RC.

Mar Biotechnol (NY). 2006 Mar-Apr;8(2):149-60. Epub 2006 Jan 1.

PMID:
16380809
19.

An electrochemical RNA hybridization assay for detection of the fecal indicator bacterium Escherichia coli.

LaGier MJ, Scholin CA, Fell JW, Wang J, Goodwin KD.

Mar Pollut Bull. 2005 Nov;50(11):1251-61.

20.

Mortality of sea lions along the central California coast linked to a toxic diatom bloom.

Scholin CA, Gulland F, Doucette GJ, Benson S, Busman M, Chavez FP, Cordaro J, DeLong R, De Vogelaere A, Harvey J, Haulena M, Lefebvre K, Lipscomb T, Loscutoff S, Lowenstine LJ, Marin R 3rd, Miller PE, McLellan WA, Moeller PD, Powell CL, Rowles T, Silvagni P, Silver M, Spraker T, Trainer V, Van Dolah FM.

Nature. 2000 Jan 6;403(6765):80-4.

PMID:
10638756

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