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Items: 18

1.

Genetic engineering in Actinoplanes sp. SE50/110 - development of an intergeneric conjugation system for the introduction of actinophage-based integrative vectors.

Gren T, Ortseifen V, Wibberg D, Schneiker-Bekel S, Bednarz H, Niehaus K, Zemke T, Persicke M, Pühler A, Kalinowski J.

J Biotechnol. 2016 Aug 20;232:79-88. doi: 10.1016/j.jbiotec.2016.05.012. Epub 2016 May 12.

PMID:
27181842
2.

Comparative proteome analysis of Actinoplanes sp. SE50/110 grown with maltose or glucose shows minor differences for acarbose biosynthesis proteins but major differences for saccharide transporters.

Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Wolf T, Zemke T, Wehmeier UF, Hecker M, Kalinowski J, Becher D, Pühler A.

J Proteomics. 2016 Jan 10;131:140-8. doi: 10.1016/j.jprot.2015.10.023. Epub 2015 Oct 25.

PMID:
26597626
3.

Comprehensive proteome analysis of Actinoplanes sp. SE50/110 highlighting the location of proteins encoded by the acarbose and the pyochelin biosynthesis gene cluster.

Wendler S, Otto A, Ortseifen V, Bonn F, Neshat A, Schneiker-Bekel S, Walter F, Wolf T, Zemke T, Wehmeier UF, Hecker M, Kalinowski J, Becher D, Pühler A.

J Proteomics. 2015 Jul 1;125:1-16. doi: 10.1016/j.jprot.2015.04.013. Epub 2015 Apr 18.

PMID:
25896738
4.

The Sinorhizobium fredii HH103 Genome: A Comparative Analysis With S. fredii Strains Differing in Their Symbiotic Behavior With Soybean.

Vinardell JM, Acosta-Jurado S, Zehner S, Göttfert M, Becker A, Baena I, Blom J, Crespo-Rivas JC, Goesmann A, Jaenicke S, Krol E, McIntosh M, Margaret I, Pérez-Montaño F, Schneiker-Bekel S, Serranía J, Szczepanowski R, Buendía AM, Lloret J, Bonilla I, Pühler A, Ruiz-Sainz JE, Weidner S.

Mol Plant Microbe Interact. 2015 Jul;28(7):811-24. doi: 10.1094/MPMI-12-14-0397-FI. Epub 2015 Jun 15.

5.

Carbon source dependent biosynthesis of acarviose metabolites in Actinoplanes sp. SE50/110.

Wendler S, Ortseifen V, Persicke M, Klein A, Neshat A, Niehaus K, Schneiker-Bekel S, Walter F, Wehmeier UF, Kalinowski J, Pühler A.

J Biotechnol. 2014 Dec 10;191:113-20. doi: 10.1016/j.jbiotec.2014.08.019. Epub 2014 Aug 26.

PMID:
25169663
6.

Improving the genome annotation of the acarbose producer Actinoplanes sp. SE50/110 by sequencing enriched 5'-ends of primary transcripts.

Schwientek P, Neshat A, Kalinowski J, Klein A, Rückert C, Schneiker-Bekel S, Wendler S, Stoye J, Pühler A.

J Biotechnol. 2014 Nov 20;190:85-95. doi: 10.1016/j.jbiotec.2014.03.013. Epub 2014 Mar 15.

PMID:
24642337
7.

Genome Sequence of Sinorhizobium meliloti Rm41.

Weidner S, Baumgarth B, Göttfert M, Jaenicke S, Pühler A, Schneiker-Bekel S, Serrania J, Szczepanowski R, Becker A.

Genome Announc. 2013 Jan;1(1). pii: e00013-12. doi: 10.1128/genomeA.00013-12. Epub 2013 Jan 15.

8.

Genome sequence of a Neisseria meningitidis capsule null locus strain from the clonal complex of sequence type 198.

Schork S, Schlüter A, Blom J, Schneiker-Bekel S, Pühler A, Goesmann A, Frosch M, Schoen C.

J Bacteriol. 2012 Sep;194(18):5144-5. doi: 10.1128/JB.01099-12.

9.

IncP-1β plasmids of Comamonas sp. and Delftia sp. strains isolated from a wastewater treatment plant mediate resistance to and decolorization of the triphenylmethane dye crystal violet.

Stolze Y, Eikmeyer F, Wibberg D, Brandis G, Karsten C, Krahn I, Schneiker-Bekel S, Viehöver P, Barsch A, Keck M, Top EM, Niehaus K, Schlüter A.

Microbiology. 2012 Aug;158(Pt 8):2060-72. doi: 10.1099/mic.0.059220-0. Epub 2012 May 31.

PMID:
22653947
10.

Genome sequence of the soybean symbiont Sinorhizobium fredii HH103.

Weidner S, Becker A, Bonilla I, Jaenicke S, Lloret J, Margaret I, Pühler A, Ruiz-Sainz JE, Schneiker-Bekel S, Szczepanowski R, Vinardell JM, Zehner S, Göttfert M.

J Bacteriol. 2012 Mar;194(6):1617-8. doi: 10.1128/JB.06729-11.

11.

The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution.

Eikmeyer F, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CJ, Top EM, Pühler A, Schlüter A.

Plasmid. 2012 Jul;68(1):13-24. doi: 10.1016/j.plasmid.2012.01.011. Epub 2012 Feb 2.

PMID:
22326849
12.

The complete genome sequence of the dominant Sinorhizobium meliloti field isolate SM11 extends the S. meliloti pan-genome.

Schneiker-Bekel S, Wibberg D, Bekel T, Blom J, Linke B, Neuweger H, Stiens M, Vorhölter FJ, Weidner S, Goesmann A, Pühler A, Schlüter A.

J Biotechnol. 2011 Aug 20;155(1):20-33. doi: 10.1016/j.jbiotec.2010.12.018. Epub 2011 Mar 17.

PMID:
21396969
13.

Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid.

Wibberg D, Blom J, Jaenicke S, Kollin F, Rupp O, Scharf B, Schneiker-Bekel S, Sczcepanowski R, Goesmann A, Setubal JC, Schmitt R, Pühler A, Schlüter A.

J Biotechnol. 2011 Aug 20;155(1):50-62. doi: 10.1016/j.jbiotec.2011.01.010. Epub 2011 Feb 15.

PMID:
21329740
14.

Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulence.

Joseph B, Schneiker-Bekel S, Schramm-Glück A, Blom J, Claus H, Linke B, Schwarz RF, Becker A, Goesmann A, Frosch M, Schoen C.

J Bacteriol. 2010 Oct;192(20):5363-77. doi: 10.1128/JB.00883-10. Epub 2010 Aug 13.

15.

Complete genome sequence and lifestyle of black-pigmented Corynebacterium aurimucosum ATCC 700975 (formerly C. nigricans CN-1) isolated from a vaginal swab of a woman with spontaneous abortion.

Trost E, Götker S, Schneider J, Schneiker-Bekel S, Szczepanowski R, Tilker A, Viehoever P, Arnold W, Bekel T, Blom J, Gartemann KH, Linke B, Goesmann A, Pühler A, Shukla SK, Tauch A.

BMC Genomics. 2010 Feb 5;11:91. doi: 10.1186/1471-2164-11-91.

16.

The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae.

Gross R, Guzman CA, Sebaihia M, dos Santos VA, Pieper DH, Koebnik R, Lechner M, Bartels D, Buhrmester J, Choudhuri JV, Ebensen T, Gaigalat L, Herrmann S, Khachane AN, Larisch C, Link S, Linke B, Meyer F, Mormann S, Nakunst D, Rückert C, Schneiker-Bekel S, Schulze K, Vorhölter FJ, Yevsa T, Engle JT, Goldman WE, Pühler A, Göbel UB, Goesmann A, Blöcker H, Kaiser O, Martinez-Arias R.

BMC Genomics. 2008 Sep 30;9:449. doi: 10.1186/1471-2164-9-449.

17.

Bacteriophage 2851 is a prototype phage for dissemination of the Shiga toxin variant gene 2c in Escherichia coli O157:H7.

Strauch E, Hammerl JA, Konietzny A, Schneiker-Bekel S, Arnold W, Goesmann A, Pühler A, Beutin L.

Infect Immun. 2008 Dec;76(12):5466-77. doi: 10.1128/IAI.00875-08. Epub 2008 Sep 29.

18.

Comparative genomic hybridisation and ultrafast pyrosequencing revealed remarkable differences between the Sinorhizobium meliloti genomes of the model strain Rm1021 and the field isolate SM11.

Stiens M, Becker A, Bekel T, Gödde V, Goesmann A, Niehaus K, Schneiker-Bekel S, Selbitschka W, Weidner S, Schlüter A, Pühler A.

J Biotechnol. 2008 Aug 31;136(1-2):31-7. doi: 10.1016/j.jbiotec.2008.04.014. Epub 2008 May 9.

PMID:
18562031

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