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Items: 1 to 20 of 53


v3NLP Framework: Tools to Build Applications for Extracting Concepts from Clinical Text.

Divita G, Carter ME, Tran LT, Redd D, Zeng QT, Duvall S, Samore MH, Gundlapalli AV.

EGEMS (Wash DC). 2016 Aug 11;4(3):1228. doi: 10.13063/2327-9214.1228. eCollection 2016.


Taking an Antibiotic Time-out: Utilization and Usability of a Self-Stewardship Time-out Program for Renewal of Vancomycin and Piperacillin-Tazobactam.

Graber CJ, Jones MM, Glassman PA, Weir C, Butler J, Nechodom K, Kay CL, Furman AE, Tran TT, Foltz C, Pollack LA, Samore MH, Goetz MB.

Hosp Pharm. 2015 Nov;50(11):1011-24. doi: 10.1310/hpj5011-1011. Epub 2015 Nov 24.


Implementing an Antibiotic Stewardship Program: Guidelines by the Infectious Diseases Society of America and the Society for Healthcare Epidemiology of America.

Barlam TF, Cosgrove SE, Abbo LM, MacDougall C, Schuetz AN, Septimus EJ, Srinivasan A, Dellit TH, Falck-Ytter YT, Fishman NO, Hamilton CW, Jenkins TC, Lipsett PA, Malani PN, May LS, Moran GJ, Neuhauser MM, Newland JG, Ohl CA, Samore MH, Seo SK, Trivedi KK.

Clin Infect Dis. 2016 May 15;62(10):e51-77. doi: 10.1093/cid/ciw118. Epub 2016 Apr 13.


An Economic Analysis of Strategies to Control Clostridium Difficile Transmission and Infection Using an Agent-Based Simulation Model.

Nelson RE, Jones M, Leecaster M, Samore MH, Ray W, Huttner A, Huttner B, Khader K, Stevens VW, Gerding D, Schweizer ML, Rubin MA.

PLoS One. 2016 Mar 31;11(3):e0152248. doi: 10.1371/journal.pone.0152248. eCollection 2016.


Understanding complex clinical reasoning in infectious diseases for improving clinical decision support design.

Islam R, Weir CR, Jones M, Del Fiol G, Samore MH.

BMC Med Inform Decis Mak. 2015 Nov 30;15:101. doi: 10.1186/s12911-015-0221-z.


Exploiting the UMLS Metathesaurus for extracting and categorizing concepts representing signs and symptoms to anatomically related organ systems.

Tran LT, Divita G, Carter ME, Judd J, Samore MH, Gundlapalli AV.

J Biomed Inform. 2015 Dec;58:19-27. doi: 10.1016/j.jbi.2015.08.024. Epub 2015 Sep 8.


Estimates of Outbreak Risk from New Introductions of Ebola with Immediate and Delayed Transmission Control.

Toth DJ, Gundlapalli AV, Khader K, Pettey WB, Rubin MA, Adler FR, Samore MH.

Emerg Infect Dis. 2015 Aug;21(8):1402-8. doi: 10.3201/eid2108.150170.


The Suspected Infected Prosthetic Joint: Clinical Acumen and Added Value of Laboratory Investigations.

Petti CA, Stoddard GJ, Sande MA, Samore MH, Simmon KE, Hofmann A.

PLoS One. 2015 Jul 16;10(7):e0131609. doi: 10.1371/journal.pone.0131609. eCollection 2015.


Identifying Homelessness among Veterans Using VA Administrative Data: Opportunities to Expand Detection Criteria.

Peterson R, Gundlapalli AV, Metraux S, Carter ME, Palmer M, Redd A, Samore MH, Fargo JD.

PLoS One. 2015 Jul 14;10(7):e0132664. doi: 10.1371/journal.pone.0132664. eCollection 2015.


Readmission destination and risk of mortality after major surgery: an observational cohort study.

Brooke BS, Goodney PP, Kraiss LW, Gottlieb DJ, Samore MH, Finlayson SR.

Lancet. 2015 Aug 29;386(9996):884-95. doi: 10.1016/S0140-6736(15)60087-3. Epub 2015 Jun 17.


The role of heterogeneity in contact timing and duration in network models of influenza spread in schools.

Toth DJ, Leecaster M, Pettey WB, Gundlapalli AV, Gao H, Rainey JJ, Uzicanin A, Samore MH.

J R Soc Interface. 2015 Jul 6;12(108):20150279. doi: 10.1098/rsif.2015.0279.


Does universal active MRSA surveillance influence anti-MRSA antibiotic use? A retrospective analysis of the treatment of patients admitted with suspicion of infection at Veterans Affairs Medical Centers between 2005 and 2010.

Jones M, Huttner B, Leecaster M, Huttner A, Damal K, Tanner W, Nielson C, Rubin MA, Goetz MB, Madaras-Kelly K, Samore MH.

J Antimicrob Chemother. 2014 Dec;69(12):3401-8. doi: 10.1093/jac/dku299. Epub 2014 Aug 6.


Infection control interventions in small rural hospitals with limited resources: results of a cluster-randomized feasibility trial.

Stevenson KB, Searle K, Curry G, Boyce JM, Harbarth S, Stoddard GJ, Samore MH.

Antimicrob Resist Infect Control. 2014 Mar 28;3(1):10. doi: 10.1186/2047-2994-3-10.


Sophia: A Expedient UMLS Concept Extraction Annotator.

Divita G, Zeng QT, Gundlapalli AV, Duvall S, Nebeker J, Samore MH.

AMIA Annu Symp Proc. 2014 Nov 14;2014:467-76. eCollection 2014.


A simulation-based assessment of strategies to control Clostridium difficile transmission and infection.

Rubin MA, Jones M, Leecaster M, Khader K, Ray W, Huttner A, Huttner B, Toth D, Sablay T, Borotkanics RJ, Gerding DN, Samore MH.

PLoS One. 2013 Nov 21;8(11):e80671. doi: 10.1371/journal.pone.0080671. eCollection 2013.


Validating a strategy for psychosocial phenotyping using a large corpus of clinical text.

Gundlapalli AV, Redd A, Carter M, Divita G, Shen S, Palmer M, Samore MH.

J Am Med Inform Assoc. 2013 Dec;20(e2):e355-64. doi: 10.1136/amiajnl-2013-001946. Epub 2013 Oct 29.


Quantitative models of the dose-response and time course of inhalational anthrax in humans.

Toth DJ, Gundlapalli AV, Schell WA, Bulmahn K, Walton TE, Woods CW, Coghill C, Gallegos F, Samore MH, Adler FR.

PLoS Pathog. 2013 Aug;9(8):e1003555. doi: 10.1371/journal.ppat.1003555. Epub 2013 Aug 15.


Generalizability and comparison of automatic clinical text de-identification methods and resources.

Ferrández Ó, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM.

AMIA Annu Symp Proc. 2012;2012:199-208. Epub 2012 Nov 3.


BoB, a best-of-breed automated text de-identification system for VHA clinical documents.

Ferrández O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM.

J Am Med Inform Assoc. 2013 Jan 1;20(1):77-83. doi: 10.1136/amiajnl-2012-001020. Epub 2012 Sep 4.


Evaluating current automatic de-identification methods with Veteran's health administration clinical documents.

Ferrández O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM.

BMC Med Res Methodol. 2012 Jul 27;12:109.

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