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Items: 1 to 20 of 55

1.

Reconciling the evolutionary origin of bread wheat (Triticum aestivum).

El Baidouri M, Murat F, Veyssiere M, Molinier M, Flores R, Burlot L, Alaux M, Quesneville H, Pont C, Salse J.

New Phytol. 2016 Aug 23. doi: 10.1111/nph.14113. [Epub ahead of print]

PMID:
27551821
2.
3.

Erratum to: Understanding Brassicaceae evolution through ancestral genome reconstruction.

Murat F, Louis A, Maumus F, Armero A, Cook R, Quesneville H, Roest Crollius H, Salse J.

Genome Biol. 2016 Apr 4;17:64. doi: 10.1186/s13059-016-0887-2. No abstract available.

4.

Ancestors of modern plant crops.

Salse J.

Curr Opin Plant Biol. 2016 Apr;30:134-42. doi: 10.1016/j.pbi.2016.02.005. Review.

PMID:
26985732
5.

Understanding Brassicaceae evolution through ancestral genome reconstruction.

Murat F, Louis A, Maumus F, Armero A, Cooke R, Quesneville H, Roest Crollius H, Salse J.

Genome Biol. 2015 Dec 10;16:262. doi: 10.1186/s13059-015-0814-y. Erratum in: Genome Biol. 2016;17(1):64.

6.

Evidence of intense chromosomal shuffling during conifer evolution.

de Miguel M, Bartholomé J, Ehrenmann F, Murat F, Moriguchi Y, Uchiyama K, Ueno S, Tsumura Y, Lagraulet H, de Maria N, Cabezas JA, Cervera MT, Gion JM, Salse J, Plomion C.

Genome Biol Evol. 2015 Sep 23. pii: evv185. [Epub ahead of print]

7.

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Plomion C, Aury JM, Amselem J, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Boudet N, Boury C, Canaguier A, Couloux A, Da Silva C, Duplessis S, Ehrenmann F, Estrada-Mairey B, Fouteau S, Francillonne N, Gaspin C, Guichard C, Klopp C, Labadie K, Lalanne C, Le Clainche I, Leplé JC, Le Provost G, Leroy T, Lesur I, Martin F, Mercier J, Michotey C, Murat F, Salin F, Steinbach D, Faivre-Rampant P, Wincker P, Salse J, Quesneville H, Kremer A.

Mol Ecol Resour. 2016 Jan;16(1):254-65. doi: 10.1111/1755-0998.12425.

PMID:
25944057
8.

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release.

Lesur I, Le Provost G, Bento P, Da Silva C, Leplé JC, Murat F, Ueno S, Bartholomé J, Lalanne C, Ehrenmann F, Noirot C, Burban C, Léger V, Amselem J, Belser C, Quesneville H, Stierschneider M, Fluch S, Feldhahn L, Tarkka M, Herrmann S, Buscot F, Klopp C, Kremer A, Salse J, Aury JM, Plomion C.

BMC Genomics. 2015 Feb 21;16:112. doi: 10.1186/s12864-015-1331-9.

9.

Karyotype and gene order evolution from reconstructed extinct ancestors highlight contrasts in genome plasticity of modern rosid crops.

Murat F, Zhang R, Guizard S, Gavranović H, Flores R, Steinbach D, Quesneville H, Tannier E, Salse J.

Genome Biol Evol. 2015 Jan 29;7(3):735-49. doi: 10.1093/gbe/evv014.

10.

GenomicusPlants: a web resource to study genome evolution in flowering plants.

Louis A, Murat F, Salse J, Crollius HR.

Plant Cell Physiol. 2015 Jan;56(1):e4. doi: 10.1093/pcp/pcu177.

11.

FRIZZY PANICLE drives supernumerary spikelets in bread wheat.

Dobrovolskaya O, Pont C, Sibout R, Martinek P, Badaeva E, Murat F, Chosson A, Watanabe N, Prat E, Gautier N, Gautier V, Poncet C, Orlov YL, Krasnikov AA, Bergès H, Salina E, Laikova L, Salse J.

Plant Physiol. 2015 Jan;167(1):189-99. doi: 10.1104/pp.114.250043.

12.

A perspective from drug user organisations on 'ECDC and EMCDDA guidance: prevention and control of infectious diseases among people who inject drugs'.

Corbacho A, Rivera M, Trujillo F, Martí M, Carbonell J, Fernández F, Rosselló A, Perramon J, Salse J, Ramos I.

BMC Infect Dis. 2014;14 Suppl 6:S10. doi: 10.1186/1471-2334-14-S6-S10. No abstract available.

13.

The genome of Eucalyptus grandis.

Myburg AA, Grattapaglia D, Tuskan GA, Hellsten U, Hayes RD, Grimwood J, Jenkins J, Lindquist E, Tice H, Bauer D, Goodstein DM, Dubchak I, Poliakov A, Mizrachi E, Kullan AR, Hussey SG, Pinard D, van der Merwe K, Singh P, van Jaarsveld I, Silva-Junior OB, Togawa RC, Pappas MR, Faria DA, Sansaloni CP, Petroli CD, Yang X, Ranjan P, Tschaplinski TJ, Ye CY, Li T, Sterck L, Vanneste K, Murat F, Soler M, Clemente HS, Saidi N, Cassan-Wang H, Dunand C, Hefer CA, Bornberg-Bauer E, Kersting AR, Vining K, Amarasinghe V, Ranik M, Naithani S, Elser J, Boyd AE, Liston A, Spatafora JW, Dharmwardhana P, Raja R, Sullivan C, Romanel E, Alves-Ferreira M, Külheim C, Foley W, Carocha V, Paiva J, Kudrna D, Brommonschenkel SH, Pasquali G, Byrne M, Rigault P, Tibbits J, Spokevicius A, Jones RC, Steane DA, Vaillancourt RE, Potts BM, Joubert F, Barry K, Pappas GJ, Strauss SH, Jaiswal P, Grima-Pettenati J, Salse J, Van de Peer Y, Rokhsar DS, Schmutz J.

Nature. 2014 Jun 19;510(7505):356-62. doi: 10.1038/nature13308.

PMID:
24919147
14.

Genetic and molecular bases of yield-associated traits: a translational biology approach between rice and wheat.

Valluru R, Reynolds MP, Salse J.

Theor Appl Genet. 2014 Jul;127(7):1463-89. doi: 10.1007/s00122-014-2332-9. Review.

PMID:
24913362
15.

Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication.

Wu GA, Prochnik S, Jenkins J, Salse J, Hellsten U, Murat F, Perrier X, Ruiz M, Scalabrin S, Terol J, Takita MA, Labadie K, Poulain J, Couloux A, Jabbari K, Cattonaro F, Del Fabbro C, Pinosio S, Zuccolo A, Chapman J, Grimwood J, Tadeo FR, Estornell LH, Muñoz-Sanz JV, Ibanez V, Herrero-Ortega A, Aleza P, Pérez-Pérez J, Ramón D, Brunel D, Luro F, Chen C, Farmerie WG, Desany B, Kodira C, Mohiuddin M, Harkins T, Fredrikson K, Burns P, Lomsadze A, Borodovsky M, Reforgiato G, Freitas-Astúa J, Quetier F, Navarro L, Roose M, Wincker P, Schmutz J, Morgante M, Machado MA, Talon M, Jaillon O, Ollitrault P, Gmitter F, Rokhsar D.

Nat Biotechnol. 2014 Jul;32(7):656-62. doi: 10.1038/nbt.2906.

16.

Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array.

Wang S, Wong D, Forrest K, Allen A, Chao S, Huang BE, Maccaferri M, Salvi S, Milner SG, Cattivelli L, Mastrangelo AM, Whan A, Stephen S, Barker G, Wieseke R, Plieske J; International Wheat Genome Sequencing Consortium., Lillemo M, Mather D, Appels R, Dolferus R, Brown-Guedira G, Korol A, Akhunova AR, Feuillet C, Salse J, Morgante M, Pozniak C, Luo MC, Dvorak J, Morell M, Dubcovsky J, Ganal M, Tuberosa R, Lawley C, Mikoulitch I, Cavanagh C, Edwards KJ, Hayden M, Akhunov E.

Plant Biotechnol J. 2014 Aug;12(6):787-96. doi: 10.1111/pbi.12183.

17.

Paleo-evolutionary plasticity of plant disease resistance genes.

Zhang R, Murat F, Pont C, Langin T, Salse J.

BMC Genomics. 2014 Mar 12;15:187. doi: 10.1186/1471-2164-15-187.

18.

Shared subgenome dominance following polyploidization explains grass genome evolutionary plasticity from a seven protochromosome ancestor with 16K protogenes.

Murat F, Zhang R, Guizard S, Flores R, Armero A, Pont C, Steinbach D, Quesneville H, Cooke R, Salse J.

Genome Biol Evol. 2014 Jan;6(1):12-33. doi: 10.1093/gbe/evt200.

19.

Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo- and neoduplicated subgenomes.

Pont C, Murat F, Guizard S, Flores R, Foucrier S, Bidet Y, Quraishi UM, Alaux M, Doležel J, Fahima T, Budak H, Keller B, Salvi S, Maccaferri M, Steinbach D, Feuillet C, Quesneville H, Salse J.

Plant J. 2013 Dec;76(6):1030-44. doi: 10.1111/tpj.12366.

20.

The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions.

Guo S, Zhang J, Sun H, Salse J, Lucas WJ, Zhang H, Zheng Y, Mao L, Ren Y, Wang Z, Min J, Guo X, Murat F, Ham BK, Zhang Z, Gao S, Huang M, Xu Y, Zhong S, Bombarely A, Mueller LA, Zhao H, He H, Zhang Y, Zhang Z, Huang S, Tan T, Pang E, Lin K, Hu Q, Kuang H, Ni P, Wang B, Liu J, Kou Q, Hou W, Zou X, Jiang J, Gong G, Klee K, Schoof H, Huang Y, Hu X, Dong S, Liang D, Wang J, Wu K, Xia Y, Zhao X, Zheng Z, Xing M, Liang X, Huang B, Lv T, Wang J, Yin Y, Yi H, Li R, Wu M, Levi A, Zhang X, Giovannoni JJ, Wang J, Li Y, Fei Z, Xu Y.

Nat Genet. 2013 Jan;45(1):51-8. doi: 10.1038/ng.2470.

PMID:
23179023
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