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Items: 1 to 20 of 48

1.

Freshwater Viromes: From Sampling to Evaluation.

Putonti C, Diener Z, Watkins SC.

Methods Mol Biol. 2018;1849:17-27. doi: 10.1007/978-1-4939-8728-3_2.

PMID:
30298245
2.

S-plot2: Rapid Visual and Statistical Analysis of Genomic Sequences.

Kalesinskas L, Cudone E, Fofanov Y, Putonti C.

Evol Bioinform Online. 2018 Sep 17;14:1176934318797354. doi: 10.1177/1176934318797354. eCollection 2018.

3.

Pseudomonas PB1-Like Phages: Whole Genomes from Metagenomes Offer Insight into an Abundant Group of Bacteriophages.

Watkins SC, Sible E, Putonti C.

Viruses. 2018 Jun 16;10(6). pii: E331. doi: 10.3390/v10060331.

4.

Detecting viral genomes in the female urinary microbiome.

Garretto A, Thomas-White K, Wolfe AJ, Putonti C.

J Gen Virol. 2018 Aug;99(8):1141-1146. doi: 10.1099/jgv.0.001097. Epub 2018 Jun 11.

PMID:
29889019
5.

The Evolution of Molecular Compatibility between Bacteriophage ΦX174 and its Host.

Kula A, Saelens J, Cox J, Schubert AM, Travisano M, Putonti C.

Sci Rep. 2018 May 29;8(1):8350. doi: 10.1038/s41598-018-25914-7.

6.

Culturing of female bladder bacteria reveals an interconnected urogenital microbiota.

Thomas-White K, Forster SC, Kumar N, Van Kuiken M, Putonti C, Stares MD, Hilt EE, Price TK, Wolfe AJ, Lawley TD.

Nat Commun. 2018 Apr 19;9(1):1557. doi: 10.1038/s41467-018-03968-5.

7.

Gene Co-occurrence Networks Reflect Bacteriophage Ecology and Evolution.

Shapiro JW, Putonti C.

MBio. 2018 Mar 20;9(2). pii: e01870-17. doi: 10.1128/mBio.01870-17.

8.

Draft Genome Sequence of the Siderophore-Degrading Soil Bacterium Mesorhizobium loti Strain LU.

Castignetti D, Polley N, Putonti C.

Genome Announc. 2018 Feb 8;6(6). pii: e00029-18. doi: 10.1128/genomeA.00029-18.

9.

Draft Genome Sequence of an Active Heterotrophic Nitrifier-Denitrifier, Cupriavidus pauculus UM1.

Putonti C, Polley N, Castignetti D.

Genome Announc. 2018 Feb 8;6(6). pii: e00028-18. doi: 10.1128/genomeA.00028-18.

10.

Bacteriophages of the Urinary Microbiome.

Miller-Ensminger T, Garretto A, Brenner J, Thomas-White K, Zambom A, Wolfe AJ, Putonti C.

J Bacteriol. 2018 Mar 12;200(7). pii: e00738-17. doi: 10.1128/JB.00738-17. Print 2018 Apr 1.

11.

Draft Genome Sequence of Staphylococcus epidermidis (Winslow and Winslow) Evans (ATCC 14990).

Putonti C, Kalesinskas L, Cudone E, Engelbrecht KC, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00619-17. doi: 10.1128/genomeA.00619-17.

12.

Draft Genome Sequences of Two ATCC Staphylococcus aureus subsp. aureus Strains.

Putonti C, Kalesinskas L, Cudone E, Engelbrecht KC, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00618-17. doi: 10.1128/genomeA.00618-17.

13.

Draft Genome Sequence of Micrococcus luteus (Schroeter) Cohn (ATCC 12698).

Putonti C, Cudone E, Kalesinskas L, Engelbrecht KC, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00576-17. doi: 10.1128/genomeA.00576-17.

14.

Draft Genome Sequence of Enterococcus faecalis ATCC BAA-2128.

Putonti C, Kalesinskas L, Cudone E, Engelbrecht KC, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00575-17. doi: 10.1128/genomeA.00575-17.

15.

Draft Genome Sequence of Escherichia coli K-12 (ATCC 29425).

Engelbrecht KC, Putonti C, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00574-17. doi: 10.1128/genomeA.00574-17.

16.

Draft Genome Sequence of Escherichia coli K-12 (ATCC 10798).

Dimitrova D, Engelbrecht KC, Putonti C, Koenig DW, Wolfe AJ.

Genome Announc. 2017 Jul 6;5(27). pii: e00573-17. doi: 10.1128/genomeA.00573-17.

17.

The use of informativity in the development of robust viromics-based examinations.

Watkins SC, Putonti C.

PeerJ. 2017 May 2;5:e3281. doi: 10.7717/peerj.3281. eCollection 2017.

18.

PhagePhisher: a pipeline for the discovery of covert viral sequences in complex genomic datasets.

Hatzopoulos T, Watkins SC, Putonti C.

Microb Genom. 2016 Mar 10;2(3):e000053. doi: 10.1099/mgen.0.000053. eCollection 2016 Mar.

19.

Draft Genome Sequence of a Urinary Isolate of Lactobacillus crispatus.

Price TK, Shaheen M, Kalesinskas L, Malki K, Hilt EE, Putonti C, Wolfe AJ.

Genome Announc. 2016 Dec 1;4(6). pii: e01278-16. doi: 10.1128/genomeA.01278-16.

20.

Seven Bacteriophages Isolated from the Female Urinary Microbiota.

Malki K, Sible E, Cooper A, Garretto A, Bruder K, Watkins SC, Putonti C.

Genome Announc. 2016 Nov 23;4(6). pii: e01003-16. doi: 10.1128/genomeA.01003-16.

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