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Items: 1 to 20 of 34

1.

Accurate predictions of postmortem interval using linear regression analyses of gene meter expression data.

Hunter MC, Pozhitkov AE, Noble PA.

Forensic Sci Int. 2017 Mar 4;275:90-101. doi: 10.1016/j.forsciint.2017.02.027. [Epub ahead of print]

PMID:
28329724
2.

Tracing the dynamics of gene transcripts after organismal death.

Pozhitkov AE, Neme R, Domazet-LoŇ°o T, Leroux BG, Soni S, Tautz D, Noble PA.

Open Biol. 2017 Jan;7(1). pii: 160267. doi: 10.1098/rsob.160267.

3.

Datasets used to discover the microbial signatures of oral dysbiosis, periodontitis and edentulism in humans.

Colby Hunter M, Pozhitkov AE, Noble PA.

Data Brief. 2016 Nov 19;10:30-32. eCollection 2017 Feb.

4.

Increased Levels of Dissolved Titanium are Associated With Peri-Implantitis - A Case-Control Study.

Safioti LM, Kotsakis GA, Pozhitkov AE, Chung WO, Daubert DM.

J Periodontol. 2016 Nov 18:1-12. [Epub ahead of print]

PMID:
27858551
5.

Microbial signatures of oral dysbiosis, periodontitis and edentulism revealed by Gene Meter methodology.

Hunter MC, Pozhitkov AE, Noble PA.

J Microbiol Methods. 2016 Dec;131:85-101. doi: 10.1016/j.mimet.2016.09.019. Epub 2016 Oct 4.

PMID:
27717873
6.

Towards microbiome transplant as a therapy for periodontitis: an exploratory study of periodontitis microbial signature contrasted by oral health, caries and edentulism.

Pozhitkov AE, Leroux BG, Randolph TW, Beikler T, Flemmig TF, Noble PA.

BMC Oral Health. 2015 Oct 14;15:125. doi: 10.1186/s12903-015-0109-4.

7.

Interruption of Electrical Conductivity of Titanium Dental Implants Suggests a Path Towards Elimination Of Corrosion.

Pozhitkov AE, Daubert D, Brochwicz Donimirski A, Goodgion D, Vagin MY, Leroux BG, Hunter CM, Flemmig TF, Noble PA, Bryers JD.

PLoS One. 2015 Oct 13;10(10):e0140393. doi: 10.1371/journal.pone.0140393. eCollection 2015.

8.

Identification of genes involved in taura syndrome virus resistance in litopenaeus vannamei.

Boube I, Lotz JM, Pozhitkov AE, Li S, Griffitt RJ.

J Aquat Anim Health. 2014 Sep;26(3):137-43. doi: 10.1080/08997659.2013.860058.

PMID:
25229483
9.

Distinctive thanatomicrobiome signatures found in the blood and internal organs of humans.

Can I, Javan GT, Pozhitkov AE, Noble PA.

J Microbiol Methods. 2014 Nov;106:1-7. doi: 10.1016/j.mimet.2014.07.026. Epub 2014 Aug 1.

PMID:
25091187
10.

A revised design for microarray experiments to account for experimental noise and uncertainty of probe response.

Pozhitkov AE, Noble PA, Bryk J, Tautz D.

PLoS One. 2014 Mar 11;9(3):e91295. doi: 10.1371/journal.pone.0091295. eCollection 2014.

11.

Physico-chemical foundations underpinning microarray and next-generation sequencing experiments.

Harrison A, Binder H, Buhot A, Burden CJ, Carlon E, Gibas C, Gamble LJ, Halperin A, Hooyberghs J, Kreil DP, Levicky R, Noble PA, Ott A, Pettitt BM, Tautz D, Pozhitkov AE.

Nucleic Acids Res. 2013 Mar 1;41(5):2779-96. doi: 10.1093/nar/gks1358. Epub 2013 Jan 9. Review.

12.

Transcriptome changes after genome-wide admixture in invasive sculpins (Cottus).

Czypionka T, Cheng J, Pozhitkov A, Nolte AW.

Mol Ecol. 2012 Oct;21(19):4797-810. doi: 10.1111/j.1365-294X.2012.05645.x. Epub 2012 May 31.

PMID:
22650446
13.

High-throughput methods for analysis of the human oral microbiome.

Pozhitkov AE, Beikler T, Flemmig T, Noble PA.

Periodontol 2000. 2011 Feb;55(1):70-86. doi: 10.1111/j.1600-0757.2010.00380.x. Review. No abstract available.

PMID:
21134229
14.

Constructing a fish metabolic network model.

Li S, Pozhitkov A, Ryan RA, Manning CS, Brown-Peterson N, Brouwer M.

Genome Biol. 2010;11(11):R115. doi: 10.1186/gb-2010-11-11-r115. Epub 2010 Nov 29.

15.

Linking probe thermodynamics to microarray quantification.

Li S, Pozhitkov A, Brouwer M.

Phys Biol. 2010 Nov 12;7(4):048001; discussion 048002. doi: 10.1088/1478-3975/7/4/048001.

PMID:
21076201
16.

Generation, analysis and functional annotation of expressed sequence tags from the sheepshead minnow (Cyprinodon variegatus).

Pirooznia M, Pozhitkov A, Perkins EJ, Deng Y, Brouwer M.

BMC Genomics. 2010 Nov 2;11 Suppl 2:S4. doi: 10.1186/1471-2164-11-S2-S4.

17.

Scanner calibration revisited.

Pozhitkov AE.

BMC Bioinformatics. 2010 Jul 1;11:361. doi: 10.1186/1471-2105-11-361.

18.

Beyond Affymetrix arrays: expanding the set of known hybridization isotherms and observing pre-wash signal intensities.

Pozhitkov AE, Boube I, Brouwer MH, Noble PA.

Nucleic Acids Res. 2010 Mar;38(5):e28. doi: 10.1093/nar/gkp1122. Epub 2009 Dec 6.

19.

Functioning in situ: gene expression in Methylotenera mobilis in its native environment as assessed through transcriptomics.

Kalyuzhnaya MG, Beck DA, Suciu D, Pozhitkov A, Lidstrom ME, Chistoserdova L.

ISME J. 2010 Mar;4(3):388-98. doi: 10.1038/ismej.2009.117. Epub 2009 Nov 19.

PMID:
19924155
20.

Use of hidden correlations in short oligonucleotide array data are insufficient for accurate quantification of nucleic acid targets in complex target mixtures.

Rule RA, Pozhitkov AE, Noble PA.

J Microbiol Methods. 2009 Feb;76(2):188-95. doi: 10.1016/j.mimet.2008.10.011. Epub 2008 Oct 30.

PMID:
19007823

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