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Items: 1 to 20 of 106

1.

Oak genome reveals facets of long lifespan.

Plomion C, Aury JM, Amselem J, Leroy T, Murat F, Duplessis S, Faye S, Francillonne N, Labadie K, Le Provost G, Lesur I, Bartholomé J, Faivre-Rampant P, Kohler A, Leplé JC, Chantret N, Chen J, Diévart A, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Bogeat-Triboulot MB, Bouffaud ML, Brachi B, Chancerel E, Cohen D, Couloux A, Da Silva C, Dossat C, Ehrenmann F, Gaspin C, Grima-Pettenati J, Guichoux E, Hecker A, Herrmann S, Hugueney P, Hummel I, Klopp C, Lalanne C, Lascoux M, Lasserre E, Lemainque A, Desprez-Loustau ML, Luyten I, Madoui MA, Mangenot S, Marchal C, Maumus F, Mercier J, Michotey C, Panaud O, Picault N, Rouhier N, Rué O, Rustenholz C, Salin F, Soler M, Tarkka M, Velt A, Zanne AE, Martin F, Wincker P, Quesneville H, Kremer A, Salse J.

Nat Plants. 2018 Jun 18. doi: 10.1038/s41477-018-0172-3. [Epub ahead of print]

PMID:
29915331
2.

Gaining a global perspective on Fagaceae genomic diversification and adaptation.

Cannon CH, Brendel O, Deng M, Hipp AL, Kremer A, Kua CS, Plomion C, Romero-Severson J, Sork VL.

New Phytol. 2018 May;218(3):894-897. doi: 10.1111/nph.15101. No abstract available.

PMID:
29658637
3.

High-Throughput DNA sequencing of ancient wood.

Wagner S, Lagane F, Seguin-Orlando A, Schubert M, Leroy T, Guichoux E, Chancerel E, Bech-Hebelstrup I, Bernard V, Billard C, Billaud Y, Bolliger M, Croutsch C, Čufar K, Eynaud F, Heussner KU, Köninger J, Langenegger F, Leroy F, Lima C, Martinelli N, Momber G, Billamboz A, Nelle O, Palomo A, Piqué R, Ramstein M, Schweichel R, Stäuble H, Tegel W, Terradas X, Verdin F, Plomion C, Kremer A, Orlando L.

Mol Ecol. 2018 Mar;27(5):1138-1154. doi: 10.1111/mec.14514. Epub 2018 Mar 3.

PMID:
29412519
4.

Correction: Linkage and Association Mapping for Two Major Traits Used in the Maritime Pine Breeding Program: Height Growth and Stem Straightness.

Bartholomé J, Bink MC, van Heerwaarden J, Chancerel E, Boury C, Lesur I, Isik F, Bouffier L, Plomion C.

PLoS One. 2017 Jan 30;12(1):e0171439. doi: 10.1371/journal.pone.0171439. eCollection 2017.

5.

Extensive recent secondary contacts between four European white oak species.

Leroy T, Roux C, Villate L, Bodénès C, Romiguier J, Paiva JA, Dossat C, Aury JM, Plomion C, Kremer A.

New Phytol. 2017 Apr;214(2):865-878. doi: 10.1111/nph.14413. Epub 2017 Jan 13.

6.

Advances in ecological genomics in forest trees and applications to genetic resources conservation and breeding.

Holliday JA, Aitken SN, Cooke JE, Fady B, González-Martínez SC, Heuertz M, Jaramillo-Correa JP, Lexer C, Staton M, Whetten RW, Plomion C.

Mol Ecol. 2017 Feb;26(3):706-717. doi: 10.1111/mec.13963. Epub 2017 Jan 27.

PMID:
27997049
7.

Linkage and Association Mapping for Two Major Traits Used in the Maritime Pine Breeding Program: Height Growth and Stem Straightness.

Bartholomé J, Bink MC, van Heerwaarden J, Chancerel E, Boury C, Lesur I, Isik F, Bouffier L, Plomion C.

PLoS One. 2016 Nov 2;11(11):e0165323. doi: 10.1371/journal.pone.0165323. eCollection 2016. Erratum in: PLoS One. 2017 Jan 30;12 (1):e0171439.

8.

Performance of genomic prediction within and across generations in maritime pine.

Bartholomé J, Van Heerwaarden J, Isik F, Boury C, Vidal M, Plomion C, Bouffier L.

BMC Genomics. 2016 Aug 11;17(1):604. doi: 10.1186/s12864-016-2879-8.

9.

Implication of the suberin pathway in adaptation to waterlogging and hypertrophied lenticels formation in pedunculate oak (Quercus robur L.).

Le Provost G, Lesur I, Lalanne C, Da Silva C, Labadie K, Aury JM, Leple JC, Plomion C.

Tree Physiol. 2016 Nov;36(11):1330-1342. Epub 2016 Jun 29.

PMID:
27358207
10.

High-density linkage mapping and distribution of segregation distortion regions in the oak genome.

Bodénès C, Chancerel E, Ehrenmann F, Kremer A, Plomion C.

DNA Res. 2016 Apr;23(2):115-24. doi: 10.1093/dnares/dsw001. Epub 2016 Mar 23.

11.

Copper stress-induced changes in leaf soluble proteome of Cu-sensitive and tolerant Agrostis capillaris L. populations.

Hego E, Vilain S, Barré A, Claverol S, Dupuy JW, Lalanne C, Bonneu M, Plomion C, Mench M.

Proteomics. 2016 May;16(9):1386-97. doi: 10.1002/pmic.201500083.

PMID:
26900021
12.

Genomic Resources Notes Accepted 1 August 2015 - 31 September 2015.

Genomic Resources Development Consortium, Kohler A, Kremer A, Le Provost G, Lesur I, Lin G, Martin F, Plomion C, Wu A, Zhao F.

Mol Ecol Resour. 2016 Jan;16(1):377. doi: 10.1111/1755-0998.12482.

PMID:
26768197
13.

Genomic selection in maritime pine.

Isik F, Bartholomé J, Farjat A, Chancerel E, Raffin A, Sanchez L, Plomion C, Bouffier L.

Plant Sci. 2016 Jan;242:108-119. doi: 10.1016/j.plantsci.2015.08.006. Epub 2015 Aug 18.

PMID:
26566829
14.

Evidence of intense chromosomal shuffling during conifer evolution.

de Miguel M, Bartholomé J, Ehrenmann F, Murat F, Moriguchi Y, Uchiyama K, Ueno S, Tsumura Y, Lagraulet H, de Maria N, Cabezas JA, Cervera MT, Gion JM, Salse J, Plomion C.

Genome Biol Evol. 2015 Oct;7(10):2799-2809. Epub 2015 Sep 23.

15.

High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster).

Plomion C, Bartholomé J, Lesur I, Boury C, Rodríguez-Quilón I, Lagraulet H, Ehrenmann F, Bouffier L, Gion JM, Grivet D, de Miguel M, de María N, Cervera MT, Bagnoli F, Isik F, Vendramin GG, González-Martínez SC.

Mol Ecol Resour. 2016 Mar;16(2):574-87. doi: 10.1111/1755-0998.12464. Epub 2015 Oct 6.

PMID:
26358548
16.

Quantitative Proteomic and Phosphoproteomic Approaches for Deciphering the Signaling Pathway for Tension Wood Formation in Poplar.

Mauriat M, Leplé JC, Claverol S, Bartholomé J, Negroni L, Richet N, Lalanne C, Bonneu M, Coutand C, Plomion C.

J Proteome Res. 2015 Aug 7;14(8):3188-203. doi: 10.1021/acs.jproteome.5b00140. Epub 2015 Jul 8.

PMID:
26112267
17.

Nucleotide polymorphisms in a pine ortholog of the Arabidopsis degrading enzyme cellulase KORRIGAN are associated with early growth performance in Pinus pinaster.

Cabezas JA, González-Martínez SC, Collada C, Guevara MA, Boury C, de María N, Eveno E, Aranda I, Garnier-Géré PH, Brach J, Alía R, Plomion C, Cervera MT.

Tree Physiol. 2015 Sep;35(9):1000-6. doi: 10.1093/treephys/tpv050. Epub 2015 Jun 20.

PMID:
26093373
18.

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Plomion C, Aury JM, Amselem J, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Boudet N, Boury C, Canaguier A, Couloux A, Da Silva C, Duplessis S, Ehrenmann F, Estrada-Mairey B, Fouteau S, Francillonne N, Gaspin C, Guichard C, Klopp C, Labadie K, Lalanne C, Le Clainche I, Leplé JC, Le Provost G, Leroy T, Lesur I, Martin F, Mercier J, Michotey C, Murat F, Salin F, Steinbach D, Faivre-Rampant P, Wincker P, Salse J, Quesneville H, Kremer A.

Mol Ecol Resour. 2016 Jan;16(1):254-65. doi: 10.1111/1755-0998.12425. Epub 2015 May 29.

PMID:
25944057
19.

Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks.

Lepoittevin C, Bodénès C, Chancerel E, Villate L, Lang T, Lesur I, Boury C, Ehrenmann F, Zelenica D, Boland A, Besse C, Garnier-Géré P, Plomion C, Kremer A.

Mol Ecol Resour. 2015 Nov;15(6):1446-59. doi: 10.1111/1755-0998.12407. Epub 2015 Apr 6.

PMID:
25818027
20.

The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release.

Lesur I, Le Provost G, Bento P, Da Silva C, Leplé JC, Murat F, Ueno S, Bartholomé J, Lalanne C, Ehrenmann F, Noirot C, Burban C, Léger V, Amselem J, Belser C, Quesneville H, Stierschneider M, Fluch S, Feldhahn L, Tarkka M, Herrmann S, Buscot F, Klopp C, Kremer A, Salse J, Aury JM, Plomion C.

BMC Genomics. 2015 Feb 21;16:112. doi: 10.1186/s12864-015-1331-9.

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