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Items: 10

1.

BiPPred: Combined sequence- and structure-based prediction of peptide binding to the Hsp70 chaperone BiP.

Schneider M, Rosam M, Glaser M, Patronov A, Shah H, Back KC, Daake MA, Buchner J, Antes I.

Proteins. 2016 Oct;84(10):1390-407. doi: 10.1002/prot.25084. Epub 2016 Jul 13.

PMID:
27287023
2.

Multiple sclerosis: Molecular mimicry of an antimyelin HLA class I restricted T-cell receptor.

Rühl G, Niedl AG, Patronov A, Siewert K, Pinkert S, Kalemanov M, Friese MA, Attfield KE, Antes I, Hohlfeld R, Dornmair K.

Neurol Neuroimmunol Neuroinflamm. 2016 May 17;3(4):e241. doi: 10.1212/NXI.0000000000000241. eCollection 2016 Aug.

3.

A Cohesive and Integrated Platform for Immunogenicity Prediction.

Dimitrov I, Atanasova M, Patronov A, Flower DR, Doytchinova I.

Methods Mol Biol. 2016;1404:761-70. doi: 10.1007/978-1-4939-3389-1_50.

PMID:
27076336
4.

4-Fluoro-3',4',5'-trimethoxychalcone as a new anti-invasive agent. From discovery to initial validation in an in vivo metastasis model.

Roman BI, De Ryck T, Patronov A, Slavov SH, Vanhoecke BW, Katritzky AR, Bracke ME, Stevens CV.

Eur J Med Chem. 2015 Aug 28;101:627-39. doi: 10.1016/j.ejmech.2015.06.029. Epub 2015 Jul 10.

PMID:
26204510
5.

Histidine hydrogen bonding in MHC at pH 5 and pH 7 modeled by molecular docking and molecular dynamics simulations.

Patronov A, Salamanova E, Dimitrov I, Flower DR, Doytchinova I.

Curr Comput Aided Drug Des. 2014 Mar;10(1):41-9.

PMID:
24138415
6.

Immunoinformatic docking approach for the analysis of KIR3DL1/HLA-B interaction.

Grifoni A, Montesano C, Patronov A, Colizzi V, Amicosante M.

Biomed Res Int. 2013;2013:283805. doi: 10.1155/2013/283805. Epub 2013 Aug 1.

7.

EpiDOCK: a molecular docking-based tool for MHC class II binding prediction.

Atanasova M, Patronov A, Dimitrov I, Flower DR, Doytchinova I.

Protein Eng Des Sel. 2013 Oct;26(10):631-4. doi: 10.1093/protein/gzt018. Epub 2013 May 9.

PMID:
23661105
8.

T-cell epitope vaccine design by immunoinformatics.

Patronov A, Doytchinova I.

Open Biol. 2013 Jan 8;3(1):120139. doi: 10.1098/rsob.120139. Review.

9.

Peptide binding to HLA-DP proteins at pH 5.0 and pH 7.0: a quantitative molecular docking study.

Patronov A, Dimitrov I, Flower DR, Doytchinova I.

BMC Struct Biol. 2012 Aug 5;12:20. doi: 10.1186/1472-6807-12-20.

10.

Peptide binding prediction for the human class II MHC allele HLA-DP2: a molecular docking approach.

Patronov A, Dimitrov I, Flower DR, Doytchinova I.

BMC Struct Biol. 2011 Jul 14;11:32. doi: 10.1186/1472-6807-11-32.

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