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Items: 1 to 20 of 53

1.

Genome-wide signatures of flowering adaptation to climate temperature: Regional analyses in a highly diverse native range of Arabidopsis thaliana.

Tabas-Madrid D, Méndez-Vigo B, Arteaga N, Marcer A, Pascual-Montano A, Weigel D, Xavier Picó F, Alonso-Blanco C.

Plant Cell Environ. 2018 Mar 8. doi: 10.1111/pce.13189. [Epub ahead of print]

PMID:
29520809
2.

miRNA profiling during antigen-dependent T cell activation: A role for miR-132-3p.

Gutiérrez-Vázquez C, Rodríguez-Galán A, Fernández-Alfara M, Mittelbrunn M, Sánchez-Cabo F, Martínez-Herrera DJ, Ramírez-Huesca M, Pascual-Montano A, Sánchez-Madrid F.

Sci Rep. 2017 Jun 14;7(1):3508. doi: 10.1038/s41598-017-03689-7.

3.

Gene signature associated with benign neurofibroma transformation to malignant peripheral nerve sheath tumors.

Martínez M, Sorzano COS, Pascual-Montano A, Carazo JM.

PLoS One. 2017 May 24;12(5):e0178316. doi: 10.1371/journal.pone.0178316. eCollection 2017.

4.

Distinct Molecular Signature of Murine Fetal Liver and Adult Hematopoietic Stem Cells Identify Novel Regulators of Hematopoietic Stem Cell Function.

Manesia JK, Franch M, Tabas-Madrid D, Nogales-Cadenas R, Vanwelden T, Van Den Bosch E, Xu Z, Pascual-Montano A, Khurana S, Verfaillie CM.

Stem Cells Dev. 2017 Apr 15;26(8):573-584. doi: 10.1089/scd.2016.0294. Epub 2017 Feb 13.

5.

Notch-regulated miR-223 targets the aryl hydrocarbon receptor pathway and increases cytokine production in macrophages from rheumatoid arthritis patients.

Ogando J, Tardáguila M, Díaz-Alderete A, Usategui A, Miranda-Ramos V, Martínez-Herrera DJ, de la Fuente L, García-León MJ, Moreno MC, Escudero S, Cañete JD, Toribio ML, Cases I, Pascual-Montano A, Pablos JL, Mañes S.

Sci Rep. 2016 Feb 3;6:20223. doi: 10.1038/srep20223.

6.

Highly proliferative primitive fetal liver hematopoietic stem cells are fueled by oxidative metabolic pathways.

Manesia JK, Xu Z, Broekaert D, Boon R, van Vliet A, Eelen G, Vanwelden T, Stegen S, Van Gastel N, Pascual-Montano A, Fendt SM, Carmeliet G, Carmeliet P, Khurana S, Verfaillie CM.

Stem Cell Res. 2015 Nov;15(3):715-721. doi: 10.1016/j.scr.2015.11.001. Epub 2015 Nov 9.

7.

Proteogenomics Dashboard for the Human Proteome Project.

Tabas-Madrid D, Alves-Cruzeiro J, Segura V, Guruceaga E, Vialas V, Prieto G, García C, Corrales FJ, Albar JP, Pascual-Montano A.

J Proteome Res. 2015 Sep 4;14(9):3738-49. doi: 10.1021/acs.jproteome.5b00466. Epub 2015 Jul 16.

PMID:
26144527
8.

Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project.

Horvatovich P, Lundberg EK, Chen YJ, Sung TY, He F, Nice EC, Goode RJ, Yu S, Ranganathan S, Baker MS, Domont GB, Velasquez E, Li D, Liu S, Wang Q, He QY, Menon R, Guan Y, Corrales FJ, Segura V, Casal JI, Pascual-Montano A, Albar JP, Fuentes M, Gonzalez-Gonzalez M, Diez P, Ibarrola N, Degano RM, Mohammed Y, Borchers CH, Urbani A, Soggiu A, Yamamoto T, Salekdeh GH, Archakov A, Ponomarenko E, Lisitsa A, Lichti CF, Mostovenko E, Kroes RA, Rezeli M, Végvári Á, Fehniger TE, Bischoff R, Vizcaíno JA, Deutsch EW, Lane L, Nilsson CL, Marko-Varga G, Omenn GS, Jeong SK, Lim JS, Paik YK, Hancock WS.

J Proteome Res. 2015 Sep 4;14(9):3415-31. doi: 10.1021/pr5013009. Epub 2015 Jul 23.

PMID:
26076068
9.

NFFinder: an online bioinformatics tool for searching similar transcriptomics experiments in the context of drug repositioning.

Setoain J, Franch M, Martínez M, Tabas-Madrid D, Sorzano CO, Bakker A, Gonzalez-Couto E, Elvira J, Pascual-Montano A.

Nucleic Acids Res. 2015 Jul 1;43(W1):W193-9. doi: 10.1093/nar/gkv445. Epub 2015 May 4.

10.

NMF-mGPU: non-negative matrix factorization on multi-GPU systems.

Mejía-Roa E, Tabas-Madrid D, Setoain J, García C, Tirado F, Pascual-Montano A.

BMC Bioinformatics. 2015 Feb 13;16:43. doi: 10.1186/s12859-015-0485-4.

11.

A subpopulation of CD103(pos) ICOS(pos) Treg cells occurs at high frequency in lymphopenic mice and represents a lymph node specific differentiation stage.

Barthlott T, Bosch AJ, Berkemeier C, Nogales-Cadenas R, Jeker LT, Keller MP, Pascual-Montano A, Holländer GA.

Eur J Immunol. 2015 Jun;45(6):1760-71. doi: 10.1002/eji.201445235. Epub 2015 Apr 17.

12.

Improving miRNA-mRNA interaction predictions.

Tabas-Madrid D, Muniategui A, Sánchez-Caballero I, Martínez-Herrera DJ, Sorzano CO, Rubio A, Pascual-Montano A.

BMC Genomics. 2014;15 Suppl 10:S2. doi: 10.1186/1471-2164-15-S10-S2. Epub 2014 Dec 12.

13.

miR-217 is an oncogene that enhances the germinal center reaction.

de Yébenes VG, Bartolomé-Izquierdo N, Nogales-Cadenas R, Pérez-Durán P, Mur SM, Martínez N, Di Lisio L, Robbiani DF, Pascual-Montano A, Cañamero M, Piris MA, Ramiro AR.

Blood. 2014 Jul 10;124(2):229-39. doi: 10.1182/blood-2013-12-543611. Epub 2014 May 21.

14.

Sumoylated hnRNPA2B1 controls the sorting of miRNAs into exosomes through binding to specific motifs.

Villarroya-Beltri C, Gutiérrez-Vázquez C, Sánchez-Cabo F, Pérez-Hernández D, Vázquez J, Martin-Cofreces N, Martinez-Herrera DJ, Pascual-Montano A, Mittelbrunn M, Sánchez-Madrid F.

Nat Commun. 2013;4:2980. doi: 10.1038/ncomms3980.

15.

CentrosomeDB: a new generation of the centrosomal proteins database for Human and Drosophila melanogaster.

Alves-Cruzeiro JM, Nogales-Cadenas R, Pascual-Montano AD.

Nucleic Acids Res. 2014 Jan;42(Database issue):D430-6. doi: 10.1093/nar/gkt1126. Epub 2013 Nov 21.

16.

Surfing transcriptomic landscapes. A step beyond the annotation of chromosome 16 proteome.

Segura V, Medina-Aunon JA, Mora MI, Martínez-Bartolomé S, Abian J, Aloria K, Antúnez O, Arizmendi JM, Azkargorta M, Barceló-Batllori S, Beaskoetxea J, Bech-Serra JJ, Blanco F, Monteiro MB, Cáceres D, Canals F, Carrascal M, Casal JI, Clemente F, Colomé N, Dasilva N, Díaz P, Elortza F, Fernández-Puente P, Fuentes M, Gallardo O, Gharbi SI, Gil C, González-Tejedo C, Hernáez ML, Lombardía M, Lopez-Lucendo M, Marcilla M, Mato JM, Mendes M, Oliveira E, Orera I, Pascual-Montano A, Prieto G, Ruiz-Romero C, Sánchez del Pino MM, Tabas-Madrid D, Valero ML, Vialas V, Villanueva J, Albar JP, Corrales FJ.

J Proteome Res. 2014 Jan 3;13(1):158-72. doi: 10.1021/pr400721r. Epub 2013 Nov 5.

PMID:
24138474
17.

Unraveling a novel transcription factor code determining the human arterial-specific endothelial cell signature.

Aranguren XL, Agirre X, Beerens M, Coppiello G, Uriz M, Vandersmissen I, Benkheil M, Panadero J, Aguado N, Pascual-Montano A, Segura V, Prósper F, Luttun A.

Blood. 2013 Dec 5;122(24):3982-92. doi: 10.1182/blood-2013-02-483255. Epub 2013 Oct 9.

18.

Chromothripsis: breakage-fusion-bridge over and over again.

Sorzano CO, Pascual-Montano A, Sánchez de Diego A, Martínez-A C, van Wely KH.

Cell Cycle. 2013 Jul 1;12(13):2016-23. doi: 10.4161/cc.25266. Epub 2013 Jun 11.

19.

3DEM Loupe: Analysis of macromolecular dynamics using structures from electron microscopy.

Nogales-Cadenas R, Jonic S, Tama F, Arteni AA, Tabas-Madrid D, Vázquez M, Pascual-Montano A, Sorzano CO.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W363-7. doi: 10.1093/nar/gkt385. Epub 2013 May 13.

20.

MicroRNAs control the maintenance of thymic epithelia and their competence for T lineage commitment and thymocyte selection.

Zuklys S, Mayer CE, Zhanybekova S, Stefanski HE, Nusspaumer G, Gill J, Barthlott T, Chappaz S, Nitta T, Dooley J, Nogales-Cadenas R, Takahama Y, Finke D, Liston A, Blazar BR, Pascual-Montano A, Holländer GA.

J Immunol. 2012 Oct 15;189(8):3894-904. doi: 10.4049/jimmunol.1200783. Epub 2012 Sep 12.

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