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Items: 17

1.

Vitamin D, Fibroblast Growth Factor 23 and Incident Cognitive Impairment: Findings from the REGARDS Study.

Panwar B, Judd SE, Howard VJ, Jenny NS, Wadley VG, Gutiérrez OM.

PLoS One. 2016 Nov 3;11(11):e0165671. doi: 10.1371/journal.pone.0165671. eCollection 2016.

2.

Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis.

Sieberts SK, Zhu F, García-García J, Stahl E, Pratap A, Pandey G, Pappas D, Aguilar D, Anton B, Bonet J, Eksi R, Fornés O, Guney E, Li H, Marín MA, Panwar B, Planas-Iglesias J, Poglayen D, Cui J, Falcao AO, Suver C, Hoff B, Balagurusamy VS, Dillenberger D, Neto EC, Norman T, Aittokallio T, Ammad-Ud-Din M, Azencott CA, Bellón V, Boeva V, Bunte K, Chheda H, Cheng L, Corander J, Dumontier M, Goldenberg A, Gopalacharyulu P, Hajiloo M, Hidru D, Jaiswal A, Kaski S, Khalfaoui B, Khan SA, Kramer ER, Marttinen P, Mezlini AM, Molparia B, Pirinen M, Saarela J, Samwald M, Stoven V, Tang H, Tang J, Torkamani A, Vert JP, Wang B, Wang T, Wennerberg K, Wineinger NE, Xiao G, Xie Y, Yeung R, Zhan X, Zhao C; Members of the Rheumatoid Arthritis Challenge Consortium, Greenberg J, Kremer J, Michaud K, Barton A, Coenen M, Mariette X, Miceli C, Shadick N, Weinblatt M, de Vries N, Tak PP, Gerlag D, Huizinga TW, Kurreeman F, Allaart CF, Bridges SL Jr, Criswell L, Moreland L, Klareskog L, Saevarsdottir S, Padyukov L, Gregersen PK, Friend S, Plenge R, Stolovitzky G, Oliva B, Guan Y, Mangravite LM.

Nat Commun. 2016 Oct 10;7:13205. doi: 10.1038/ncomms13205. No abstract available.

3.

COMPASS: A computational model to predict changes in MMSE scores 24-months after initial assessment of Alzheimer's disease.

Zhu F, Panwar B, Dodge HH, Li H, Hampstead BM, Albin RL, Paulson HL, Guan Y.

Sci Rep. 2016 Oct 5;6:34567. doi: 10.1038/srep34567.

4.

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis.

Sieberts SK, Zhu F, García-García J, Stahl E, Pratap A, Pandey G, Pappas D, Aguilar D, Anton B, Bonet J, Eksi R, Fornés O, Guney E, Li H, Marín MA, Panwar B, Planas-Iglesias J, Poglayen D, Cui J, Falcao AO, Suver C, Hoff B, Balagurusamy VS, Dillenberger D, Neto EC, Norman T, Aittokallio T, Ammad-Ud-Din M, Azencott CA, Bellón V, Boeva V, Bunte K, Chheda H, Cheng L, Corander J, Dumontier M, Goldenberg A, Gopalacharyulu P, Hajiloo M, Hidru D, Jaiswal A, Kaski S, Khalfaoui B, Khan SA, Kramer ER, Marttinen P, Mezlini AM, Molparia B, Pirinen M, Saarela J, Samwald M, Stoven V, Tang H, Tang J, Torkamani A, Vert JP, Wang B, Wang T, Wennerberg K, Wineinger NE, Xiao G, Xie Y, Yeung R, Zhan X, Zhao C; Members of the Rheumatoid Arthritis Challenge Consortium, Greenberg J, Kremer J, Michaud K, Barton A, Coenen M, Mariette X, Miceli C, Shadick N, Weinblatt M, de Vries N, Tak PP, Gerlag D, Huizinga TW, Kurreeman F, Allaart CF, Louis Bridges S Jr, Criswell L, Moreland L, Klareskog L, Saevarsdottir S, Padyukov L, Gregersen PK, Friend S, Plenge R, Stolovitzky G, Oliva B, Guan Y, Mangravite LM, Bridges SL, Criswell L, Moreland L, Klareskog L, Saevarsdottir S, Padyukov L, Gregersen PK, Friend S, Plenge R, Stolovitzky G, Oliva B, Guan Y, Mangravite LM.

Nat Commun. 2016 Aug 23;7:12460. doi: 10.1038/ncomms12460.

5.

Vitamin D deficiency and incident stroke risk in community-living black and white adults.

Judd SE, Morgan CJ, Panwar B, Howard VJ, Wadley VG, Jenny NS, Kissela BM, Gutiérrez OM.

Int J Stroke. 2016 Jan;11(1):93-102. doi: 10.1177/1747493015607515.

6.

Functional Networks of Highest-Connected Splice Isoforms: From The Chromosome 17 Human Proteome Project.

Li HD, Menon R, Govindarajoo B, Panwar B, Zhang Y, Omenn GS, Guan Y.

J Proteome Res. 2015 Sep 4;14(9):3484-91. doi: 10.1021/acs.jproteome.5b00494. Epub 2015 Aug 11.

7.

MI-PVT: A Tool for Visualizing the Chromosome-Centric Human Proteome.

Panwar B, Menon R, Eksi R, Omenn GS, Guan Y.

J Proteome Res. 2015 Sep 4;14(9):3762-7. doi: 10.1021/acs.jproteome.5b00525. Epub 2015 Aug 3.

8.

Computational Inferences of the Functions of Alternative/Noncanonical Splice Isoforms Specific to HER2+/ER-/PR- Breast Cancers, a Chromosome 17 C-HPP Study.

Menon R, Panwar B, Eksi R, Kleer C, Guan Y, Omenn GS.

J Proteome Res. 2015 Sep 4;14(9):3519-29. doi: 10.1021/acs.jproteome.5b00498. Epub 2015 Jul 23.

9.

Fibroblast growth factor 23 and risk of incident stroke in community-living adults.

Panwar B, Jenny NS, Howard VJ, Wadley VG, Muntner P, Kissela BM, Judd SE, Gutiérrez OM.

Stroke. 2015 Feb;46(2):322-8. doi: 10.1161/STROKEAHA.114.007489. Epub 2015 Jan 6.

10.

Obesity, metabolic health, and the risk of end-stage renal disease.

Panwar B, Hanks LJ, Tanner RM, Muntner P, Kramer H, McClellan WM, Warnock DG, Judd SE, Gutiérrez OM.

Kidney Int. 2015 Jun;87(6):1216-22. doi: 10.1038/ki.2014.384. Epub 2014 Dec 17.

11.

Prediction of uridine modifications in tRNA sequences.

Panwar B, Raghava GP.

BMC Bioinformatics. 2014 Oct 2;15:326. doi: 10.1186/1471-2105-15-326.

12.

Prediction and classification of ncRNAs using structural information.

Panwar B, Arora A, Raghava GP.

BMC Genomics. 2014 Feb 13;15:127. doi: 10.1186/1471-2164-15-127.

13.

lncRNome: a comprehensive knowledgebase of human long noncoding RNAs.

Bhartiya D, Pal K, Ghosh S, Kapoor S, Jalali S, Panwar B, Jain S, Sati S, Sengupta S, Sachidanandan C, Raghava GP, Sivasubbu S, Scaria V.

Database (Oxford). 2013 Jul 11;2013:bat034. doi: 10.1093/database/bat034. Print 2013.

14.

Prediction of vitamin interacting residues in a vitamin binding protein using evolutionary information.

Panwar B, Gupta S, Raghava GP.

BMC Bioinformatics. 2013 Feb 7;14:44. doi: 10.1186/1471-2105-14-44.

15.

Analysis and prediction of cancerlectins using evolutionary and domain information.

Kumar R, Panwar B, Chauhan JS, Raghava GP.

BMC Res Notes. 2011 Jul 20;4:237. doi: 10.1186/1756-0500-4-237.

16.

Prediction and classification of aminoacyl tRNA synthetases using PROSITE domains.

Panwar B, Raghava GP.

BMC Genomics. 2010 Sep 22;11:507. doi: 10.1186/1471-2164-11-507.

17.

BIAdb: a curated database of benzylisoquinoline alkaloids.

Singla D, Sharma A, Kaur J, Panwar B, Raghava GP.

BMC Pharmacol. 2010 Mar 5;10:4. doi: 10.1186/1471-2210-10-4.

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