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Items: 1 to 20 of 60

1.

Transcriptomic and microRNAomic profiling reveals multi-faceted mechanisms to cope with phosphate stress in a dinoflagellate.

Shi X, Lin X, Li L, Li M, Palenik B, Lin S.

ISME J. 2017 Oct;11(10):2209-2218. doi: 10.1038/ismej.2017.81. Epub 2017 May 26.

PMID:
28548660
2.

Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton.

Paerl RW, Bouget FY, Lozano JC, Vergé V, Schatt P, Allen EE, Palenik B, Azam F.

ISME J. 2017 Mar;11(3):753-765. doi: 10.1038/ismej.2016.145. Epub 2016 Dec 9.

3.

Copper toxicity response influences mesotrophic Synechococcus community structure.

Stuart RK, Bundy R, Buck K, Ghassemain M, Barbeau K, Palenik B.

Environ Microbiol. 2017 Feb;19(2):756-769. doi: 10.1111/1462-2920.13630. Epub 2017 Jan 26.

PMID:
27884049
4.

Comparison of the seasonal variations of Synechococcus assemblage structures in estuarine waters and coastal waters of Hong Kong.

Xia X, Vidyarathna NK, Palenik B, Lee P, Liu H.

Appl Environ Microbiol. 2015 Nov;81(21):7644-55. doi: 10.1128/AEM.01895-15. Epub 2015 Aug 28.

5.

Diversity and genome dynamics of marine cyanophages using metagenomic analyses.

Ma Y, Allen LZ, Palenik B.

Environ Microbiol Rep. 2014 Dec;6(6):583-94.

PMID:
25756111
6.

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities.

Dupont CL, McCrow JP, Valas R, Moustafa A, Walworth N, Goodenough U, Roth R, Hogle SL, Bai J, Johnson ZI, Mann E, Palenik B, Barbeau KA, Venter JC, Allen AE.

ISME J. 2015 May;9(5):1076-92. doi: 10.1038/ismej.2014.198. Epub 2014 Oct 21.

7.

Molecular mechanisms by which marine phytoplankton respond to their dynamic chemical environment.

Palenik B.

Ann Rev Mar Sci. 2015;7:325-40. doi: 10.1146/annurev-marine-010814-015639. Epub 2014 Sep 3. Review.

PMID:
25195866
8.

Broad-host-range vector system for synthetic biology and biotechnology in cyanobacteria.

Taton A, Unglaub F, Wright NE, Zeng WY, Paz-Yepes J, Brahamsha B, Palenik B, Peterson TC, Haerizadeh F, Golden SS, Golden JW.

Nucleic Acids Res. 2014;42(17):e136. doi: 10.1093/nar/gku673. Epub 2014 Jul 29.

9.

Genome of the halotolerant green alga Picochlorum sp. reveals strategies for thriving under fluctuating environmental conditions.

Foflonker F, Price DC, Qiu H, Palenik B, Wang S, Bhattacharya D.

Environ Microbiol. 2015 Feb;17(2):412-26. doi: 10.1111/1462-2920.12541. Epub 2014 Jul 24.

PMID:
24965277
10.

The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing.

Keeling PJ, Burki F, Wilcox HM, Allam B, Allen EE, Amaral-Zettler LA, Armbrust EV, Archibald JM, Bharti AK, Bell CJ, Beszteri B, Bidle KD, Cameron CT, Campbell L, Caron DA, Cattolico RA, Collier JL, Coyne K, Davy SK, Deschamps P, Dyhrman ST, Edvardsen B, Gates RD, Gobler CJ, Greenwood SJ, Guida SM, Jacobi JL, Jakobsen KS, James ER, Jenkins B, John U, Johnson MD, Juhl AR, Kamp A, Katz LA, Kiene R, Kudryavtsev A, Leander BS, Lin S, Lovejoy C, Lynn D, Marchetti A, McManus G, Nedelcu AM, Menden-Deuer S, Miceli C, Mock T, Montresor M, Moran MA, Murray S, Nadathur G, Nagai S, Ngam PB, Palenik B, Pawlowski J, Petroni G, Piganeau G, Posewitz MC, Rengefors K, Romano G, Rumpho ME, Rynearson T, Schilling KB, Schroeder DC, Simpson AG, Slamovits CH, Smith DR, Smith GJ, Smith SR, Sosik HM, Stief P, Theriot E, Twary SN, Umale PE, Vaulot D, Wawrik B, Wheeler GL, Wilson WH, Xu Y, Zingone A, Worden AZ.

PLoS Biol. 2014 Jun 24;12(6):e1001889. doi: 10.1371/journal.pbio.1001889. eCollection 2014 Jun. No abstract available.

11.

Microalgal assemblages in a poikilohaline pond.

Wang S, Lambert W, Giang S, Goericke R, Palenik B.

J Phycol. 2014 Apr;50(2):303-9. doi: 10.1111/jpy.12158. Epub 2014 Feb 12.

PMID:
26988187
12.

Exposure to bloom-like concentrations of two marine Synechococcus cyanobacteria (strains CC9311 and CC9902) differentially alters fish behaviour.

Hamilton TJ, Paz-Yepes J, Morrison RA, Palenik B, Tresguerres M.

Conserv Physiol. 2014 Jun 5;2(1):cou020. doi: 10.1093/conphys/cou020. eCollection 2014.

13.

Impact of DNA damaging agents on genome-wide transcriptional profiles in two marine Synechococcus species.

Tetu SG, Johnson DA, Varkey D, Phillippy K, Stuart RK, Dupont CL, Hassan KA, Palenik B, Paulsen IT.

Front Microbiol. 2013 Aug 16;4:232. doi: 10.3389/fmicb.2013.00232. eCollection 2013.

14.

Role of a microcin-C-like biosynthetic gene cluster in allelopathic interactions in marine Synechococcus.

Paz-Yepes J, Brahamsha B, Palenik B.

Proc Natl Acad Sci U S A. 2013 Jul 16;110(29):12030-5. doi: 10.1073/pnas.1306260110. Epub 2013 Jul 1.

15.

Bringing the ocean into the laboratory to probe the chemical complexity of sea spray aerosol.

Prather KA, Bertram TH, Grassian VH, Deane GB, Stokes MD, Demott PJ, Aluwihare LI, Palenik BP, Azam F, Seinfeld JH, Moffet RC, Molina MJ, Cappa CD, Geiger FM, Roberts GC, Russell LM, Ault AP, Baltrusaitis J, Collins DB, Corrigan CE, Cuadra-Rodriguez LA, Ebben CJ, Forestieri SD, Guasco TL, Hersey SP, Kim MJ, Lambert WF, Modini RL, Mui W, Pedler BE, Ruppel MJ, Ryder OS, Schoepp NG, Sullivan RC, Zhao D.

Proc Natl Acad Sci U S A. 2013 May 7;110(19):7550-5. doi: 10.1073/pnas.1300262110. Epub 2013 Apr 25.

16.

Genomic island genes in a coastal marine Synechococcus strain confer enhanced tolerance to copper and oxidative stress.

Stuart RK, Brahamsha B, Busby K, Palenik B.

ISME J. 2013 Jun;7(6):1139-49. doi: 10.1038/ismej.2012.175. Epub 2013 Jan 24.

17.

Genetic identification of a high-affinity Ni transporter and the transcriptional response to Ni deprivation in Synechococcus sp. strain WH8102.

Dupont CL, Johnson DA, Phillippy K, Paulsen IT, Brahamsha B, Palenik B.

Appl Environ Microbiol. 2012 Nov;78(22):7822-32. doi: 10.1128/AEM.01739-12. Epub 2012 Aug 17.

18.

Analysis of two marine metagenomes reveals the diversity of plasmids in oceanic environments.

Ma Y, Paulsen IT, Palenik B.

Environ Microbiol. 2012 Feb;14(2):453-66. doi: 10.1111/j.1462-2920.2011.02633.x. Epub 2011 Nov 8.

PMID:
22059529
19.

Learning to read the oceans genomics of marine phytoplankton.

Rynearson TA, Palenik B.

Adv Mar Biol. 2011;60:1-39. doi: 10.1016/B978-0-12-385529-9.00001-9. Review.

PMID:
21962749
20.

Selection in coastal Synechococcus (cyanobacteria) populations evaluated from environmental metagenomes.

Tai V, Poon AF, Paulsen IT, Palenik B.

PLoS One. 2011;6(9):e24249. doi: 10.1371/journal.pone.0024249. Epub 2011 Sep 9.

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