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Items: 8

1.
2.

Inferred spoligoforest topology unravels spatially bimodal distribution of mutations in the DR region.

Ozcaglar C, Shabbeer A, Kurepina N, Rastogi N, Yener B, Bennett KP.

IEEE Trans Nanobioscience. 2012 Sep;11(3):191-202. doi: 10.1109/TNB.2012.2213265.

PMID:
22987125
3.

TB-Lineage: an online tool for classification and analysis of strains of Mycobacterium tuberculosis complex.

Shabbeer A, Cowan LS, Ozcaglar C, Rastogi N, Vandenberg SL, Yener B, Bennett KP.

Infect Genet Evol. 2012 Jun;12(4):789-97. doi: 10.1016/j.meegid.2012.02.010.

PMID:
22406225
4.

Epidemiological models of Mycobacterium tuberculosis complex infections.

Ozcaglar C, Shabbeer A, Vandenberg SL, Yener B, Bennett KP.

Math Biosci. 2012 Apr;236(2):77-96. doi: 10.1016/j.mbs.2012.02.003. Review.

5.

Data-driven insights into deletions of Mycobacterium tuberculosis complex chromosomal DR region using spoligoforests.

Ozcaglar C, Shabbeer A, Kurepina N, Yener B, Bennett KP.

Proceedings (IEEE Int Conf Bioinformatics Biomed). 2011:75-82.

6.

Sublineage structure analysis of Mycobacterium tuberculosis complex strains using multiple-biomarker tensors.

Ozcaglar C, Shabbeer A, Vandenberg S, Yener B, Bennett KP.

BMC Genomics. 2011;12 Suppl 2:S1. doi: 10.1186/1471-2164-12-S2-S1.

7.

Web tools for molecular epidemiology of tuberculosis.

Shabbeer A, Ozcaglar C, Yener B, Bennett KP.

Infect Genet Evol. 2012 Jun;12(4):767-81. doi: 10.1016/j.meegid.2011.08.019.

PMID:
21903179
8.

Examining the sublineage structure of Mycobacterium tuberculosis complex strains with multiple-biomarker tensors.

Ozcaglar C, Shabbeer A, Vandenberg S, Yener B, Bennett KP.

Proceedings (IEEE Int Conf Bioinformatics Biomed). 2010:543-548.

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