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Items: 1 to 20 of 78

1.

Genomic history of the Sardinian population.

Chiang CWK, Marcus JH, Sidore C, Biddanda A, Al-Asadi H, Zoledziewska M, Pitzalis M, Busonero F, Maschio A, Pistis G, Steri M, Angius A, Lohmueller KE, Abecasis GR, Schlessinger D, Cucca F, Novembre J.

Nat Genet. 2018 Sep 17. doi: 10.1038/s41588-018-0215-8. [Epub ahead of print]

PMID:
30224645
2.

Inference and visualization of DNA damage patterns using a Grade of Membership Model.

Al-Asadi H, Dey KK, Novembre J, Stephens M.

Bioinformatics. 2018 Sep 6. doi: 10.1093/bioinformatics/bty779. [Epub ahead of print]

PMID:
30192911
3.

Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal.

Jeong C, Witonsky DB, Basnyat B, Neupane M, Beall CM, Childs G, Craig SR, Novembre J, Di Rienzo A.

PLoS Genet. 2018 Sep 6;14(9):e1007650. doi: 10.1371/journal.pgen.1007650. eCollection 2018 Sep.

4.

Brad McRae (1966-2017).

Novembre J, Beier P, Fargione J, Lawler J, Selkoe K.

Mol Ecol. 2018 Aug;27(15):3035-3036. doi: 10.1111/mec.14568. No abstract available.

PMID:
30133873
5.

The first horse herders and the impact of early Bronze Age steppe expansions into Asia.

de Barros Damgaard P, Martiniano R, Kamm J, Moreno-Mayar JV, Kroonen G, Peyrot M, Barjamovic G, Rasmussen S, Zacho C, Baimukhanov N, Zaibert V, Merz V, Biddanda A, Merz I, Loman V, Evdokimov V, Usmanova E, Hemphill B, Seguin-Orlando A, Yediay FE, Ullah I, Sjögren KG, Iversen KH, Choin J, de la Fuente C, Ilardo M, Schroeder H, Moiseyev V, Gromov A, Polyakov A, Omura S, Senyurt SY, Ahmad H, McKenzie C, Margaryan A, Hameed A, Samad A, Gul N, Khokhar MH, Goriunova OI, Bazaliiskii VI, Novembre J, Weber AW, Orlando L, Allentoft ME, Nielsen R, Kristiansen K, Sikora M, Outram AK, Durbin R, Willerslev E.

Science. 2018 Jun 29;360(6396). pii: eaar7711. doi: 10.1126/science.aar7711. Epub 2018 May 9.

PMID:
29743352
6.

Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves.

Schweizer RM, Durvasula A, Smith J, Vohr SH, Stahler DR, Galaverni M, Thalmann O, Smith DW, Randi E, Ostrander EA, Green RE, Lohmueller KE, Novembre J, Wayne RK.

Mol Biol Evol. 2018 May 1;35(5):1190-1209. doi: 10.1093/molbev/msy031.

PMID:
29688543
7.

Using pseudoalignment and base quality to accurately quantify microbial community composition.

Reppell M, Novembre J.

PLoS Comput Biol. 2018 Apr 16;14(4):e1006096. doi: 10.1371/journal.pcbi.1006096. eCollection 2018 Apr.

8.

Tread Lightly Interpreting Polygenic Tests of Selection.

Novembre J, Barton NH.

Genetics. 2018 Apr;208(4):1351-1355. doi: 10.1534/genetics.118.300786. No abstract available. Erratum in: Genetics. 2018 Jun;209(2):627.

9.

Estimating Time to the Common Ancestor for a Beneficial Allele.

Smith J, Coop G, Stephens M, Novembre J.

Mol Biol Evol. 2018 Apr 1;35(4):1003-1017. doi: 10.1093/molbev/msy006.

10.

Similar genomic proportions of copy number variation within gray wolves and modern dog breeds inferred from whole genome sequencing.

Serres-Armero A, Povolotskaya IS, Quilez J, Ramirez O, Santpere G, Kuderna LFK, Hernandez-Rodriguez J, Fernandez-Callejo M, Gomez-Sanchez D, Freedman AH, Fan Z, Novembre J, Navarro A, Boyko A, Wayne R, Vilà C, Lorente-Galdos B, Marques-Bonet T.

BMC Genomics. 2017 Dec 19;18(1):977. doi: 10.1186/s12864-017-4318-x.

11.

Correction: A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.

Jeong C, Peter BM, Basnyat B, Neupane M, Beall CM, Childs G, Craig SR, Novembre J, Di Rienzo A.

PLoS One. 2017 Aug 10;12(8):e0183407. doi: 10.1371/journal.pone.0183407. eCollection 2017.

12.

A longitudinal cline characterizes the genetic structure of human populations in the Tibetan plateau.

Jeong C, Peter BM, Basnyat B, Neupane M, Beall CM, Childs G, Craig SR, Novembre J, Di Rienzo A.

PLoS One. 2017 Apr 27;12(4):e0175885. doi: 10.1371/journal.pone.0175885. eCollection 2017. Erratum in: PLoS One. 2017 Aug 10;12 (8):e0183407.

13.

Overexpression of the Cytokine BAFF and Autoimmunity Risk.

Steri M, Orrù V, Idda ML, Pitzalis M, Pala M, Zara I, Sidore C, Faà V, Floris M, Deiana M, Asunis I, Porcu E, Mulas A, Piras MG, Lobina M, Lai S, Marongiu M, Serra V, Marongiu M, Sole G, Busonero F, Maschio A, Cusano R, Cuccuru G, Deidda F, Poddie F, Farina G, Dei M, Virdis F, Olla S, Satta MA, Pani M, Delitala A, Cocco E, Frau J, Coghe G, Lorefice L, Fenu G, Ferrigno P, Ban M, Barizzone N, Leone M, Guerini FR, Piga M, Firinu D, Kockum I, Lima Bomfim I, Olsson T, Alfredsson L, Suarez A, Carreira PE, Castillo-Palma MJ, Marcus JH, Congia M, Angius A, Melis M, Gonzalez A, Alarcón Riquelme ME, da Silva BM, Marchini M, Danieli MG, Del Giacco S, Mathieu A, Pani A, Montgomery SB, Rosati G, Hillert J, Sawcer S, D'Alfonso S, Todd JA, Novembre J, Abecasis GR, Whalen MB, Marrosu MG, Meloni A, Sanna S, Gorospe M, Schlessinger D, Fiorillo E, Zoledziewska M, Cucca F.

N Engl J Med. 2017 Apr 27;376(17):1615-1626. doi: 10.1056/NEJMoa1610528.

14.

Population- and individual-specific regulatory variation in Sardinia.

Pala M, Zappala Z, Marongiu M, Li X, Davis JR, Cusano R, Crobu F, Kukurba KR, Gloudemans MJ, Reinier F, Berutti R, Piras MG, Mulas A, Zoledziewska M, Marongiu M, Sorokin EP, Hess GT, Smith KS, Busonero F, Maschio A, Steri M, Sidore C, Sanna S, Fiorillo E, Bassik MC, Sawcer SJ, Battle A, Novembre J, Jones C, Angius A, Abecasis GR, Schlessinger D, Cucca F, Montgomery SB.

Nat Genet. 2017 May;49(5):700-707. doi: 10.1038/ng.3840. Epub 2017 Apr 10.

15.

A Temporal Perspective on the Interplay of Demography and Selection on Deleterious Variation in Humans.

Koch E, Novembre J.

G3 (Bethesda). 2017 Mar 10;7(3):1027-1037. doi: 10.1534/g3.117.039651.

16.

Reconstructing genetic history of Siberian and Northeastern European populations.

Wong EH, Khrunin A, Nichols L, Pushkarev D, Khokhrin D, Verbenko D, Evgrafov O, Knowles J, Novembre J, Limborska S, Valouev A.

Genome Res. 2017 Jan;27(1):1-14. doi: 10.1101/gr.202945.115. Epub 2016 Dec 13.

17.

Chimpanzee genomic diversity reveals ancient admixture with bonobos.

de Manuel M, Kuhlwilm M, Frandsen P, Sousa VC, Desai T, Prado-Martinez J, Hernandez-Rodriguez J, Dupanloup I, Lao O, Hallast P, Schmidt JM, Heredia-Genestar JM, Benazzo A, Barbujani G, Peter BM, Kuderna LF, Casals F, Angedakin S, Arandjelovic M, Boesch C, Kühl H, Vigilant L, Langergraber K, Novembre J, Gut M, Gut I, Navarro A, Carlsen F, Andrés AM, Siegismund HR, Scally A, Excoffier L, Tyler-Smith C, Castellano S, Xue Y, Hvilsom C, Marques-Bonet T.

Science. 2016 Oct 28;354(6311):477-481. Epub 2016 Oct 27.

18.

Visualizing the geography of genetic variants.

Marcus JH, Novembre J.

Bioinformatics. 2017 Feb 15;33(4):594-595. doi: 10.1093/bioinformatics/btw643.

19.

Pritchard, Stephens, and Donnelly on Population Structure.

Novembre J.

Genetics. 2016 Oct;204(2):391-393. Review. No abstract available.

20.

Recent advances in the study of fine-scale population structure in humans.

Novembre J, Peter BM.

Curr Opin Genet Dev. 2016 Dec;41:98-105. doi: 10.1016/j.gde.2016.08.007. Epub 2016 Sep 20. Review.

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