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PHD-2 Suppression in Mesenchymal Stromal Cells Enhances Wound Healing.

Ko SH, Nauta AC, Morrison SD, Hu MS, Zimmermann AS, Chung MT, Glotzbach JP, Wong VW, Walmsley GG, Peter Lorenz H, Chan DA, Gurtner GC, Giaccia AJ, Longaker MT.

Plast Reconstr Surg. 2018 Jan;141(1):55e-67e. doi: 10.1097/PRS.0000000000003959.


Development of an EliSPOT assay for HSV-1 and clinical validation in lung transplant patients.

Costa C, Di Nauta A, Rittà M, Sinesi F, Bianco G, Sidoti F, Solidoro P, Cavallo R.

New Microbiol. 2017 Oct;40(4):251-257.


Systematic review of the effects of the intestinal microbiota on selected nutrients and non-nutrients.

Shortt C, Hasselwander O, Meynier A, Nauta A, Fernández EN, Putz P, Rowland I, Swann J, Türk J, Vermeiren J, Antoine JM.

Eur J Nutr. 2018 Feb;57(1):25-49. doi: 10.1007/s00394-017-1546-4. Epub 2017 Oct 30. Review.


Metagenomic Approaches to Assess Bacteriophages in Various Environmental Niches.

Hayes S, Mahony J, Nauta A, van Sinderen D.

Viruses. 2017 May 24;9(6). pii: E127. doi: 10.3390/v9060127. Review.


Biocidal Inactivation of Lactococcus lactis Bacteriophages: Efficacy and Targets of Commonly Used Sanitizers.

Hayes S, Murphy J, Mahony J, Lugli GA, Ventura M, Noben JP, Franz CM, Neve H, Nauta A, Van Sinderen D.

Front Microbiol. 2017 Feb 2;8:107. doi: 10.3389/fmicb.2017.00107. eCollection 2017.


Homeostasis of the gut barrier and potential biomarkers.

Wells JM, Brummer RJ, Derrien M, MacDonald TT, Troost F, Cani PD, Theodorou V, Dekker J, Méheust A, de Vos WM, Mercenier A, Nauta A, Garcia-Rodenas CL.

Am J Physiol Gastrointest Liver Physiol. 2017 Mar 1;312(3):G171-G193. doi: 10.1152/ajpgi.00048.2015. Epub 2016 Dec 1. Review.


Age at the Time of Surgery and Maintenance of Head Size in Nonsyndromic Sagittal Craniosynostosis.

Bergquist CS, Nauta AC, Selden NR, Kuang AA.

Plast Reconstr Surg. 2016 May;137(5):1557-65. doi: 10.1097/PRS.0000000000002049.


Prebiotic-supplemented partially hydrolysed cow's milk formula for the prevention of eczema in high-risk infants: a randomized controlled trial.

Boyle RJ, Tang ML, Chiang WC, Chua MC, Ismail I, Nauta A, Hourihane JOB, Smith P, Gold M, Ziegler J, Peake J, Quinn P, Rao R, Brown N, Rijnierse A, Garssen J, Warner JO; PATCH study investigators.

Allergy. 2016 May;71(5):701-10. doi: 10.1111/all.12848. Epub 2016 Feb 26.


Comparative genomics and functional analysis of the 936 group of lactococcal Siphoviridae phages.

Murphy J, Bottacini F, Mahony J, Kelleher P, Neve H, Zomer A, Nauta A, van Sinderen D.

Sci Rep. 2016 Feb 19;6:21345. doi: 10.1038/srep21345.


Towards microbial fermentation metabolites as markers for health benefits of prebiotics.

Verbeke KA, Boobis AR, Chiodini A, Edwards CA, Franck A, Kleerebezem M, Nauta A, Raes J, van Tol EA, Tuohy KM.

Nutr Res Rev. 2015 Jun;28(1):42-66. doi: 10.1017/S0954422415000037. Review.


Methyltransferases acquired by lactococcal 936-type phage provide protection against restriction endonuclease activity.

Murphy J, Klumpp J, Mahony J, O'Connell-Motherway M, Nauta A, van Sinderen D.

BMC Genomics. 2014 Oct 1;15:831. doi: 10.1186/1471-2164-15-831.


Exploring the effects of galacto-oligosaccharides on the gut microbiota of healthy adults receiving amoxicillin treatment.

Ladirat SE, Schoterman MH, Rahaoui H, Mars M, Schuren FH, Gruppen H, Nauta A, Schols HA.

Br J Nutr. 2014 Aug 28;112(4):536-46. doi: 10.1017/S0007114514001135. Epub 2014 Jun 13.


Flux analysis of the human proximal colon using anaerobic digestion model 1.

Motelica-Wagenaar AM, Nauta A, van den Heuvel EG, Kleerebezem R.

Anaerobe. 2014 Aug;28:137-48. doi: 10.1016/j.anaerobe.2014.05.008. Epub 2014 May 28.


Evaluation of polyomavirus BK cellular immune response by an ELISpot assay and relation to viral replication in kidney transplant recipients.

Costa C, Mantovani S, Piceghello A, Di Nauta A, Sinesi F, Sidoti F, Messina M, Cavallo R.

New Microbiol. 2014 Apr;37(2):219-23. Epub 2014 Apr 1.


Epidermal or dermal specific knockout of PHD-2 enhances wound healing and minimizes ischemic injury.

Zimmermann AS, Morrison SD, Hu MS, Li S, Nauta A, Sorkin M, Meyer NP, Walmsley GG, Maan ZN, Chan DA, Gurtner GC, Giaccia AJ, Longaker MT.

PLoS One. 2014 Apr 2;9(4):e93373. doi: 10.1371/journal.pone.0093373. eCollection 2014.


Abstract 151: short hairpin RNA interference therapy for diabetic murine wound closure and hindlimb ischemia.

Paik KJ, Rennert R, Chung MT, Sorkin M, Duscher D, Atashroo D, Chen HH, Morrison SD, Zimmermann A, Nauta A, Ko SH, Tevlin R, Zielins E, Hu MS, McArdle A, Walmsley G, Senarath-Yapa K, Hong WX, Garza RM, Duldulao C, Wearda T, Momeni A, Wu JC, Gurtner GC, Longaker MT, Wan DC.

Plast Reconstr Surg. 2014 Mar;133(3 Suppl):167-8. doi: 10.1097/01.prs.0000444979.14443.08. No abstract available.


Combining chemoinformatics with bioinformatics: in silico prediction of bacterial flavor-forming pathways by a chemical systems biology approach "reverse pathway engineering".

Liu M, Bienfait B, Sacher O, Gasteiger J, Siezen RJ, Nauta A, Geurts JM.

PLoS One. 2014 Jan 8;9(1):e84769. doi: 10.1371/journal.pone.0084769. eCollection 2014.


Bacteriophage orphan DNA methyltransferases: insights from their bacterial origin, function, and occurrence.

Murphy J, Mahony J, Ainsworth S, Nauta A, van Sinderen D.

Appl Environ Microbiol. 2013 Dec;79(24):7547-55. doi: 10.1128/AEM.02229-13. Epub 2013 Oct 11. Review.


Evaluation of Epstein-Barr virus-specific immunologic response in solid organ transplant recipients with an enzyme-linked ImmunoSpot assay.

Rittà M, Costa C, Sinesi F, Sidoti F, Di Nauta A, Mantovani S, Piceghello A, Simeone S, Ricci D, Boffini M, Solidoro P, Baldi S, Segoloni GP, Cavallo R.

Transplant Proc. 2013 Sep;45(7):2754-7. doi: 10.1016/j.transproceed.2013.07.033.


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