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Items: 1 to 20 of 65


Comparative Proteomic Analysis of Cotton Fiber Development and Protein Extraction Method Comparison in Late Stage Fibers.

Mujahid H, Pendarvis K, Reddy JS, Nallamilli BR, Reddy KR, Nanduri B, Peng Z.

Proteomes. 2016 Feb 3;4(1). pii: E7. doi: 10.3390/proteomes4010007.


Proceedings of the 2016 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

Wren JD, Toby I, Hong H, Nanduri B, Kaundal R, Dozmorov MG, Thakkar S.

BMC Bioinformatics. 2016 Oct 6;17(Suppl 13):356. No abstract available.


Use of focused ultrasonication in activity-based profiling of deubiquitinating enzymes in tissue.

Nanduri B, Shack LA, Rai AN, Epperson WB, Baumgartner W, Schmidt TB, Edelmann MJ.

Anal Biochem. 2016 Dec 15;515:9-13. doi: 10.1016/j.ab.2016.09.016. Epub 2016 Sep 20.


HPIDB 2.0: a curated database for host-pathogen interactions.

Ammari MG, Gresham CR, McCarthy FM, Nanduri B.

Database (Oxford). 2016 Jul 3;2016. pii: baw103. doi: 10.1093/database/baw103. Print 2016.


The Effect of Oxygen on Bile Resistance in Listeria monocytogenes.

Wright ML, Pendarvis K, Nanduri B, Edelmann MJ, Jenkins HN, Reddy JS, Wilson JG, Ding X, Broadway PR, Ammari MG, Paul O, Roberts B, Donaldson JR.

J Proteomics Bioinform. 2016 Apr;9(4):107-119. Epub 2016 Apr 5.


Polyamine transporter in Streptococcus pneumoniae is essential for evading early innate immune responses in pneumococcal pneumonia.

Rai AN, Thornton JA, Stokes J, Sunesara I, Swiatlo E, Nanduri B.

Sci Rep. 2016 Jun 1;6:26964. doi: 10.1038/srep26964.


Analysis of differentially expressed proteins in Yersinia enterocolitica-infected HeLa cells.

Alugubelly N, Hercik K, Kibler P, Nanduri B, Edelmann MJ.

Biochim Biophys Acta. 2016 May;1864(5):562-9. doi: 10.1016/j.bbapap.2016.02.004. Epub 2016 Feb 5.


Application of Functional Genomics for Bovine Respiratory Disease Diagnostics.

Rai AN, Epperson WB, Nanduri B.

Bioinform Biol Insights. 2015 Oct 22;9(Suppl 2):13-23. doi: 10.4137/BBI.S30525. eCollection 2015. Review.


Correction: Activity-Based Proteomic Profiling of Deubiquitinating Enzymes in Salmonella-Infected Macrophages Leads to Identification of Putative Function of UCH-L5 in Inflammasome Regulation.

Kummari E, Alugubelly N, Hsu CY, Dong B, Nanduri B, Edelmann MJ.

PLoS One. 2015 Sep 15;10(9):e0138635. doi: 10.1371/journal.pone.0138635. eCollection 2015. No abstract available.


Activity-Based Proteomic Profiling of Deubiquitinating Enzymes in Salmonella-Infected Macrophages Leads to Identification of Putative Function of UCH-L5 in Inflammasome Regulation.

Kummari E, Alugubelly N, Hsu CY, Dong B, Nanduri B, Edelmann MJ.

PLoS One. 2015 Aug 12;10(8):e0135531. doi: 10.1371/journal.pone.0135531. eCollection 2015. Erratum in: PLoS One. 2015;10(9):e0138635.


Systems toxicology identifies mechanistic impacts of 2-amino-4,6-dinitrotoluene (2A-DNT) exposure in Northern Bobwhite.

Gust KA, Nanduri B, Rawat A, Wilbanks MS, Ang CY, Johnson DR, Pendarvis K, Chen X, Quinn MJ Jr, Johnson MS, Burgess SC, Perkins EJ.

BMC Genomics. 2015 Aug 7;16:587. doi: 10.1186/s12864-015-1798-4.


Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project.

Andersson L, Archibald AL, Bottema CD, Brauning R, Burgess SC, Burt DW, Casas E, Cheng HH, Clarke L, Couldrey C, Dalrymple BP, Elsik CG, Foissac S, Giuffra E, Groenen MA, Hayes BJ, Huang LS, Khatib H, Kijas JW, Kim H, Lunney JK, McCarthy FM, McEwan JC, Moore S, Nanduri B, Notredame C, Palti Y, Plastow GS, Reecy JM, Rohrer GA, Sarropoulou E, Schmidt CJ, Silverstein J, Tellam RL, Tixier-Boichard M, Tosser-Klopp G, Tuggle CK, Vilkki J, White SN, Zhao S, Zhou H; FAANG Consortium..

Genome Biol. 2015 Mar 25;16:57. doi: 10.1186/s13059-015-0622-4.


Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm.

Huang X, Jennings SF, Bruce B, Buchan A, Cai L, Chen P, Cramer CL, Guan W, Hilgert UK, Jiang H, Li Z, McClure G, McMullen DF, Nanduri B, Perkins A, Rekepalli B, Salem S, Specker J, Walker K, Wunsch D, Xiong D, Zhang S, Zhang Y, Zhao Z, Moore JH.

BioData Min. 2015 Feb 6;8:7. doi: 10.1186/s13040-015-0037-5. eCollection 2015.


SILAC-based quantitative proteomic analysis of human lung cell response to copper oxide nanoparticles.

Edelmann MJ, Shack LA, Naske CD, Walters KB, Nanduri B.

PLoS One. 2014 Dec 3;9(12):e114390. doi: 10.1371/journal.pone.0114390. eCollection 2014.


Global analysis of lysine acetylation suggests the involvement of protein acetylation in diverse biological processes in rice (Oryza sativa).

Nallamilli BR, Edelmann MJ, Zhong X, Tan F, Mujahid H, Zhang J, Nanduri B, Peng Z.

PLoS One. 2014 Feb 20;9(2):e89283. doi: 10.1371/journal.pone.0089283. eCollection 2014.


Proteomic analysis of cross protection provided between cold and osmotic stress in Listeria monocytogenes.

Pittman JR, Buntyn JO, Posadas G, Nanduri B, Pendarvis K, Donaldson JR.

J Proteome Res. 2014 Apr 4;13(4):1896-904. doi: 10.1021/pr401004a. Epub 2014 Mar 5.


No-boundary thinking in bioinformatics research.

Huang X, Bruce B, Buchan A, Congdon CB, Cramer CL, Jennings SF, Jiang H, Li Z, McClure G, McMullen R, Moore JH, Nanduri B, Peckham J, Perkins A, Polson SW, Rekepalli B, Salem S, Specker J, Wunsch D, Xiong D, Zhang S, Zhao Z.

BioData Min. 2013 Nov 6;6(1):19. doi: 10.1186/1756-0381-6-19.


Ultrasonic incisions produce less inflammatory mediator response during early healing than electrosurgical incisions.

Nanduri B, Pendarvis K, Shack LA, Kumar R, Clymer JW, Korvick DL, Burgess SC.

PLoS One. 2013 Sep 18;8(9):e73032. doi: 10.1371/journal.pone.0073032. eCollection 2013.


Sodium methyldithiocarbamate exerts broad inhibition of cellular signaling and expression of effector molecules of inflammation.

Deng X, Nanduri B, Tan W, Cheng B, Fan R, Pruett SB.

Toxicol Sci. 2013 Dec;136(2):430-42. doi: 10.1093/toxsci/kft196. Epub 2013 Sep 20.


Role of an iron-dependent transcriptional regulator in the pathogenesis and host response to infection with Streptococcus pneumoniae.

Gupta R, Bhatty M, Swiatlo E, Nanduri B.

PLoS One. 2013;8(2):e55157. doi: 10.1371/journal.pone.0055157. Epub 2013 Feb 20.

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