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Items: 1 to 20 of 59


Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms.

Royer LA, Lemon WC, Chhetri RK, Wan Y, Coleman M, Myers EW, Keller PJ.

Nat Biotechnol. 2016 Dec;34(12):1267-1278. doi: 10.1038/nbt.3708.


A platform for brain-wide imaging and reconstruction of individual neurons.

Economo MN, Clack NG, Lavis LD, Gerfen CR, Svoboda K, Myers EW, Chandrashekar J.

Elife. 2016 Jan 20;5:e10566. doi: 10.7554/eLife.10566.


Automated detection and quantification of single RNAs at cellular resolution in zebrafish embryos.

Stapel LC, Lombardot B, Broaddus C, Kainmueller D, Jug F, Myers EW, Vastenhouw NL.

Development. 2016 Feb 1;143(3):540-6. doi: 10.1242/dev.128918.


A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.

Patel A, Lee HO, Jawerth L, Maharana S, Jahnel M, Hein MY, Stoynov S, Mahamid J, Saha S, Franzmann TM, Pozniakovski A, Poser I, Maghelli N, Royer LA, Weigert M, Myers EW, Grill S, Drechsel D, Hyman AA, Alberti S.

Cell. 2015 Aug 27;162(5):1066-77. doi: 10.1016/j.cell.2015.07.047.


BlastNeuron for Automated Comparison, Retrieval and Clustering of 3D Neuron Morphologies.

Wan Y, Long F, Qu L, Xiao H, Hawrylycz M, Myers EW, Peng H.

Neuroinformatics. 2015 Oct;13(4):487-99. doi: 10.1007/s12021-015-9272-7.


ClearVolume: open-source live 3D visualization for light-sheet microscopy.

Royer LA, Weigert M, Günther U, Maghelli N, Jug F, Sbalzarini IF, Myers EW.

Nat Methods. 2015 Jun;12(6):480-1. doi: 10.1038/nmeth.3372. No abstract available.


Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data.

Amat F, Lemon W, Mossing DP, McDole K, Wan Y, Branson K, Myers EW, Keller PJ.

Nat Methods. 2014 Sep;11(9):951-8. doi: 10.1038/nmeth.3036.


Thalamocortical input onto layer 5 pyramidal neurons measured using quantitative large-scale array tomography.

Rah JC, Bas E, Colonell J, Mishchenko Y, Karsh B, Fetter RD, Myers EW, Chklovskii DB, Svoboda K, Harris TD, Isaac JT.

Front Neural Circuits. 2013 Nov 12;7:177. doi: 10.3389/fncir.2013.00177.


Unsupervised segmentation of noisy electron microscopy images using salient watersheds and region merging.

Navlakha S, Ahammad P, Myers EW.

BMC Bioinformatics. 2013 Oct 4;14:294. doi: 10.1186/1471-2105-14-294.


The mechanical variables underlying object localization along the axis of the whisker.

Pammer L, O'Connor DH, Hires SA, Clack NG, Huber D, Myers EW, Svoboda K.

J Neurosci. 2013 Apr 17;33(16):6726-41. doi: 10.1523/JNEUROSCI.4316-12.2013.


Fast and robust optical flow for time-lapse microscopy using super-voxels.

Amat F, Myers EW, Keller PJ.

Bioinformatics. 2013 Feb 1;29(3):373-80. doi: 10.1093/bioinformatics/bts706.


A GAL4-driver line resource for Drosophila neurobiology.

Jenett A, Rubin GM, Ngo TT, Shepherd D, Murphy C, Dionne H, Pfeiffer BD, Cavallaro A, Hall D, Jeter J, Iyer N, Fetter D, Hausenfluck JH, Peng H, Trautman ET, Svirskas RR, Myers EW, Iwinski ZR, Aso Y, DePasquale GM, Enos A, Hulamm P, Lam SC, Li HH, Laverty TR, Long F, Qu L, Murphy SD, Rokicki K, Safford T, Shaw K, Simpson JH, Sowell A, Tae S, Yu Y, Zugates CT.

Cell Rep. 2012 Oct 25;2(4):991-1001. doi: 10.1016/j.celrep.2012.09.011.


Automated tracking of whiskers in videos of head fixed rodents.

Clack NG, O'Connor DH, Huber D, Petreanu L, Hires A, Peron S, Svoboda K, Myers EW.

PLoS Comput Biol. 2012;8(7):e1002591. doi: 10.1371/journal.pcbi.1002591.


BrainAligner: 3D registration atlases of Drosophila brains.

Peng H, Chung P, Long F, Qu L, Jenett A, Seeds AM, Myers EW, Simpson JH.

Nat Methods. 2011 Jun;8(6):493-500. doi: 10.1038/nmeth.1602.


Automated tracking and analysis of centrosomes in early Caenorhabditis elegans embryos.

Jaensch S, Decker M, Hyman AA, Myers EW.

Bioinformatics. 2010 Jun 15;26(12):i13-20. doi: 10.1093/bioinformatics/btq190.


V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets.

Peng H, Ruan Z, Long F, Simpson JH, Myers EW.

Nat Biotechnol. 2010 Apr;28(4):348-53. doi: 10.1038/nbt.1612.


Vibrissa-based object localization in head-fixed mice.

O'Connor DH, Clack NG, Huber D, Komiyama T, Myers EW, Svoboda K.

J Neurosci. 2010 Feb 3;30(5):1947-67. doi: 10.1523/JNEUROSCI.3762-09.2010.


Analysis of cell fate from single-cell gene expression profiles in C. elegans.

Liu X, Long F, Peng H, Aerni SJ, Jiang M, Sánchez-Blanco A, Murray JI, Preston E, Mericle B, Batzoglou S, Myers EW, Kim SK.

Cell. 2009 Oct 30;139(3):623-33. doi: 10.1016/j.cell.2009.08.044.


Digestion in the common marmoset (Callithrix jacchus), a gummivore-frugivore.

Power ML, Myers EW.

Am J Primatol. 2009 Dec;71(12):957-63. doi: 10.1002/ajp.20737.


Segmentation of center brains and optic lobes in 3D confocal images of adult fruit fly brains.

Lam SC, Ruan Z, Zhao T, Long F, Jenett A, Simpson J, Myers EW, Peng H.

Methods. 2010 Feb;50(2):63-9. doi: 10.1016/j.ymeth.2009.08.004.

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