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Items: 1 to 20 of 63

1.

Advantages of an Improved Rhesus Macaque Genome for Evolutionary Analyses.

Gradnigo JS, Majumdar A, Norgren RB Jr, Moriyama EN.

PLoS One. 2016 Dec 2;11(12):e0167376. doi: 10.1371/journal.pone.0167376. eCollection 2016.

2.

Whole genomic sequence analysis of Bacillus infantis: defining the genetic blueprint of strain NRRL B-14911, an emerging cardiopathogenic microbe.

Massilamany C, Mohammed A, Loy JD, Purvis T, Krishnan B, Basavalingappa RH, Kelley CM, Guda C, Barletta RG, Moriyama EN, Smith TP, Reddy J.

BMC Genomics. 2016 Aug 22;17 Suppl 7:511. doi: 10.1186/s12864-016-2900-2.

3.

Genome Sequence of Streptomyces aureofaciens ATCC Strain 10762.

Gradnigo JS, Somerville GA, Huether MJ, Kemmy RJ, Johnson CM, Oliver MG, Moriyama EN.

Genome Announc. 2016 Jun 23;4(3). pii: e00615-16. doi: 10.1128/genomeA.00615-16.

4.

Molecular Evolution and Functional Divergence of Trace Amine-Associated Receptors.

Eyun SI, Moriyama H, Hoffmann FG, Moriyama EN.

PLoS One. 2016 Mar 10;11(3):e0151023. doi: 10.1371/journal.pone.0151023. eCollection 2016.

5.

Carbon dioxide receptor genes and their expression profile in Diabrotica virgifera virgifera.

Rodrigues TB, Moriyama EN, Wang H, Khajuria C, Siegfried BD.

BMC Res Notes. 2016 Jan 8;9:18. doi: 10.1186/s13104-015-1794-4.

6.

Transcriptional analysis of susceptible and resistant European corn borer strains and their response to Cry1F protoxin.

Nanoth Vellichirammal N, Wang H, Eyun SI, Moriyama EN, Coates BS, Miller NJ, Siegfried BD.

BMC Genomics. 2015 Jul 29;16:558. doi: 10.1186/s12864-015-1751-6.

7.

Identification of AGO3-associated miRNAs and computational prediction of their targets in the green alga Chlamydomonas reinhardtii.

Voshall A, Kim EJ, Ma X, Moriyama EN, Cerutti H.

Genetics. 2015 May;200(1):105-21. doi: 10.1534/genetics.115.174797. Epub 2015 Mar 13.

8.

De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences.

Maudhoo MD, Ren D, Gradnigo JS, Gibbs RM, Lubker AC, Moriyama EN, French JA, Norgren RB Jr.

Gigascience. 2014 Sep 19;3:14. doi: 10.1186/2047-217X-3-14. eCollection 2014.

9.

Molecular evolution of glycoside hydrolase genes in the Western corn rootworm (Diabrotica virgifera virgifera).

Eyun SI, Wang H, Pauchet Y, Ffrench-Constant RH, Benson AK, Valencia-Jiménez A, Moriyama EN, Siegfried BD.

PLoS One. 2014 Apr 9;9(4):e94052. doi: 10.1371/journal.pone.0094052. eCollection 2014. Erratum in: PLoS One. 2014;9(7):e102818.

10.

Comparative studies of differential gene calling using RNA-Seq data.

Zheng X, Moriyama EN.

BMC Bioinformatics. 2013;14 Suppl 13:S7. doi: 10.1186/1471-2105-14-S13-S7. Epub 2013 Oct 1.

11.

Reductive evolution and the loss of PDC/PAS domains from the genus Staphylococcus.

Shah N, Gaupp R, Moriyama H, Eskridge KM, Moriyama EN, Somerville GA.

BMC Genomics. 2013 Jul 31;14:524. doi: 10.1186/1471-2164-14-524.

12.

Evolution of a large, conserved, and syntenic gene family in insects.

Shah N, Dorer DR, Moriyama EN, Christensen AC.

G3 (Bethesda). 2012 Feb;2(2):313-9. doi: 10.1534/g3.111.001412. Epub 2012 Feb 1.

13.

Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis.

Klopffleisch K, Phan N, Augustin K, Bayne RS, Booker KS, Botella JR, Carpita NC, Carr T, Chen JG, Cooke TR, Frick-Cheng A, Friedman EJ, Fulk B, Hahn MG, Jiang K, Jorda L, Kruppe L, Liu C, Lorek J, McCann MC, Molina A, Moriyama EN, Mukhtar MS, Mudgil Y, Pattathil S, Schwarz J, Seta S, Tan M, Temp U, Trusov Y, Urano D, Welter B, Yang J, Panstruga R, Uhrig JF, Jones AM.

Mol Syst Biol. 2011 Sep 27;7:532. doi: 10.1038/msb.2011.66.

14.

SuiteMSA: visual tools for multiple sequence alignment comparison and molecular sequence simulation.

Anderson CL, Strope CL, Moriyama EN.

BMC Bioinformatics. 2011 May 21;12:184. doi: 10.1186/1471-2105-12-184.

15.

Molecular evolution of urea amidolyase and urea carboxylase in fungi.

Strope PK, Nickerson KW, Harris SD, Moriyama EN.

BMC Evol Biol. 2011 Mar 29;11:80. doi: 10.1186/1471-2148-11-80.

16.

Evolution of the Kdo2-lipid A biosynthesis in bacteria.

Opiyo SO, Pardy RL, Moriyama H, Moriyama EN.

BMC Evol Biol. 2010 Nov 24;10:362. doi: 10.1186/1471-2148-10-362.

17.

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors.

Benson AK, Kelly SA, Legge R, Ma F, Low SJ, Kim J, Zhang M, Oh PL, Nehrenberg D, Hua K, Kachman SD, Moriyama EN, Walter J, Peterson DA, Pomp D.

Proc Natl Acad Sci U S A. 2010 Nov 2;107(44):18933-8. doi: 10.1073/pnas.1007028107. Epub 2010 Oct 11.

18.

Molecular evolutionary analysis of seminal receptacle sperm storage organ genes of Drosophila melanogaster.

Prokupek AM, Eyun SI, Ko L, Moriyama EN, Harshman LG.

J Evol Biol. 2010 Jul;23(7):1386-98. doi: 10.1111/j.1420-9101.2010.01998.x. Epub 2010 May 24.

19.

Mining Cytochrome b561 proteins from plant genomes.

Opiyo SO, Moriyama EN.

Int J Bioinform Res Appl. 2010;6(2):209-21.

20.

Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution.

Oh PL, Benson AK, Peterson DA, Patil PB, Moriyama EN, Roos S, Walter J.

ISME J. 2010 Mar;4(3):377-87. doi: 10.1038/ismej.2009.123. Epub 2009 Nov 19.

PMID:
19924154

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