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Items: 1 to 20 of 23

1.

Genome-wide quantification of rare somatic mutations in normal human tissues using massively parallel sequencing.

Hoang ML, Kinde I, Tomasetti C, McMahon KW, Rosenquist TA, Grollman AP, Kinzler KW, Vogelstein B, Papadopoulos N.

Proc Natl Acad Sci U S A. 2016 Aug 30;113(35):9846-51. doi: 10.1073/pnas.1607794113. Epub 2016 Aug 15.

2.

Whole Genome Sequencing Defines the Genetic Heterogeneity of Familial Pancreatic Cancer.

Roberts NJ, Norris AL, Petersen GM, Bondy ML, Brand R, Gallinger S, Kurtz RC, Olson SH, Rustgi AK, Schwartz AG, Stoffel E, Syngal S, Zogopoulos G, Ali SZ, Axilbund J, Chaffee KG, Chen YC, Cote ML, Childs EJ, Douville C, Goes FS, Herman JM, Iacobuzio-Donahue C, Kramer M, Makohon-Moore A, McCombie RW, McMahon KW, Niknafs N, Parla J, Pirooznia M, Potash JB, Rhim AD, Smith AL, Wang Y, Wolfgang CL, Wood LD, Zandi PP, Goggins M, Karchin R, Eshleman JR, Papadopoulos N, Kinzler KW, Vogelstein B, Hruban RH, Klein AP.

Cancer Discov. 2016 Feb;6(2):166-75. doi: 10.1158/2159-8290.CD-15-0402. Epub 2015 Dec 9.

3.

Millennial-scale plankton regime shifts in the subtropical North Pacific Ocean.

McMahon KW, McCarthy MD, Sherwood OA, Larsen T, Guilderson TP.

Science. 2015 Dec 18;350(6267):1530-3. doi: 10.1126/science.aaa9942. Epub 2015 Nov 26.

4.

Tracing carbon flow through coral reef food webs using a compound-specific stable isotope approach.

McMahon KW, Thorrold SR, Houghton LA, Berumen ML.

Oecologia. 2016 Mar;180(3):809-21. doi: 10.1007/s00442-015-3475-3. Epub 2015 Nov 21.

PMID:
26590916
5.

Detection of tumor-derived DNA in cerebrospinal fluid of patients with primary tumors of the brain and spinal cord.

Wang Y, Springer S, Zhang M, McMahon KW, Kinde I, Dobbyn L, Ptak J, Brem H, Chaichana K, Gallia GL, Gokaslan ZL, Groves ML, Jallo GI, Lim M, Olivi A, Quinones-Hinojosa A, Rigamonti D, Riggins GJ, Sciubba DM, Weingart JD, Wolinsky JP, Ye X, Oba-Shinjo SM, Marie SK, Holdhoff M, Agrawal N, Diaz LA Jr, Papadopoulos N, Kinzler KW, Vogelstein B, Bettegowda C.

Proc Natl Acad Sci U S A. 2015 Aug 4;112(31):9704-9. doi: 10.1073/pnas.1511694112. Epub 2015 Jul 20.

6.

Carbon and nitrogen isotope fractionation of amino acids in an avian marine predator, the gentoo penguin (Pygoscelis papua).

McMahon KW, Polito MJ, Abel S, McCarthy MD, Thorrold SR.

Ecol Evol. 2015 Mar;5(6):1278-90. doi: 10.1002/ece3.1437. Epub 2015 Feb 25.

7.

A comparison of cell mediators and serum cytokines transcript expression between male and female mice infected with Mycobacterium avium subspecies paratuberculosis and/or consuming probiotics.

Karunasena E, McMahon KW, Kurkure PC, Brashears MM.

Pathog Dis. 2014 Nov;72(2):104-10. doi: 10.1111/2049-632X.12193. Epub 2014 Jul 9.

PMID:
25044984
8.

Response of the hepatic transcriptome to aflatoxin B1 in domestic turkey (Meleagris gallopavo).

Monson MS, Settlage RE, McMahon KW, Mendoza KM, Rawal S, El-Nezami HS, Coulombe RA, Reed KM.

PLoS One. 2014 Jun 30;9(6):e100930. doi: 10.1371/journal.pone.0100930. eCollection 2014.

9.

Host responses to the pathogen Mycobacterium avium subsp. paratuberculosis and beneficial microbes exhibit host sex specificity.

Karunasena E, McMahon KW, Chang D, Brashears MM.

Appl Environ Microbiol. 2014 Aug;80(15):4481-90.

10.

ReviSTER: an automated pipeline to revise misaligned reads to simple tandem repeats.

Tae H, McMahon KW, Settlage RE, Bavarva JH, Garner HR.

Bioinformatics. 2013 Jul 15;29(14):1734-41. doi: 10.1093/bioinformatics/btt277. Epub 2013 May 15.

11.

Effects of the probiotic Lactobacillus animalis in murine Mycobacterium avium subspecies paratuberculosis infection.

Karunasena E, Kurkure PC, Lackey RD, McMahon KW, Kiernan EP, Graham S, Alabady MS, Campos DL, Tatum OL, Brashears MM.

BMC Microbiol. 2013 Jan 16;13:8. doi: 10.1186/1471-2180-13-8.

12.

Linking habitat mosaics and connectivity in a coral reef seascape.

McMahon KW, Berumen ML, Thorrold SR.

Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):15372-6. Epub 2012 Sep 4.

13.

Tissue-specific mechanisms of alternative polyadenylation: testis, brain, and beyond.

MacDonald CC, McMahon KW.

Wiley Interdiscip Rev RNA. 2010 Nov-Dec;1(3):494-501. doi: 10.1002/wrna.29. Review.

PMID:
21956945
14.

FASTA barcodes: a simple method for the identification of yeast ORF deletions.

McMahon KW, Manukyan A, Dungrawala H, Montgomery M, Nordstrom B, Wright J, Abraham L, Schneider BL.

Yeast. 2011 Sep;28(9):661-71. doi: 10.1002/yea.1894. Epub 2011 Aug 1.

15.

Comparison of Phenotypic and Genotypic Methods Used for the Species Identification of Lactobacillus NP51 and Development of a Strain-Specific PCR Assay.

Randhawa S, Brashears MM, McMahon KW, Fokar M, Karunasena E.

Probiotics Antimicrob Proteins. 2010 Dec;2(4):274-83. doi: 10.1007/s12602-010-9057-0.

PMID:
26781323
16.

Carbon isotope fractionation of amino acids in fish muscle reflects biosynthesis and isotopic routing from dietary protein.

McMahon KW, Fogel ML, Elsdon TS, Thorrold SR.

J Anim Ecol. 2010 Sep;79(5):1132-41. doi: 10.1111/j.1365-2656.2010.01722.x. Epub 2010 Jul 9.

PMID:
20629794
17.

Transequatorial migrations by basking sharks in the western Atlantic Ocean.

Skomal GB, Zeeman SI, Chisholm JH, Summers EL, Walsh HJ, McMahon KW, Thorrold SR.

Curr Biol. 2009 Jun 23;19(12):1019-22. doi: 10.1016/j.cub.2009.04.019. Epub 2009 May 7.

18.

Bivalves as indicators of environmental variation and potential anthropogenic impacts in the southern Barents Sea.

Carroll ML, Johnson BJ, Henkes GA, McMahon KW, Voronkov A, Ambrose WG Jr, Denisenko SG.

Mar Pollut Bull. 2009;59(4-7):193-206. doi: 10.1016/j.marpolbul.2009.02.022. Epub 2009 Apr 25.

19.

Differences in polyadenylation site choice between somatic and male germ cells.

McMahon KW, Hirsch BA, MacDonald CC.

BMC Mol Biol. 2006 Oct 12;7:35.

20.

The flowers that bloom in the spring: RNA processing and seasonal flowering.

MacDonald CC, McMahon KW.

Cell. 2003 Jun 13;113(6):671-2. Review.

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