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Response to R. Colebunders: Helminth infections in Nodding syndrome.

Spencer PS, Mazumder R, Palmer VS; Oregon-Uganda Research Team on Nodding Syndrome..

J Neurol Sci. 2016 Oct 13. pii: S0022-510X(16)30639-6. doi: 10.1016/j.jns.2016.10.010. No abstract available.


Environmental, dietary and case-control study of Nodding Syndrome in Uganda: A post-measles brain disorder triggered by malnutrition?

Spencer PS, Mazumder R, Palmer VS, Lasarev MR, Stadnik RC, King P, Kabahenda M, Kitara DL, Stadler D, McArdle B, Tumwine JK; other Members of the Oregon-Uganda Nodding Syndrome Research Team..

J Neurol Sci. 2016 Oct 15;369:191-203. doi: 10.1016/j.jns.2016.08.023.


In vivo quantification of myocardial stiffness in hypertensive porcine hearts using MR elastography.

Mazumder R, Schroeder S, Mo X, Clymer BD, White RD, Kolipaka A.

J Magn Reson Imaging. 2016 Aug 26. doi: 10.1002/jmri.25423.


In vivo magnetic resonance elastography to estimate left ventricular stiffness in a myocardial infarction induced porcine model.

Mazumder R, Schroeder S, Mo X, Litsky AS, Clymer BD, White RD, Kolipaka A.

J Magn Reson Imaging. 2016 Aug 17. doi: 10.1002/jmri.25432.


Atypical case of central-variant posterior reversible encephalopathy syndrome.

Malhotra K, Mazumder R, Blanco MB, Liebeskind DS.

Acta Neurol Belg. 2016 Aug 6. No abstract available.


Computational clustering for viral reference proteomes.

Chen C, Huang H, Mazumder R, Natale DA, McGarvey PB, Zhang J, Polson SW, Wang Y, Wu CH; UniProt Consortium..

Bioinformatics. 2016 Jul 1;32(13):2041-3. doi: 10.1093/bioinformatics/btw110.


DiMeX: A Text Mining System for Mutation-Disease Association Extraction.

Mahmood AS, Wu TJ, Mazumder R, Vijay-Shanker K.

PLoS One. 2016 Apr 13;11(4):e0152725. doi: 10.1371/journal.pone.0152725.


Pubcast and Genecast: Browsing and explor-ing publications and associated curated con-tent in biology through mobile devices.

Goldweber S, Theodore J, John Torcivia-Rodriguez J, Simonyan V, Mazumder R.

IEEE/ACM Trans Comput Biol Bioinform. 2016 Mar 23.


Diffusion Tensor Imaging of Healthy and Infarcted Porcine Hearts: Study on the Impact of Formalin Fixation.

Mazumder R, Choi S, Clymer BD, White RD, Kolipaka A.

J Med Imaging Radiat Sci. 2016 Mar;47(1):74-85.


High-performance integrated virtual environment (HIVE): a robust infrastructure for next-generation sequence data analysis.

Simonyan V, Chumakov K, Dingerdissen H, Faison W, Goldweber S, Golikov A, Gulzar N, Karagiannis K, Vinh Nguyen Lam P, Maudru T, Muravitskaja O, Osipova E, Pan Y, Pschenichnov A, Rostovtsev A, Santana-Quintero L, Smith K, Thompson EE, Tkachenko V, Torcivia-Rodriguez J, Voskanian A, Wan Q, Wang J, Wu TJ, Wilson C, Mazumder R.

Database (Oxford). 2016;2016. pii: baw022. doi: 10.1093/database/baw022.


Adaptive anisotropic gaussian filtering to reduce acquisition time in cardiac diffusion tensor imaging.

Mazumder R, Clymer BD, Mo X, White RD, Kolipaka A.

Int J Cardiovasc Imaging. 2016 Jun;32(6):921-34. doi: 10.1007/s10554-016-0848-6.


Impact of germline and somatic missense variations on drug binding sites.

Yan C, Pattabiraman N, Goecks J, Lam P, Nayak A, Pan Y, Torcivia-Rodriguez J, Voskanian A, Wan Q, Mazumder R.

Pharmacogenomics J. 2016 Jan 26. doi: 10.1038/tpj.2015.97.


Fear of Falling Is Associated with Recurrent Falls in People with Multiple Sclerosis: A Longitudinal Cohort Study.

Mazumder R, Lambert WE, Nguyen T, Bourdette DN, Cameron MH.

Int J MS Care. 2015 Jul-Aug;17(4):164-70. doi: 10.7224/1537-2073.2014-042.


Captopril in congenital chloride diarrhoea: a case study.

Bin Islam S, Mazumder RN, Chisti MJ, Sharifuzzaman, Sahreen L, Ahmed T, Haque Alam N.

J Health Popul Nutr. 2015 Mar;33(1):214-9.


Probable toxic cause for suspected lychee-linked viral encephalitis.

Spencer PS, Palmer VS, Mazumder R.

Emerg Infect Dis. 2015 May;21(5):904-5. doi: 10.3201/eid2105.141650. No abstract available.


Generating a focused view of disease ontology cancer terms for pan-cancer data integration and analysis.

Wu TJ, Schriml LM, Chen QR, Colbert M, Crichton DJ, Finney R, Hu Y, Kibbe WA, Kincaid H, Meerzaman D, Mitraka E, Pan Y, Smith KM, Srivastava S, Ward S, Yan C, Mazumder R.

Database (Oxford). 2015;2015:bav032. doi: 10.1093/database/bav032.


BioXpress: an integrated RNA-seq-derived gene expression database for pan-cancer analysis.

Wan Q, Dingerdissen H, Fan Y, Gulzar N, Pan Y, Wu TJ, Yan C, Zhang H, Mazumder R.

Database (Oxford). 2015;2015. pii: bav019. doi: 10.1093/database/bav019.


Germ line variants of human N-methylpurine DNA glycosylase show impaired DNA repair activity and facilitate 1,N6-ethenoadenine-induced mutations.

Adhikari S, Chetram MA, Woodrick J, Mitra PS, Manthena PV, Khatkar P, Dakshanamurthy S, Dixon M, Karmahapatra SK, Nuthalapati NK, Gupta S, Narasimhan G, Mazumder R, Loffredo CA, √úren A, Roy R.

J Biol Chem. 2015 Feb 20;290(8):4966-80. doi: 10.1074/jbc.M114.627000.


Census-based rapid and accurate metagenome taxonomic profiling.

Shamsaddini A, Pan Y, Johnson WE, Krampis K, Shcheglovitova M, Simonyan V, Zanne A, Mazumder R.

BMC Genomics. 2014 Oct 21;15:918. doi: 10.1186/1471-2164-15-918.


High-Performance Integrated Virtual Environment (HIVE) Tools and Applications for Big Data Analysis.

Simonyan V, Mazumder R.

Genes (Basel). 2014 Sep 30;5(4):957-81. doi: 10.3390/genes5040957.

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