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Items: 19

1.

Inferring node dates from tip dates in fossil Canidae: the importance of tree priors.

Matzke NJ, Wright A.

Biol Lett. 2016 Aug;12(8). pii: 20160328. doi: 10.1098/rsbl.2016.0328.

PMID:
27512133
2.

Topology, divergence dates, and macroevolutionary inferences vary between different tip-dating approaches applied to fossil theropods (Dinosauria).

Bapst DW, Wright AM, Matzke NJ, Lloyd GT.

Biol Lett. 2016 Jul;12(7). pii: 20160237. doi: 10.1098/rsbl.2016.0237.

PMID:
27405380
3.

Crown group Oxyphotobacteria postdate the rise of oxygen.

Shih PM, Hemp J, Ward LM, Matzke NJ, Fischer WW.

Geobiology. 2016 Jul 8. doi: 10.1111/gbi.12200. [Epub ahead of print]

PMID:
27392323
4.

Spatiotemporal Diversification of the True Frogs (Genus Rana): A Historical Framework for a Widely Studied Group of Model Organisms.

Yuan ZY, Zhou WW, Chen X, Poyarkov NA Jr, Chen HM, Jang-Liaw NH, Chou WH, Matzke NJ, Iizuka K, Min MS, Kuzmin SL, Zhang YP, Cannatella DC, Hillis DM, Che J.

Syst Biol. 2016 Sep;65(5):824-42. doi: 10.1093/sysbio/syw055.

PMID:
27288482
5.

The evolution of antievolution policies after Kitzmiller versus Dover.

Matzke NJ.

Science. 2016 Jan 1;351(6268):28-30. doi: 10.1126/science.aad4057. No abstract available.

PMID:
26678877
6.

Bayesian analysis of a morphological supermatrix sheds light on controversial fossil hominin relationships.

Dembo M, Matzke NJ, Mooers AØ, Collard M.

Proc Biol Sci. 2015 Aug 7;282(1812):20150943. doi: 10.1098/rspb.2015.0943.

7.
8.

Climate refugia: joint inference from fossil records, species distribution models and phylogeography.

Gavin DG, Fitzpatrick MC, Gugger PF, Heath KD, Rodríguez-Sánchez F, Dobrowski SZ, Hampe A, Hu FS, Ashcroft MB, Bartlein PJ, Blois JL, Carstens BC, Davis EB, de Lafontaine G, Edwards ME, Fernandez M, Henne PD, Herring EM, Holden ZA, Kong WS, Liu J, Magri D, Matzke NJ, McGlone MS, Saltré F, Stigall AL, Tsai YH, Williams JW.

New Phytol. 2014 Oct;204(1):37-54. doi: 10.1111/nph.12929. Review.

9.

Bayesian analysis of congruence of core genes in Prochlorococcus and Synechococcus and implications on horizontal gene transfer.

Matzke NJ, Shih PM, Kerfeld CA.

PLoS One. 2014 Jan 21;9(1):e85103. doi: 10.1371/journal.pone.0085103.

10.

Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae.

Alexandrou MA, Swartz BA, Matzke NJ, Oakley TH.

Mol Phylogenet Evol. 2013 Dec;69(3):514-23. doi: 10.1016/j.ympev.2013.07.026.

PMID:
23933489
11.

Primary endosymbiosis events date to the later Proterozoic with cross-calibrated phylogenetic dating of duplicated ATPase proteins.

Shih PM, Matzke NJ.

Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12355-60. doi: 10.1073/pnas.1305813110.

12.

Bayesian analysis of biogeography when the number of areas is large.

Landis MJ, Matzke NJ, Moore BR, Huelsenbeck JP.

Syst Biol. 2013 Nov;62(6):789-804. doi: 10.1093/sysbio/syt040.

13.

The incidence and implications of clouds for cloud forest plant water relations.

Goldsmith GR, Matzke NJ, Dawson TE.

Ecol Lett. 2013 Mar;16(3):307-14. doi: 10.1111/ele.12039.

PMID:
23216898
14.

Treating fossils as terminal taxa in divergence time estimation reveals ancient vicariance patterns in the palpimanoid spiders.

Wood HM, Matzke NJ, Gillespie RG, Griswold CE.

Syst Biol. 2013 Mar;62(2):264-84. doi: 10.1093/sysbio/sys092.

PMID:
23192838
15.

Evolution of patterns on Conus shells.

Gong Z, Matzke NJ, Ermentrout B, Song D, Vendetti JE, Slatkin M, Oster G.

Proc Natl Acad Sci U S A. 2012 Jan 31;109(5):E234-41. doi: 10.1073/pnas.1119859109.

16.

Whole mitochondrial genome sequencing of domestic horses reveals incorporation of extensive wild horse diversity during domestication.

Lippold S, Matzke NJ, Reissmann M, Hofreiter M.

BMC Evol Biol. 2011 Nov 14;11:328. doi: 10.1186/1471-2148-11-328.

17.

Biological design in science classrooms.

Scott EC, Matzke NJ.

Proc Natl Acad Sci U S A. 2007 May 15;104 Suppl 1:8669-76.

18.

From The Origin of Species to the origin of bacterial flagella.

Pallen MJ, Matzke NJ.

Nat Rev Microbiol. 2006 Oct;4(10):784-90.

PMID:
16953248
19.

Immunology in the spotlight at the Dover 'Intelligent Design' trial.

Bottaro A, Inlay MA, Matzke NJ.

Nat Immunol. 2006 May;7(5):433-5. No abstract available.

PMID:
16622425
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