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Items: 1 to 20 of 67

1.

A Comparative Analysis of Genetic Ancestry and Admixture in the Colombian Populations of Chocó and Medellín.

Conley AB, Rishishwar L, Norris ET, Valderrama-Aguirre A, Mariño-Ramírez L, Medina-Rivas MA, Jordan IK.

G3 (Bethesda). 2017 Oct 5;7(10):3435-3447. doi: 10.1534/g3.117.1118.

2.

De novo transcriptome assembly of loggerhead sea turtle nesting of the Colombian Caribbean.

Hernández-Fernández J, Pinzón A, Mariño-Ramírez L.

Genom Data. 2017 Jun 8;13:18-20. doi: 10.1016/j.gdata.2017.06.005. eCollection 2017 Sep.

3.

Workflow and web application for annotating NCBI BioProject transcriptome data.

Vera Alvarez R, Medeiros Vidal N, Garzón-Martínez GA, Barrero LS, Landsman D, Mariño-Ramírez L.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax008.

4.

Population and clinical genetics of human transposable elements in the (post) genomic era.

Rishishwar L, Wang L, Clayton EA, Mariño-Ramírez L, McDonald JF, Jordan IK.

Mob Genet Elements. 2017 Jan 11;7(1):1-20. doi: 10.1080/2159256X.2017.1280116. eCollection 2017. Review.

5.

Whole-Genome Sequences of 26 Vibrio cholerae Isolates.

Watve SS, Chande AT, Rishishwar L, Mariño-Ramírez L, Jordan IK, Hammer BK.

Genome Announc. 2016 Dec 22;4(6). pii: e01396-16. doi: 10.1128/genomeA.01396-16.

6.

Human population-specific gene expression and transcriptional network modification with polymorphic transposable elements.

Wang L, Rishishwar L, Mariño-Ramírez L, Jordan IK.

Nucleic Acids Res. 2017 Mar 17;45(5):2318-2328. doi: 10.1093/nar/gkw1286.

7.

Most of the tight positional conservation of transcription factor binding sites near the transcription start site reflects their co-localization within regulatory modules.

Acevedo-Luna N, Mariño-Ramírez L, Halbert A, Hansen U, Landsman D, Spouge JL.

BMC Bioinformatics. 2016 Nov 21;17(1):479.

8.

Chocó, Colombia: a hotspot of human biodiversity.

Medina-Rivas MA, Norris ET, Rishishwar L, Conley AB, Medrano-Trochez C, Valderrama-Aguirre A, Vannberg FO, Mariño-Ramírez L, Jordan IK.

Rev Biodivers Neotrop. 2016 Jan-Jun;6(1):45-54.

9.

Benchmarking computational tools for polymorphic transposable element detection.

Rishishwar L, Mariño-Ramírez L, Jordan IK.

Brief Bioinform. 2016 Aug 14. pii: bbw072. [Epub ahead of print]

PMID:
27524380
10.

Dataset of Arabidopsis plants that overexpress FT driven by a meristem-specific KNAT1 promoter.

Duplat-Bermúdez L, Ruiz-Medrano R, Landsman D, Mariño-Ramírez L, Xoconostle-Cázares B.

Data Brief. 2016 Jun 8;8:520-8. doi: 10.1016/j.dib.2016.06.002. eCollection 2016 Sep.

11.

Transcriptomic analysis of Arabidopsis overexpressing flowering locus T driven by a meristem-specific promoter that induces early flowering.

Duplat-Bermúdez L, Ruiz-Medrano R, Landsman D, Mariño-Ramírez L, Xoconostle-Cázares B.

Gene. 2016 Aug 10;587(2):120-31. doi: 10.1016/j.gene.2016.04.060. Epub 2016 May 3.

12.

Genome Sequence of the Banana Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens PS006.

Gamez RM, Rodríguez F, Ramírez S, Gómez Y, Agarwala R, Landsman D, Mariño-Ramírez L.

Genome Announc. 2016 May 5;4(3). pii: e00329-16. doi: 10.1128/genomeA.00329-16.

13.

HistoneDB 2.0: a histone database with variants--an integrated resource to explore histones and their variants.

Draizen EJ, Shaytan AK, Mariño-Ramírez L, Talbert PB, Landsman D, Panchenko AR.

Database (Oxford). 2016 Mar 17;2016. pii: baw014. doi: 10.1093/database/baw014. Print 2016.

14.

Whole-Genome Sequences of Two Campylobacter coli Isolates from the Antimicrobial Resistance Monitoring Program in Colombia.

Bernal JF, Donado-Godoy P, Valencia MF, León M, Gómez Y, Rodríguez F, Agarwala R, Landsman D, Mariño-Ramírez L.

Genome Announc. 2016 Mar 17;4(2). pii: e00131-16. doi: 10.1128/genomeA.00131-16.

15.

Whole-Genome Sequence of Multidrug-Resistant Campylobacter coli Strain COL B1-266, Isolated from the Colombian Poultry Chain.

Bernal JF, Donado-Godoy P, Arévalo A, Duarte C, Realpe ME, Díaz PL, Gómez Y, Rodríguez F, Agarwala R, Landsman D, Mariño-Ramírez L.

Genome Announc. 2016 Mar 17;4(2). pii: e00130-16. doi: 10.1128/genomeA.00130-16.

16.

Genome Sequence of the Banana Plant Growth-Promoting Rhizobacterium Bacillus amyloliquefaciens BS006.

Gamez RM, Rodríguez F, Bernal JF, Agarwala R, Landsman D, Mariño-Ramírez L.

Genome Announc. 2015 Nov 25;3(6). pii: e01391-15. doi: 10.1128/genomeA.01391-15.

17.

Genetic diversity and population structure in Physalis peruviana and related taxa based on InDels and SNPs derived from COSII and IRG markers.

Garzón-Martínez GA, Osorio-Guarín JA, Delgadillo-Durán P, Mayorga F, Enciso-Rodríguez FE, Landsman D, Mariño-Ramírez L, Barrero LS.

Plant Gene. 2015 Dec 1;4:29-37.

18.

Genome Sequences of Multidrug-Resistant Salmonella enterica Serovar Paratyphi B (dT+) and Heidelberg Strains from the Colombian Poultry Chain.

Donado-Godoy P, Bernal JF, Rodríguez F, Gomez Y, Agarwala R, Landsman D, Mariño-Ramírez L.

Genome Announc. 2015 Oct 22;3(5). pii: e01265-15. doi: 10.1128/genomeA.01265-15.

19.

Sliding Motility, Biofilm Formation, and Glycopeptidolipid Production in Mycobacterium colombiense Strains.

Maya-Hoyos M, Leguizamón J, Mariño-Ramírez L, Soto CY.

Biomed Res Int. 2015;2015:419549. doi: 10.1155/2015/419549. Epub 2015 May 28.

20.

Genome Sequences of Vibrio navarrensis, a Potential Human Pathogen.

Gladney LM, Katz LS, Knipe KM, Rowe LA, Conley AB, Rishishwar L, Mariño-Ramírez L, Jordan IK, Tarr CL.

Genome Announc. 2014 Nov 20;2(6). pii: e01188-14. doi: 10.1128/genomeA.01188-14.

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