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Items: 1 to 20 of 170

1.

A mass spectrometry-based proteomic analysis of Homer2-interacting proteins in the mouse brain.

Goulding SP, Szumlinski KK, Contet C, MacCoss MJ, Wu CC.

J Proteomics. 2017 Jul 17. pii: S1874-3919(17)30242-7. doi: 10.1016/j.jprot.2017.07.008. [Epub ahead of print]

PMID:
28728878
2.

The Skyline ecosystem: Informatics for quantitative mass spectrometry proteomics.

Pino LK, Searle BC, Bollinger JG, Nunn B, MacLean B, MacCoss MJ.

Mass Spectrom Rev. 2017 Jul 9. doi: 10.1002/mas.21540. [Epub ahead of print] Review.

PMID:
28691345
3.

Proteomic analyses of nucleus laminaris identified candidate targets of the fragile X mental retardation protein.

Sakano H, Zorio DAR, Wang X, Ting YS, Noble WS, MacCoss MJ, Rubel EW, Wang Y.

J Comp Neurol. 2017 Jul 7. doi: 10.1002/cne.24281. [Epub ahead of print]

PMID:
28685837
4.

Combining 'omics and microscopy to visualize interactions between the Asian citrus psyllid vector and the Huanglongbing pathogen Candidatus Liberibacter asiaticus in the insect gut.

Kruse A, Fattah-Hosseini S, Saha S, Johnson R, Warwick E, Sturgeon K, Mueller L, MacCoss MJ, Shatters RG Jr, Cilia Heck M.

PLoS One. 2017 Jun 20;12(6):e0179531. doi: 10.1371/journal.pone.0179531. eCollection 2017.

5.

TCP4-dependent induction of CONSTANS transcription requires GIGANTEA in photoperiodic flowering in Arabidopsis.

Kubota A, Ito S, Shim JS, Johnson RS, Song YH, Breton G, Goralogia GS, Kwon MS, Laboy Cintrón D, Koyama T, Ohme-Takagi M, Pruneda-Paz JL, Kay SA, MacCoss MJ, Imaizumi T.

PLoS Genet. 2017 Jun 19;13(6):e1006856. doi: 10.1371/journal.pgen.1006856. eCollection 2017 Jun.

6.

Proteomics Analysis Identifies Orthologs of Human Chitinase-Like Proteins as Inducers of Tube Morphogenesis Defects in Drosophila melanogaster.

Zimmerman SG, Merrihew GE, MacCoss MJ, Berg CA.

Genetics. 2017 Jun;206(2):973-984. doi: 10.1534/genetics.116.199323. Epub 2017 Apr 12.

PMID:
28404605
7.

Automated Trapping Column Exchanger for High-Throughput Nanoflow Liquid Chromatography.

Spencer SE, Corso TN, Bollinger JG, Henderson CM, Hoofnagle AN, MacCoss MJ.

Anal Chem. 2017 Feb 21;89(4):2383-2389. doi: 10.1021/acs.analchem.6b04227. Epub 2017 Jan 30.

PMID:
28192907
8.

The Ndc80 complex bridges two Dam1 complex rings.

Kim JO, Zelter A, Umbreit NT, Bollozos A, Riffle M, Johnson R, MacCoss MJ, Asbury CL, Davis TN.

Elife. 2017 Feb 13;6. pii: e21069. doi: 10.7554/eLife.21069.

9.

Quantification by nano liquid chromatography parallel reaction monitoring mass spectrometry of human apolipoprotein A-I, apolipoprotein B, and hemoglobin A1c in dried blood spots.

Henderson CM, Bollinger JG, Becker JO, Wallace JM, Laha TJ, MacCoss MJ, Hoofnagle AN.

Proteomics Clin Appl. 2017 Jul;11(7-8). doi: 10.1002/prca.201600103. Epub 2017 Mar 6.

PMID:
28112871
10.

Computationally designed high specificity inhibitors delineate the roles of BCL2 family proteins in cancer.

Berger S, Procko E, Margineantu D, Lee EF, Shen BW, Zelter A, Silva DA, Chawla K, Herold MJ, Garnier JM, Johnson R, MacCoss MJ, Lessene G, Davis TN, Stayton PS, Stoddard BL, Fairlie WD, Hockenbery DM, Baker D.

Elife. 2016 Nov 2;5. pii: e20352. doi: 10.7554/eLife.20352.

11.

Model System-Guided Protein Interaction Mapping for Virus Isolated from Phloem Tissue.

DeBlasio SL, Johnson RS, MacCoss MJ, Gray SM, Cilia M.

J Proteome Res. 2016 Dec 2;15(12):4601-4611. Epub 2016 Nov 16.

PMID:
27762138
12.

An Automated Pipeline to Monitor System Performance in Liquid Chromatography-Tandem Mass Spectrometry Proteomic Experiments.

Bereman MS, Beri J, Sharma V, Nathe C, Eckels J, MacLean B, MacCoss MJ.

J Proteome Res. 2016 Dec 2;15(12):4763-4769. Epub 2016 Oct 4.

13.

Fast and Accurate Protein False Discovery Rates on Large-Scale Proteomics Data Sets with Percolator 3.0.

The M, MacCoss MJ, Noble WS, Käll L.

J Am Soc Mass Spectrom. 2016 Nov;27(11):1719-1727. Epub 2016 Aug 29.

14.

Staphylococcus aureus Protein A Mediates Interspecies Interactions at the Cell Surface of Pseudomonas aeruginosa.

Armbruster CR, Wolter DJ, Mishra M, Hayden HS, Radey MC, Merrihew G, MacCoss MJ, Burns J, Wozniak DJ, Parsek MR, Hoffman LR.

MBio. 2016 May 24;7(3). pii: e00538-16. doi: 10.1128/mBio.00538-16.

15.

The EARP Complex and Its Interactor EIPR-1 Are Required for Cargo Sorting to Dense-Core Vesicles.

Topalidou I, Cattin-Ortolá J, Pappas AL, Cooper K, Merrihew GE, MacCoss MJ, Ailion M.

PLoS Genet. 2016 May 18;12(5):e1006074. doi: 10.1371/journal.pgen.1006074. eCollection 2016 May.

16.

Mitochondrial-targeted catalase is good for the old mouse proteome, but not for the young: 'reverse' antagonistic pleiotropy?

Basisty N, Dai DF, Gagnidze A, Gitari L, Fredrickson J, Maina Y, Beyer RP, Emond MJ, Hsieh EJ, MacCoss MJ, Martin GM, Rabinovitch PS.

Aging Cell. 2016 Aug;15(4):634-45. doi: 10.1111/acel.12472. Epub 2016 Apr 8.

17.

Structure of γ-tubulin small complex based on a cryo-EM map, chemical cross-links, and a remotely related structure.

Greenberg CH, Kollman J, Zelter A, Johnson R, MacCoss MJ, Davis TN, Agard DA, Sali A.

J Struct Biol. 2016 Jun;194(3):303-10. doi: 10.1016/j.jsb.2016.03.006. Epub 2016 Mar 8.

18.

Using the CPTAC Assay Portal to Identify and Implement Highly Characterized Targeted Proteomics Assays.

Whiteaker JR, Halusa GN, Hoofnagle AN, Sharma V, MacLean B, Yan P, Wrobel JA, Kennedy J, Mani DR, Zimmerman LJ, Meyer MR, Mesri M, Boja E, Carr SA, Chan DW, Chen X, Chen J, Davies SR, Ellis MJ, Fenyö D, Hiltke T, Ketchum KA, Kinsinger C, Kuhn E, Liebler DC, Liu T, Loss M, MacCoss MJ, Qian WJ, Rivers R, Rodland KD, Ruggles KV, Scott MG, Smith RD, Thomas S, Townsend RR, Whiteley G, Wu C, Zhang H, Zhang Z, Rodriguez H, Paulovich AG.

Methods Mol Biol. 2016;1410:223-36. doi: 10.1007/978-1-4939-3524-6_13.

19.

Selecting Optimal Peptides for Targeted Proteomic Experiments in Human Plasma Using In Vitro Synthesized Proteins as Analytical Standards.

Bollinger JG, Stergachis AB, Johnson RS, Egertson JD, MacCoss MJ.

Methods Mol Biol. 2016;1410:207-21. doi: 10.1007/978-1-4939-3524-6_12.

PMID:
26867746
20.

Metabolic Interplay between the Asian Citrus Psyllid and Its Profftella Symbiont: An Achilles' Heel of the Citrus Greening Insect Vector.

Ramsey JS, Johnson RS, Hoki JS, Kruse A, Mahoney J, Hilf ME, Hunter WB, Hall DG, Schroeder FC, MacCoss MJ, Cilia M.

PLoS One. 2015 Nov 18;10(11):e0140826. doi: 10.1371/journal.pone.0140826. eCollection 2015.

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