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Items: 14

1.

Analyses of protein cores reveal fundamental differences between solution and crystal structures.

Mei Z, Treado JD, Grigas AT, Levine ZA, Regan L, O'Hern CS.

Proteins. 2020 Feb 27. doi: 10.1002/prot.25884. [Epub ahead of print]

PMID:
32105366
2.

Void distributions reveal structural link between jammed packings and protein cores.

Treado JD, Mei Z, Regan L, O'Hern CS.

Phys Rev E. 2019 Feb;99(2-1):022416. doi: 10.1103/PhysRevE.99.022416.

3.

A threonine zipper that mediates protein-protein interactions: Structure and prediction.

Oi C, Treado JD, Levine ZA, Lim CS, Knecht KM, Xiong Y, O'Hern CS, Regan L.

Protein Sci. 2018 Nov;27(11):1969-1977. doi: 10.1002/pro.3505.

4.

Promoting convergence: The integrated graduate program in physical and engineering biology at Yale University, a new model for graduate education.

Noble DB, Mochrie SG, O'Hern CS, Pollard TD, Regan L.

Biochem Mol Biol Educ. 2016 Nov 12;44(6):537-549. doi: 10.1002/bmb.20977. Epub 2016 Jun 13.

5.

Random close packing in protein cores.

Gaines JC, Smith WW, Regan L, O'Hern CS.

Phys Rev E. 2016 Mar;93(3):032415. doi: 10.1103/PhysRevE.93.032415. Epub 2016 Mar 28.

PMID:
27078398
6.

Understanding the physical basis for the side-chain conformational preferences of methionine.

Virrueta A, O'Hern CS, Regan L.

Proteins. 2016 Jul;84(7):900-11. doi: 10.1002/prot.25026. Epub 2016 Apr 6.

PMID:
26917446
7.

Equilibrium transitions between side-chain conformations in leucine and isoleucine.

Caballero D, Smith WW, O'Hern CS, Regan L.

Proteins. 2015 Aug;83(8):1488-99. doi: 10.1002/prot.24837.

PMID:
26018846
8.

Protein design: Past, present, and future.

Regan L, Caballero D, Hinrichsen MR, Virrueta A, Williams DM, O'Hern CS.

Biopolymers. 2015 Jul;104(4):334-50. doi: 10.1002/bip.22639. Review.

9.

Predicting the side-chain dihedral angle distributions of nonpolar, aromatic, and polar amino acids using hard sphere models.

Zhou AQ, O'Hern CS, Regan L.

Proteins. 2014 Oct;82(10):2574-84. doi: 10.1002/prot.24621. Epub 2014 Aug 11.

PMID:
24912976
10.

Intrinsic α-helical and β-sheet conformational preferences: a computational case study of alanine.

Caballero D, Määttä J, Zhou AQ, Sammalkorpi M, O'Hern CS, Regan L.

Protein Sci. 2014 Jul;23(7):970-80. doi: 10.1002/pro.2481. Epub 2014 May 9.

11.

New insights into the interdependence between amino acid stereochemistry and protein structure.

Zhou AQ, Caballero D, O'Hern CS, Regan L.

Biophys J. 2013 Nov 19;105(10):2403-11. doi: 10.1016/j.bpj.2013.09.018.

12.

The power of hard-sphere models: explaining side-chain dihedral angle distributions of Thr and Val.

Zhou AQ, O'Hern CS, Regan L.

Biophys J. 2012 May 16;102(10):2345-52. doi: 10.1016/j.bpj.2012.01.061. Epub 2012 May 15.

13.

Revisiting the Ramachandran plot from a new angle.

Zhou AQ, O'Hern CS, Regan L.

Protein Sci. 2011 Jul;20(7):1166-71. doi: 10.1002/pro.644. Epub 2011 May 31.

14.

Non-random-coil behavior as a consequence of extensive PPII structure in the denatured state.

Cortajarena AL, Lois G, Sherman E, O'Hern CS, Regan L, Haran G.

J Mol Biol. 2008 Sep 26;382(1):203-12. doi: 10.1016/j.jmb.2008.07.005. Epub 2008 Jul 11.

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