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Items: 1 to 20 of 43

1.

Erratum to: Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species.

Mathers TC, Chen Y, Kaithakottil G, Legeai F, Mugford ST, Baa-Puyoulet P, Bretaudeau A, Clavijo B, Colella S, Collin O, Dalmay T, Derrien T, Feng H, Gabaldón T, Jordan A, Julca I, Kettles GJ, Kowitwanich K, Lavenier D, Lenzi P, Lopez-Gomollon S, Loska D, Mapleson D, Maumus F, Moxon S, Price DR, Sugio A, van Munster M, Uzest M, Waite D, Jander G, Tagu D, Wilson AC, van Oosterhout C, Swarbreck D, Hogenhout SA.

Genome Biol. 2017 Apr 4;18(1):63. doi: 10.1186/s13059-017-1202-6. No abstract available.

2.

Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species.

Mathers TC, Chen Y, Kaithakottil G, Legeai F, Mugford ST, Baa-Puyoulet P, Bretaudeau A, Clavijo B, Colella S, Collin O, Dalmay T, Derrien T, Feng H, Gabaldón T, Jordan A, Julca I, Kettles GJ, Kowitwanich K, Lavenier D, Lenzi P, Lopez-Gomollon S, Loska D, Mapleson D, Maumus F, Moxon S, Price DR, Sugio A, van Munster M, Uzest M, Waite D, Jander G, Tagu D, Wilson AC, van Oosterhout C, Swarbreck D, Hogenhout SA.

Genome Biol. 2017 Feb 13;18(1):27. doi: 10.1186/s13059-016-1145-3. Erratum in: Genome Biol. 2017 Apr 4;18(1):63.

3.

Whole genome sequence of the soybean aphid, Aphis glycines.

Wenger JA, Cassone BJ, Legeai F, Johnston JS, Bansal R, Yates AD, Coates BS, Pavinato VA, Michel A.

Insect Biochem Mol Biol. 2017 Jan 22. pii: S0965-1748(17)30005-X. doi: 10.1016/j.ibmb.2017.01.005. [Epub ahead of print]

PMID:
28119199
4.

Long noncoding RNA repertoire in chicken liver and adipose tissue.

Muret K, Klopp C, Wucher V, Esquerré D, Legeai F, Lecerf F, Désert C, Boutin M, Jehl F, Acloque H, Giuffra E, Djebali S, Foissac S, Derrien T, Lagarrigue S.

Genet Sel Evol. 2017 Jan 10;49(1):6. doi: 10.1186/s12711-016-0275-0.

5.

FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome.

Wucher V, Legeai F, Hédan B, Rizk G, Lagoutte L, Leeb T, Jagannathan V, Cadieu E, David A, Lohi H, Cirera S, Fredholm M, Botherel N, Leegwater PAJ, Le Béguec C, Fieten H, Johnson J, Alföldi J, André C, Lindblad-Toh K, Hitte C, Derrien T.

Nucleic Acids Res. 2017 May 5;45(8):e57. doi: 10.1093/nar/gkw1306.

6.

Differential gene expression according to race and host plant in the pea aphid.

Eyres I, Jaquiéry J, Sugio A, Duvaux L, Gharbi K, Zhou JJ, Legeai F, Nelson M, Simon JC, Smadja CM, Butlin R, Ferrari J.

Mol Ecol. 2016 Sep;25(17):4197-215. doi: 10.1111/mec.13771. Epub 2016 Aug 26.

PMID:
27474484
7.

De novo transcriptome assembly of the grapevine phylloxera allows identification of genes differentially expressed between leaf- and root-feeding forms.

Rispe C, Legeai F, Papura D, Bretaudeau A, Hudaverdian S, Le Trionnaire G, Tagu D, Jaquiéry J, Delmotte F.

BMC Genomics. 2016 Mar 11;17:219. doi: 10.1186/s12864-016-2530-8.

8.

Differential expression of the chemosensory transcriptome in two populations of the stemborer Sesamia nonagrioides.

Glaser N, Gallot A, Legeai F, Harry M, Kaiser L, Le Ru B, Calatayud PA, Jacquin-Joly E.

Insect Biochem Mol Biol. 2015 Oct;65:28-34. doi: 10.1016/j.ibmb.2015.07.008. Epub 2015 Aug 24.

PMID:
26316282
9.

BioMAJ2Galaxy: automatic update of reference data in Galaxy using BioMAJ.

Bretaudeau A, Monjeaud C, Le Bras Y, Legeai F, Collin O.

Gigascience. 2015 May 9;4:22. doi: 10.1186/s13742-015-0063-8. eCollection 2015.

10.

Spodoptera frugiperda (Lepidoptera: Noctuidae) host-plant variants: two host strains or two distinct species?

Dumas P, Legeai F, Lemaitre C, Scaon E, Orsucci M, Labadie K, Gimenez S, Clamens AL, Henri H, Vavre F, Aury JM, Fournier P, Kergoat GJ, d'Alençon E.

Genetica. 2015 Jun;143(3):305-16. doi: 10.1007/s10709-015-9829-2. Epub 2015 Feb 19.

11.

Genetic control of contagious asexuality in the pea aphid.

Jaquiéry J, Stoeckel S, Larose C, Nouhaud P, Rispe C, Mieuzet L, Bonhomme J, Mahéo F, Legeai F, Gauthier JP, Prunier-Leterme N, Tagu D, Simon JC.

PLoS Genet. 2014 Dec 4;10(12):e1004838. doi: 10.1371/journal.pgen.1004838. eCollection 2014 Dec.

12.

Whole-genome re-sequencing of non-model organisms: lessons from unmapped reads.

Gouin A, Legeai F, Nouhaud P, Whibley A, Simon JC, Lemaitre C.

Heredity (Edinb). 2015 May;114(5):494-501. doi: 10.1038/hdy.2014.85. Epub 2014 Oct 1.

13.

Establishment and analysis of a reference transcriptome for Spodoptera frugiperda.

Legeai F, Gimenez S, Duvic B, Escoubas JM, Gosselin Grenet AS, Blanc F, Cousserans F, Séninet I, Bretaudeau A, Mutuel D, Girard PA, Monsempes C, Magdelenat G, Hilliou F, Feyereisen R, Ogliastro M, Volkoff AN, Jacquin-Joly E, d'Alençon E, Nègre N, Fournier P.

BMC Genomics. 2014 Aug 23;15:704. doi: 10.1186/1471-2164-15-704.

14.

Masculinization of the x chromosome in the pea aphid.

Jaquiéry J, Rispe C, Roze D, Legeai F, Le Trionnaire G, Stoeckel S, Mieuzet L, Da Silva C, Poulain J, Prunier-Leterme N, Ségurens B, Tagu D, Simon JC.

PLoS Genet. 2013;9(8):e1003690. doi: 10.1371/journal.pgen.1003690. Epub 2013 Aug 8.

15.

Candidate chemosensory genes in the Stemborer Sesamia nonagrioides.

Glaser N, Gallot A, Legeai F, Montagné N, Poivet E, Harry M, Calatayud PA, Jacquin-Joly E.

Int J Biol Sci. 2013 May 21;9(5):481-95. doi: 10.7150/ijbs.6109. Print 2013.

16.

A comparison of the olfactory gene repertoires of adults and larvae in the noctuid moth Spodoptera littoralis.

Poivet E, Gallot A, Montagné N, Glaser N, Legeai F, Jacquin-Joly E.

PLoS One. 2013;8(4):e60263. doi: 10.1371/journal.pone.0060263. Epub 2013 Apr 2.

17.

Genome scans reveal candidate regions involved in the adaptation to host plant in the pea aphid complex.

Jaquiéry J, Stoeckel S, Nouhaud P, Mieuzet L, Mahéo F, Legeai F, Bernard N, Bonvoisin A, Vitalis R, Simon JC.

Mol Ecol. 2012 Nov;21(21):5251-64. doi: 10.1111/mec.12048. Epub 2012 Sep 27.

PMID:
23017212
18.

Transcriptomic profiling of the reproductive mode switch in the pea aphid in response to natural autumnal photoperiod.

Le Trionnaire G, Jaubert-Possamai S, Bonhomme J, Gauthier JP, Guernec G, Le Cam A, Legeai F, Monfort J, Tagu D.

J Insect Physiol. 2012 Dec;58(12):1517-24. doi: 10.1016/j.jinsphys.2012.07.009. Epub 2012 Sep 9.

PMID:
22967755
19.

Candidate chemosensory genes in female antennae of the noctuid moth Spodoptera littoralis.

Jacquin-Joly E, Legeai F, Montagné N, Monsempes C, François MC, Poulain J, Gavory F, Walker WB 3rd, Hansson BS, Larsson MC.

Int J Biol Sci. 2012;8(7):1036-50. doi: 10.7150/ijbs.4469. Epub 2012 Aug 10.

20.

TriAnnot: A Versatile and High Performance Pipeline for the Automated Annotation of Plant Genomes.

Leroy P, Guilhot N, Sakai H, Bernard A, Choulet F, Theil S, Reboux S, Amano N, Flutre T, Pelegrin C, Ohyanagi H, Seidel M, Giacomoni F, Reichstadt M, Alaux M, Gicquello E, Legeai F, Cerutti L, Numa H, Tanaka T, Mayer K, Itoh T, Quesneville H, Feuillet C.

Front Plant Sci. 2012 Jan 31;3:5. doi: 10.3389/fpls.2012.00005. eCollection 2012.

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