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Items: 18

1.

Structural models for the design of novel antiviral agents against Greek Goat Encephalitis.

Papageorgiou L, Loukatou S, Koumandou VL, Makałowski W, Megalooikonomou V, Vlachakis D, Kossida S.

PeerJ. 2014 Nov 6;2:e664. doi: 10.7717/peerj.664.

2.

Evolution of the F0F1 ATP synthase complex in light of the patchy distribution of different bioenergetic pathways across prokaryotes.

Koumandou VL, Kossida S.

PLoS Comput Biol. 2014 Sep 4;10(9):e1003821. doi: 10.1371/journal.pcbi.1003821.

3.

Frequent gene fissions associated with human pathogenic bacteria.

Karamichali I, Koumandou VL, Karagouni AD, Kossida S.

Genomics. 2014 Jan;103(1):65-75. doi: 10.1016/j.ygeno.2014.02.001.

4.

The streamlined genome of Phytomonas spp. relative to human pathogenic kinetoplastids reveals a parasite tailored for plants.

Porcel BM, Denoeud F, Opperdoes F, Noel B, Madoui MA, Hammarton TC, Field MC, Da Silva C, Couloux A, Poulain J, Katinka M, Jabbari K, Aury JM, Campbell DA, Cintron R, Dickens NJ, Docampo R, Sturm NR, Koumandou VL, Fabre S, Flegontov P, Lukeš J, Michaeli S, Mottram JC, Szöőr B, Zilberstein D, Bringaud F, Wincker P, Dollet M.

PLoS Genet. 2014 Feb 6;10(2):e1004007. doi: 10.1371/journal.pgen.1004007.

5.

Molecular paleontology and complexity in the last eukaryotic common ancestor.

Koumandou VL, Wickstead B, Ginger ML, van der Giezen M, Dacks JB, Field MC.

Crit Rev Biochem Mol Biol. 2013 Jul-Aug;48(4):373-96. doi: 10.3109/10409238.2013.821444. Review.

6.

Gene fusion analysis in the battle against the African endemic sleeping sickness.

Trimpalis P, Koumandou VL, Pliakou E, Anagnou NP, Kossida S.

PLoS One. 2013 Jul 17;8(7):e68854. doi: 10.1371/journal.pone.0068854.

7.

Evolution of the plasma and tissue kallikreins, and their alternative splicing isoforms.

Koumandou VL, Scorilas A.

PLoS One. 2013 Jul 10;8(7):e68074. doi: 10.1371/journal.pone.0068074.

8.
9.

Evidence for recycling of invariant surface transmembrane domain proteins in African trypanosomes.

Koumandou VL, Boehm C, Horder KA, Field MC.

Eukaryot Cell. 2013 Feb;12(2):330-42. doi: 10.1128/EC.00273-12.

10.

SAFE Software and FED Database to Uncover Protein-Protein Interactions using Gene Fusion Analysis.

Tsagrasoulis D, Danos V, Kissa M, Trimpalis P, Koumandou VL, Karagouni AD, Tsakalidis A, Kossida S.

Evol Bioinform Online. 2012;8:47-60. doi: 10.4137/EBO.S8018.

11.

Protein functional links in Trypanosoma brucei, identified by gene fusion analysis.

Dimitriadis D, Koumandou VL, Trimpalis P, Kossida S.

BMC Evol Biol. 2011 Jul 5;11:193. doi: 10.1186/1471-2148-11-193.

12.

Evolutionary reconstruction of the retromer complex and its function in Trypanosoma brucei.

Koumandou VL, Klute MJ, Herman EK, Nunez-Miguel R, Dacks JB, Field MC.

J Cell Sci. 2011 May 1;124(Pt 9):1496-509. doi: 10.1242/jcs.081596.

13.

The trypanosome transcriptome is remodelled during differentiation but displays limited responsiveness within life stages.

Koumandou VL, Natesan SK, Sergeenko T, Field MC.

BMC Genomics. 2008 Jun 23;9:298. doi: 10.1186/1471-2164-9-298.

14.

Intracellular trafficking in the trypanosomatids.

Field MC, Natesan SK, Gabernet-Castello C, Koumandou VL.

Traffic. 2007 Jun;8(6):629-39. Review.

15.
17.

Dinoflagellate chloroplasts--where have all the genes gone?

Koumandou VL, Nisbet RE, Barbrook AC, Howe CJ.

Trends Genet. 2004 May;20(5):261-7. Review. No abstract available. Erratum in: Trends Genet. 2005 Jan;21(1):36.

PMID:
15109781
18.

Evolution of the chloroplast genome.

Howe CJ, Barbrook AC, Koumandou VL, Nisbet RE, Symington HA, Wightman TF.

Philos Trans R Soc Lond B Biol Sci. 2003 Jan 29;358(1429):99-106; discussion 106-7. Review.

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