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Items: 1 to 20 of 153

1.

The Hippo kinases LATS1 and 2 control human breast cell fate via crosstalk with ERα.

Britschgi A, Duss S, Kim S, Couto JP, Brinkhaus H, Koren S, De Silva D, Mertz KD, Kaup D, Varga Z, Voshol H, Vissieres A, Leroy C, Roloff T, Stadler MB, Scheel CH, Miraglia LJ, Orth AP, Bonamy GM, Reddy VA, Bentires-Alj M.

Nature. 2017 Jan 9. doi: 10.1038/nature20829. [Epub ahead of print]

PMID:
28068668
2.

Protocol for Microplastics Sampling on the Sea Surface and Sample Analysis.

Kovač Viršek M, Palatinus A, Koren Š, Peterlin M, Horvat P, Kržan A.

J Vis Exp. 2016 Dec 16;(118). doi: 10.3791/55161.

PMID:
28060297
3.

SU-F-T-21: A Novel Beam-Light View, Collimating Applicator for HDR Ocular Conjunctiva Brachytherapy-Treatments.

Koren S, Kindler J, Tafo AG, Cohen G, Reich E.

Med Phys. 2016 Jun;43(6):3466. doi: 10.1118/1.4956156.

PMID:
28048847
4.

The effects of electromagnetic fields on B16-BL6 cells are dependent on their spatial and temporal character.

Buckner CA, Buckner AL, Koren SA, Persinger MA, Lafrenie RM.

Bioelectromagnetics. 2016 Dec 27. doi: 10.1002/bem.22031. [Epub ahead of print]

PMID:
28026051
5.

Complete Genome Sequence of a Bovine Viral Diarrhea Virus Subgenotype 1e Strain, SLO/2407/2006, Isolated in Slovenia.

Toplak I, Kuhar U, Kušar D, Papić B, Koren S, Toplak N.

Genome Announc. 2016 Nov 17;4(6). pii: e01310-16. doi: 10.1128/genomeA.01310-16.

6.

Diversity in a Polymicrobial Community Revealed by Analysis of Viromes, Endolysins and CRISPR Spacers.

Davison M, Treangen TJ, Koren S, Pop M, Bhaya D.

PLoS One. 2016 Sep 9;11(9):e0160574. doi: 10.1371/journal.pone.0160574.

7.

Mash: fast genome and metagenome distance estimation using MinHash.

Ondov BD, Treangen TJ, Melsted P, Mallonee AB, Bergman NH, Koren S, Phillippy AM.

Genome Biol. 2016 Jun 20;17(1):132. doi: 10.1186/s13059-016-0997-x.

8.

The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts.

Liu Z, Liu S, Yao J, Bao L, Zhang J, Li Y, Jiang C, Sun L, Wang R, Zhang Y, Zhou T, Zeng Q, Fu Q, Gao S, Li N, Koren S, Jiang Y, Zimin A, Xu P, Phillippy AM, Geng X, Song L, Sun F, Li C, Wang X, Chen A, Jin Y, Yuan Z, Yang Y, Tan S, Peatman E, Lu J, Qin Z, Dunham R, Li Z, Sonstegard T, Feng J, Danzmann RG, Schroeder S, Scheffler B, Duke MV, Ballard L, Kucuktas H, Kaltenboeck L, Liu H, Armbruster J, Xie Y, Kirby ML, Tian Y, Flanagan ME, Mu W, Waldbieser GC.

Nat Commun. 2016 Jun 2;7:11757. doi: 10.1038/ncomms11757.

9.

Complete Genome Sequence of the Porcine Epidemic Diarrhea Virus Strain SLO/JH-11/2015.

Toplak I, Ipavec M, Kuhar U, Kušar D, Papić B, Koren S, Toplak N.

Genome Announc. 2016 Apr 7;4(2). pii: e01725-15. doi: 10.1128/genomeA.01725-15.

10.

Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes.

Hall AB, Papathanos PA, Sharma A, Cheng C, Akbari OS, Assour L, Bergman NH, Cagnetti A, Crisanti A, Dottorini T, Fiorentini E, Galizi R, Hnath J, Jiang X, Koren S, Nolan T, Radune D, Sharakhova MV, Steele A, Timoshevskiy VA, Windbichler N, Zhang S, Hahn MW, Phillippy AM, Emrich SJ, Sharakhov IV, Tu ZJ, Besansky NJ.

Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):E2114-23. doi: 10.1073/pnas.1525164113.

11.

Brachytherapy for radiotherapy-resistant head and neck cancer: A review of a single center experience.

Hazkani I, Rabinovics N, Limon D, Silvern D, Koren S, Hadar T, Bachar G, Shpitzer T, Popovtzer A.

Laryngoscope. 2016 Oct;126(10):2246-51. doi: 10.1002/lary.25938.

PMID:
26928864
12.

Genomic insights into the Ixodes scapularis tick vector of Lyme disease.

Gulia-Nuss M, Nuss AB, Meyer JM, Sonenshine DE, Roe RM, Waterhouse RM, Sattelle DB, de la Fuente J, Ribeiro JM, Megy K, Thimmapuram J, Miller JR, Walenz BP, Koren S, Hostetler JB, Thiagarajan M, Joardar VS, Hannick LI, Bidwell S, Hammond MP, Young S, Zeng Q, Abrudan JL, Almeida FC, Ayllón N, Bhide K, Bissinger BW, Bonzon-Kulichenko E, Buckingham SD, Caffrey DR, Caimano MJ, Croset V, Driscoll T, Gilbert D, Gillespie JJ, Giraldo-Calderón GI, Grabowski JM, Jiang D, Khalil SM, Kim D, Kocan KM, Koči J, Kuhn RJ, Kurtti TJ, Lees K, Lang EG, Kennedy RC, Kwon H, Perera R, Qi Y, Radolf JD, Sakamoto JM, Sánchez-Gracia A, Severo MS, Silverman N, Šimo L, Tojo M, Tornador C, Van Zee JP, Vázquez J, Vieira FG, Villar M, Wespiser AR, Yang Y, Zhu J, Arensburger P, Pietrantonio PV, Barker SC, Shao R, Zdobnov EM, Hauser F, Grimmelikhuijzen CJ, Park Y, Rozas J, Benton R, Pedra JH, Nelson DR, Unger MF, Tubio JM, Tu Z, Robertson HM, Shumway M, Sutton G, Wortman JR, Lawson D, Wikel SK, Nene VM, Fraser CM, Collins FH, Birren B, Nelson KE, Caler E, Hill CA.

Nat Commun. 2016 Feb 9;7:10507. doi: 10.1038/ncomms10507.

13.

Breast Tumor Heterogeneity: Source of Fitness, Hurdle for Therapy.

Koren S, Bentires-Alj M.

Mol Cell. 2015 Nov 19;60(4):537-46. doi: 10.1016/j.molcel.2015.10.031. Review.

14.

Corrigendum: Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.

Berlin K, Koren S, Chin CS, Drake JP, Landolin JM, Phillippy AM.

Nat Biotechnol. 2015 Oct;33(10):1109. doi: 10.1038/nbt1015-1109c. No abstract available.

PMID:
26448093
15.

Draft Genome Sequences of Dickeya sp. Isolates B16 (NIB Z 2098) and S1 (NIB Z 2099) Causing Soft Rot of Phalaenopsis Orchids.

Alič Š, Naglič T, Llop P, Toplak N, Koren S, Ravnikar M, Dreo T.

Genome Announc. 2015 Sep 10;3(5). pii: e00973-15. doi: 10.1128/genomeA.00973-15.

16.

PIK3CA(H1047R) induces multipotency and multi-lineage mammary tumours.

Koren S, Reavie L, Couto JP, De Silva D, Stadler MB, Roloff T, Britschgi A, Eichlisberger T, Kohler H, Aina O, Cardiff RD, Bentires-Alj M.

Nature. 2015 Sep 3;525(7567):114-8. doi: 10.1038/nature14669.

PMID:
26266975
17.
18.

The Use of Complementary and Alternative Medicine in Hospitalized Patients with Type 2 Diabetes Mellitus in Israel.

Koren R, Lerner A, Tirosh A, Zaidenstein R, Ziv-Baran T, Golik A, Koren S.

J Altern Complement Med. 2015 Jul;21(7):395-400. doi: 10.1089/acm.2015.0019.

PMID:
26052873
19.

Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.

Berlin K, Koren S, Chin CS, Drake JP, Landolin JM, Phillippy AM.

Nat Biotechnol. 2015 Jun;33(6):623-30. doi: 10.1038/nbt.3238. Erratum in: Nat Biotechnol. 2015 Oct;33(10):1109.

PMID:
26006009
20.

Inhibition of cancer cell growth by exposure to a specific time-varying electromagnetic field involves T-type calcium channels.

Buckner CA, Buckner AL, Koren SA, Persinger MA, Lafrenie RM.

PLoS One. 2015 Apr 14;10(4):e0124136. doi: 10.1371/journal.pone.0124136.

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