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Items: 1 to 20 of 42

1.

White paper on the study of birth defects.

Khokha MK, Mitchell LE, Wallingford JB.

Birth Defects Res. 2017 Jan 30;109(2):180-185. doi: 10.1002/bdra.23590. Epub 2017 Jan 27.

PMID:
28398650
2.

Analysis of Craniocardiac Malformations in Xenopus using Optical Coherence Tomography.

Deniz E, Jonas S, Hooper M, N Griffin J, Choma MA, Khokha MK.

Sci Rep. 2017 Feb 14;7:42506. doi: 10.1038/srep42506.

3.

An opportunity to address the genetic causes of birth defects.

Khokha MK, Mitchell LE, Wallingford JB.

Pediatr Res. 2017 Feb;81(2):282-285. doi: 10.1038/pr.2016.229. Epub 2016 Nov 3. No abstract available.

PMID:
27925620
4.

Ultrahigh-speed, phase-sensitive full-field interferometric confocal microscopy for quantitative microscale physiology.

Sencan I, Huang BK, Bian Y, Mis E, Khokha MK, Cao H, Choma M.

Biomed Opt Express. 2016 Oct 20;7(11):4674-4684. eCollection 2016 Nov 1.

5.

Expression of ribosomopathy genes during Xenopus tropicalis embryogenesis.

Robson A, Owens ND, Baserga SJ, Khokha MK, Griffin JN.

BMC Dev Biol. 2016 Oct 26;16(1):38.

6.

Congenital Heart Disease Genetics Uncovers Context-Dependent Organization and Function of Nucleoporins at Cilia.

Del Viso F, Huang F, Myers J, Chalfant M, Zhang Y, Reza N, Bewersdorf J, Lusk CP, Khokha MK.

Dev Cell. 2016 Sep 12;38(5):478-92. doi: 10.1016/j.devcel.2016.08.002. Epub 2016 Sep 1.

PMID:
27593162
7.

Codon identity regulates mRNA stability and translation efficiency during the maternal-to-zygotic transition.

Bazzini AA, Del Viso F, Moreno-Mateos MA, Johnstone TG, Vejnar CE, Qin Y, Yao J, Khokha MK, Giraldez AJ.

EMBO J. 2016 Oct 4;35(19):2087-2103. Epub 2016 Jul 19.

PMID:
27436874
8.

Developmentally regulated long non-coding RNAs in Xenopus tropicalis.

Forouzmand E, Owens ND, Blitz IL, Paraiso KD, Khokha MK, Gilchrist MJ, Xie X, Cho KW.

Dev Biol. 2016 Jul 12. pii: S0012-1606(16)30120-8. doi: 10.1016/j.ydbio.2016.06.016. [Epub ahead of print]

9.

Nucleoporin gene expression in Xenopus tropicalis embryonic development.

Reza N, Khokha MK, Del Viso F.

Int J Dev Biol. 2016;60(4-6):181-8. doi: 10.1387/ijdb.150317nr.

PMID:
27389988
10.

Erratum: Particle streak velocimetry-optical coherence tomography: a novel method for multidimensional imaging of microscale fluid flows: erratum.

Zhou KC, Huang BK, Gamm UA, Bhandari V, Khokha MK, Choma MA.

Biomed Opt Express. 2016 May 23;7(6):2360-1. doi: 10.1364/BOE.7.002360. eCollection 2016 Jun 1.

11.

Particle streak velocimetry-optical coherence tomography: a novel method for multidimensional imaging of microscale fluid flows.

Zhou KC, Huang BK, Gamm UA, Bhandari V, Khokha MK, Choma MA.

Biomed Opt Express. 2016 Mar 30;7(4):1590-603. doi: 10.1364/BOE.7.001590. eCollection 2016 Apr 1. Erratum in: Biomed Opt Express. 2016 Jun 1;7(6):2360-1.

12.

Xenopus as a model organism for birth defects-Congenital heart disease and heterotaxy.

Duncan AR, Khokha MK.

Semin Cell Dev Biol. 2016 Mar;51:73-9. doi: 10.1016/j.semcdb.2016.02.022. Epub 2016 Feb 22. Review.

13.

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development.

Owens ND, Blitz IL, Lane MA, Patrushev I, Overton JD, Gilchrist MJ, Cho KW, Khokha MK.

Cell Rep. 2016 Jan 26;14(3):632-47. doi: 10.1016/j.celrep.2015.12.050. Epub 2016 Jan 7.

14.

CRISPR/Cas9: An inexpensive, efficient loss of function tool to screen human disease genes in Xenopus.

Bhattacharya D, Marfo CA, Li D, Lane M, Khokha MK.

Dev Biol. 2015 Dec 15;408(2):196-204. doi: 10.1016/j.ydbio.2015.11.003. Epub 2015 Nov 4.

15.

Three-dimensional, three-vector-component velocimetry of cilia-driven fluid flow using correlation-based approaches in optical coherence tomography.

Huang BK, Gamm UA, Bhandari V, Khokha MK, Choma MA.

Biomed Opt Express. 2015 Aug 24;6(9):3515-38. doi: 10.1364/BOE.6.003515. eCollection 2015 Sep 1.

16.

CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo.

Moreno-Mateos MA, Vejnar CE, Beaudoin JD, Fernandez JP, Mis EK, Khokha MK, Giraldez AJ.

Nat Methods. 2015 Oct;12(10):982-8. doi: 10.1038/nmeth.3543. Epub 2015 Aug 31.

17.

The ribosome biogenesis factor Nol11 is required for optimal rDNA transcription and craniofacial development in Xenopus.

Griffin JN, Sondalle SB, Del Viso F, Baserga SJ, Khokha MK.

PLoS Genet. 2015 Mar 10;11(3):e1005018. doi: 10.1371/journal.pgen.1005018. eCollection 2015 Mar.

18.

Quantitative optical coherence tomography imaging of intermediate flow defect phenotypes in ciliary physiology and pathophysiology.

Huang BK, Gamm UA, Jonas S, Khokha MK, Choma MA.

J Biomed Opt. 2015 Mar;20(3):030502. doi: 10.1117/1.JBO.20.3.030502.

19.

Mutation of NLRC4 causes a syndrome of enterocolitis and autoinflammation.

Romberg N, Al Moussawi K, Nelson-Williams C, Stiegler AL, Loring E, Choi M, Overton J, Meffre E, Khokha MK, Huttner AJ, West B, Podoltsev NA, Boggon TJ, Kazmierczak BI, Lifton RP.

Nat Genet. 2014 Oct;46(10):1135-9. doi: 10.1038/ng.3066. Epub 2014 Sep 14.

20.

The heterotaxy gene GALNT11 glycosylates Notch to orchestrate cilia type and laterality.

Boskovski MT, Yuan S, Pedersen NB, Goth CK, Makova S, Clausen H, Brueckner M, Khokha MK.

Nature. 2013 Dec 19;504(7480):456-9. doi: 10.1038/nature12723. Epub 2013 Nov 13.

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