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Items: 11

1.

Targeted capture and sequencing of gene-sized DNA molecules.

Giolai M, Paajanen P, Verweij W, Percival-Alwyn L, Baker D, Witek K, Jupe F, Bryan G, Hein I, Jones JD, Clark MD.

Biotechniques. 2016 Dec 1;61(6):315-322.

2.

Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions.

Kawakatsu T, Huang SS, Jupe F, Sasaki E, Schmitz RJ, Urich MA, Castanon R, Nery JR, Barragan C, He Y, Chen H, Dubin M, Lee CR, Wang C, Bemm F, Becker C, O'Neil R, O'Malley RC, Quarless DX; 1001 Genomes Consortium., Schork NJ, Weigel D, Nordborg M, Ecker JR.

Cell. 2016 Jul 14;166(2):492-505. doi: 10.1016/j.cell.2016.06.044.

PMID:
27419873
3.

Accelerated cloning of a potato late blight-resistance gene using RenSeq and SMRT sequencing.

Witek K, Jupe F, Witek AI, Baker D, Clark MD, Jones JD.

Nat Biotechnol. 2016 Jun;34(6):656-60. doi: 10.1038/nbt.3540.

PMID:
27111721
4.

NLR-parser: rapid annotation of plant NLR complements.

Steuernagel B, Jupe F, Witek K, Jones JD, Wulff BB.

Bioinformatics. 2015 May 15;31(10):1665-7. doi: 10.1093/bioinformatics/btv005.

6.

Defining the full tomato NB-LRR resistance gene repertoire using genomic and cDNA RenSeq.

Andolfo G, Jupe F, Witek K, Etherington GJ, Ercolano MR, Jones JD.

BMC Plant Biol. 2014 May 5;14:120. doi: 10.1186/1471-2229-14-120.

7.

Genomic DNA library preparation for resistance gene enrichment and sequencing (RenSeq) in plants.

Jupe F, Chen X, Verweij W, Witek K, Jones JD, Hein I.

Methods Mol Biol. 2014;1127:291-303. doi: 10.1007/978-1-62703-986-4_22.

PMID:
24643569
8.

Elevating crop disease resistance with cloned genes.

Jones JD, Witek K, Verweij W, Jupe F, Cooke D, Dorling S, Tomlinson L, Smoker M, Perkins S, Foster S.

Philos Trans R Soc Lond B Biol Sci. 2014 Feb 17;369(1639):20130087. doi: 10.1098/rstb.2013.0087.

9.

Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations.

Jupe F, Witek K, Verweij W, Sliwka J, Pritchard L, Etherington GJ, Maclean D, Cock PJ, Leggett RM, Bryan GJ, Cardle L, Hein I, Jones JD.

Plant J. 2013 Nov;76(3):530-44. doi: 10.1111/tpj.12307.

10.

Identification and localisation of the NB-LRR gene family within the potato genome.

Jupe F, Pritchard L, Etherington GJ, Mackenzie K, Cock PJ, Wright F, Sharma SK, Bolser D, Bryan GJ, Jones JD, Hein I.

BMC Genomics. 2012 Feb 15;13:75. doi: 10.1186/1471-2164-13-75.

11.

Lichenification.

Weber FP, Jupe F.

Proc R Soc Med. 1935 Mar;28(5):510-1. No abstract available.

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