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Items: 1 to 20 of 51

1.

Adaptive Strategies in a Poly-Extreme Environment: Differentiation of Vegetative Cells in Serratia ureilytica and Resistance to Extreme Conditions.

Filippidou S, Junier T, Wunderlin T, Kooli WM, Palmieri I, Al-Dourobi A, Molina V, Lienhard R, Spangenberg JE, Johnson SL, Chain PSG, Dorador C, Junier P.

Front Microbiol. 2019 Feb 5;10:102. doi: 10.3389/fmicb.2019.00102. eCollection 2019.

2.

Bacterial spores, from ecology to biotechnology.

Paul C, Filippidou S, Jamil I, Kooli W, House GL, Estoppey A, Hayoz M, Junier T, Palmieri F, Wunderlin T, Lehmann A, Bindschedler S, Vennemann T, Chain PSG, Junier P.

Adv Appl Microbiol. 2019;106:79-111. doi: 10.1016/bs.aambs.2018.10.002. Epub 2018 Nov 27.

PMID:
30798805
3.

Remedial Treatment of Corroded Iron Objects by Environmental Aeromonas Isolates.

Kooli WM, Junier T, Shakya M, Monachon M, Davenport KW, Vaideeswaran K, Vernudachi A, Marozau I, Monrouzeau T, Gleasner CD, McMurry K, Lienhard R, Rufener L, Perret JL, Sereda O, Chain PS, Joseph E, Junier P.

Appl Environ Microbiol. 2019 Jan 23;85(3). pii: e02042-18. doi: 10.1128/AEM.02042-18. Print 2019 Feb 1.

4.

Dissemination of antibiotic resistance genes associated with the sporobiota in sediments impacted by wastewater.

Paul C, Bayrychenko Z, Junier T, Filippidou S, Beck K, Bueche M, Greub G, Bürgmann H, Junier P.

PeerJ. 2018 Jun 20;6:e4989. doi: 10.7717/peerj.4989. eCollection 2018.

5.

Detection of novel astroviruses MLB1 and MLB2 in the sera of febrile Tanzanian children.

Cordey S, Hartley MA, Keitel K, Laubscher F, Brito F, Junier T, Kagoro F, Samaka J, Masimba J, Said Z, Temba H, Mlaganile T, Docquier M, Fellay J, Kaiser L, D'Acremont V.

Emerg Microbes Infect. 2018 Mar 14;7(1):27. doi: 10.1038/s41426-018-0025-1. No abstract available.

6.

A historical legacy of antibiotic utilization on bacterial seed banks in sediments.

Madueño L, Paul C, Junier T, Bayrychenko Z, Filippidou S, Beck K, Greub G, Bürgmann H, Junier P.

PeerJ. 2018 Jan 3;6:e4197. doi: 10.7717/peerj.4197. eCollection 2018.

7.

Severe viral respiratory infections in children with IFIH1 loss-of-function mutations.

Asgari S, Schlapbach LJ, Anchisi S, Hammer C, Bartha I, Junier T, Mottet-Osman G, Posfay-Barbe KM, Longchamp D, Stocker M, Cordey S, Kaiser L, Riedel T, Kenna T, Long D, Schibler A, Telenti A, Tapparel C, McLaren PJ, Garcin D, Fellay J.

Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):8342-8347. doi: 10.1073/pnas.1704259114. Epub 2017 Jul 17.

8.

A Combination of Extreme Environmental Conditions Favor the Prevalence of Endospore-Forming Firmicutes.

Filippidou S, Wunderlin T, Junier T, Jeanneret N, Dorador C, Molina V, Johnson DR, Junier P.

Front Microbiol. 2016 Nov 3;7:1707. eCollection 2016.

9.

MAR-Mediated transgene integration into permissive chromatin and increased expression by recombination pathway engineering.

Kostyrko K, Neuenschwander S, Junier T, Regamey A, Iseli C, Schmid-Siegert E, Bosshard S, Majocchi S, Le Fourn V, Girod PA, Xenarios I, Mermod N.

Biotechnol Bioeng. 2017 Feb;114(2):384-396. doi: 10.1002/bit.26086. Epub 2016 Oct 3.

10.

Contribution of Genetic Background and Clinical Risk Factors to Low-Trauma Fractures in Human Immunodeficiency Virus (HIV)-Positive Persons: The Swiss HIV Cohort Study.

Junier T, Rotger M, Biver E, Ledergerber B, Barceló C, Bartha I, Kovari H, Schmid P, Fux C, Bernasconi E, Brun Del Re C, Weber R, Fellay J, Tarr PE.

Open Forum Infect Dis. 2016 May 18;3(2):ofw101. doi: 10.1093/ofid/ofw101. eCollection 2016 Apr.

11.

Anoxybacillusgeothermalis sp. nov., a facultatively anaerobic, endospore-forming bacterium isolated from mineral deposits in a geothermal station.

Filippidou S, Jaussi M, Junier T, Wunderlin T, Jeanneret N, Palmieri F, Palmieri I, Roussel-Delif L, Vieth-Hillebrand A, Vetter A, Chain PS, Regenspurg S, Junier P.

Int J Syst Evol Microbiol. 2016 Aug;66(8):2944-51. doi: 10.1099/ijsem.0.001125. Epub 2016 Apr 28.

PMID:
27126386
12.

Physical Isolation of Endospores from Environmental Samples by Targeted Lysis of Vegetative Cells.

Wunderlin T, Junier T, Paul C, Jeanneret N, Junier P.

J Vis Exp. 2016 Jan 21;(107):e53411. doi: 10.3791/53411.

13.

Diversity and ecology of oxalotrophic bacteria.

Hervé V, Junier T, Bindschedler S, Verrecchia E, Junier P.

World J Microbiol Biotechnol. 2016 Feb;32(2):28. doi: 10.1007/s11274-015-1982-3. Epub 2016 Jan 9. Review.

PMID:
26748805
14.

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases.

SIB Swiss Institute of Bioinformatics Members.

Nucleic Acids Res. 2016 Jan 4;44(D1):D27-37. doi: 10.1093/nar/gkv1310. Epub 2015 Nov 28.

15.

CEGA--a catalog of conserved elements from genomic alignments.

Dousse A, Junier T, Zdobnov EM.

Nucleic Acids Res. 2016 Jan 4;44(D1):D96-100. doi: 10.1093/nar/gkv1163. Epub 2015 Nov 2.

16.

Genome Sequence of Bacillus alveayuensis Strain 24KAM51, a Halotolerant Thermophile Isolated from a Hydrothermal Vent.

Filippidou S, Wunderlin T, Junier T, Jeanneret N, Johnson S, McMurry K, Gleasner CD, Lo CC, Li PE, Vuyisich M, Chain PS, Junier P.

Genome Announc. 2015 Aug 27;3(4). pii: e00982-15. doi: 10.1128/genomeA.00982-15.

17.

Genome Sequence of Aeribacillus pallidus Strain GS3372, an Endospore-Forming Bacterium Isolated in a Deep Geothermal Reservoir.

Filippidou S, Jaussi M, Junier T, Wunderlin T, Jeanneret N, Regenspurg S, Li PE, Lo CC, Johnson S, McMurry K, Gleasner CD, Vuyisich M, Chain PS, Junier P.

Genome Announc. 2015 Aug 27;3(4). pii: e00981-15. doi: 10.1128/genomeA.00981-15.

18.

MLgsc: A Maximum-Likelihood General Sequence Classifier.

Junier T, Hervé V, Wunderlin T, Junier P.

PLoS One. 2015 Jul 6;10(7):e0129384. doi: 10.1371/journal.pone.0129384. eCollection 2015.

19.

Genome Sequence of Anoxybacillus geothermalis Strain GSsed3, a Novel Thermophilic Endospore-Forming Species.

Filippidou S, Jaussi M, Junier T, Wunderlin T, Roussel-Delif L, Jeanneret N, Vieth-Hillebrand A, Vetter A, Regenspurg S, Johnson SL, McMurry K, Gleasner CD, Lo CC, Li P, Vuyisich M, Chain PS, Junier P.

Genome Announc. 2015 Jun 11;3(3). pii: e00575-15. doi: 10.1128/genomeA.00575-15.

20.

Under-detection of endospore-forming Firmicutes in metagenomic data.

Filippidou S, Junier T, Wunderlin T, Lo CC, Li PE, Chain PS, Junier P.

Comput Struct Biotechnol J. 2015 Apr 25;13:299-306. doi: 10.1016/j.csbj.2015.04.002. eCollection 2015.

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